iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mpu-066684

Ensembl Protein ID

ENSMPUP00000004301.1

UniProt Accession

M3XZ00; M3XZ00_MUSPF

Genbank Protein ID

ENSMPUP00000004301

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEYP01024428

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMPUG00000004334.1	ENSMPUT00000004377.1	ENSMPUP00000004301.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	6.50e-21	73.8	162	201
ULD/UDP/UBQ/UBQ_PIM	2.80e-26	91.3	3	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 162  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 201
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t+ktl++++f++++++d+tv+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +++++ i+++++v+++v+k+k
   Q: 3    VTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGrdaFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKAK 80
           68*************************************************************************987 PP

Organism

Mustela putorius furo

Protein Sequence
(Fasta)

MAVTITLKTL QQQTFKIRME PDETVKVLKE KIEAEKGRDA FPVAGQKLIY AGKILSDDVP 60
IRDYRIDEKN FVVVMVTKAK TSPGTSVPPE ASPTAAPESS TSFPPAPASG MSHPPPTARE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTCA CCATCACGCT CAAAACGCTG CAGCAGCAGA CCTTCAAAAT CCGCATGGAG 60
CCTGACGAGA CGGTGGGAGC TGGACCGAAG CCCGGGAGTG GGAACGACGG GTGCCGGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001515	Ailuropoda melanoleuca	95.26	4.00e-149	520.00
IUUC-Aca-004704	Anolis carolinensis	78.21	2.00e-110	392.00
IUUC-Aly-006159	Arabidopsis lyrata	35.34	8.00e-51	194.00
IUUC-Ago-007830	Ashbya gossypii	27.09	8.00e-16	78.20
IUUC-Ani-009460	Aspergillus nidulans	38.40	3.00e-29	122.00
IUUC-Ame-011107	Astyanax mexicanus	69.31	7.00e-33	134.00
IUUC-Bgr-012056	Blumeria graminis	34.60	1.00e-21	97.10
IUUC-Bta-012377	Bos taurus	97.52	5.00e-152	530.00
IUUC-Bci-013933	Botrytis cinerea	35.16	1.00e-20	94.00
IUUC-Bdi-014355	Brachypodium distachyon	32.75	2.00e-41	162.00
IUUC-Bol-015272	Brassica oleracea	34.89	3.00e-51	195.00
IUUC-Bra-016970	Brassica rapa	34.84	3.00e-49	188.00
IUUC-Cel-018364	Caenorhabditis elegans	30.89	1.00e-25	110.00
IUUC-Cja-018946	Callithrix jacchus	95.87	3.00e-145	508.00
IUUC-Cfa-020577	Canis familiaris	99.45	2.00e-159	555.00
IUUC-Cpo-021850	Cavia porcellus	91.46	1.00e-157	548.00
IUUC-Csa-023183	Chlorocebus sabaeus	96.97	3.00e-153	534.00
IUUC-Csv-025823	Ciona savignyi	41.48	3.00e-38	151.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	32.02	2.00e-21	96.30
IUUC-Cne-027056	Cryptococcus neoformans	44.87	2.00e-12	67.00
IUUC-Cme-027260	Cyanidioschyzon merolae	26.08	3.00e-20	92.80
IUUC-Dno-030017	Dasypus novemcinctus	92.37	1.00e-130	459.00
IUUC-Dor-030358	Dipodomys ordii	83.52	2.00e-125	441.00
IUUC-Dme-032027	Drosophila melanogaster	41.12	1.00e-46	180.00
IUUC-Eca-033599	Equus caballus	94.40	3.00e-138	484.00
IUUC-Fca-036051	Felis catus	98.62	2.00e-157	548.00
IUUC-Fox-037960	Fusarium oxysporum	46.53	1.00e-15	77.40
IUUC-Fso-038107	Fusarium solani	48.51	9.00e-16	77.80
IUUC-Gmo-038528	Gadus morhua	56.91	6.00e-86	310.00
IUUC-Gga-040133	Gallus gallus	86.98	1.00e-71	263.00
IUUC-Gac-042239	Gasterosteus aculeatus	55.99	3.00e-89	322.00
IUUC-Gma-044245	Glycine max	36.50	2.00e-53	202.00
IUUC-Ggo-045084	Gorilla gorilla	97.25	4.00e-153	533.00
IUUC-Hsa-046614	Homo sapiens	97.25	6.00e-154	536.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	96.42	6.00e-173	599.00
IUUC-Lch-050563	Latimeria chalumnae	63.91	6.00e-100	357.00
IUUC-Lma-053328	Leptosphaeria maculans	50.00	3.00e-12	62.80
IUUC-Laf-054589	Loxodonta africana	96.97	6.00e-148	516.00
IUUC-Mcc-055860	Macaca mulatta	96.97	3.00e-153	534.00
IUUC-Meu-056459	Macropus eugenii	93.95	9.00e-99	353.00
IUUC-Mtr-058239	Medicago truncatula	33.50	7.00e-47	181.00
IUUC-Mmr-060819	Microcebus murinus	96.42	3.00e-166	577.00
IUUC-Mdo-062742	Monodelphis domestica	84.99	8.00e-136	476.00
IUUC-Mmu-063929	Mus musculus	93.94	3.00e-162	564.00
IUUC-Mac-064724	Musa acuminata	33.26	2.00e-44	173.00
IUUC-Mlu-067787	Myotis lucifugus	96.42	2.00e-154	538.00
IUUC-Nle-069846	Nomascus leucogenys	85.56	1.00e-132	466.00
IUUC-Oan-073572	Ornithorhynchus anatinus	80.17	2.00e-124	438.00
IUUC-Ocu-074968	Oryctolagus cuniculus	94.42	1.00e-103	370.00
IUUC-Obr-076909	Oryza brachyantha	34.27	6.00e-43	167.00
IUUC-Ogl-077067	Oryza glaberrima	34.52	4.00e-48	185.00
IUUC-Opu-083756	Oryza punctata	39.04	4.00e-32	132.00
IUUC-Oga-089075	Otolemur garnettii	96.14	1.00e-147	516.00
IUUC-Oar-090387	Ovis aries	96.97	7.00e-149	520.00
IUUC-Ptr-090912	Pan troglodytes	93.66	5.00e-143	500.00
IUUC-Pan-092140	Papio anubis	96.97	1.00e-152	532.00
IUUC-Psi-093347	Pelodiscus sinensis	86.46	5.00e-61	228.00
IUUC-Pno-095064	Phaeosphaeria nodorum	36.32	1.00e-17	83.60
IUUC-Pfo-096607	Poecilia formosa	64.61	8.00e-97	347.00
IUUC-Pab-097738	Pongo abelii	93.39	9.00e-147	512.00
IUUC-Pop-099642	Populus trichocarpa	34.47	3.00e-47	182.00
IUUC-Pca-100348	Procavia capensis	93.68	3.00e-144	504.00
IUUC-Ppe-101522	Prunus persica	35.34	3.00e-50	192.00
IUUC-Pva-102412	Pteropus vampyrus	98.62	1.00e-159	555.00
IUUC-Pgr-103618	Puccinia graminis	37.69	1.00e-25	110.00
IUUC-Rno-105569	Rattus norvegicus	93.94	7.00e-149	520.00
IUUC-Sha-106918	Sarcophilus harrisii	85.42	4.00e-123	434.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	38.31	7.00e-33	134.00
IUUC-Smo-109129	Selaginella moellendorffii	38.40	1.00e-31	130.00
IUUC-Sit-109813	Setaria italica	35.34	6.00e-45	174.00
IUUC-Stu-112027	Solanum tuberosum	35.52	2.00e-50	192.00
IUUC-Sbi-114459	Sorghum bicolor	32.21	8.00e-44	171.00
IUUC-Ssc-115460	Sus scrofa	98.07	5.00e-157	546.00
IUUC-Tsy-119385	Tarsius syrichta	80.15	4.00e-70	257.00
IUUC-Tni-120493	Tetraodon nigroviridis	59.89	3.00e-93	335.00
IUUC-Tca-121594	Theobroma cacao	36.13	9.00e-50	190.00
IUUC-Tre-121911	Trichoderma reesei	41.53	5.00e-26	111.00
IUUC-Tae-125230	Triticum aestivum	34.75	6.00e-29	121.00
IUUC-Tme-127092	Tuber melanosporum	37.02	2.00e-26	112.00
IUUC-Tbe-127603	Tupaia belangeri	85.40	5.00e-55	207.00
IUUC-Ttr-129232	Tursiops truncatus	87.60	6.00e-147	513.00
IUUC-Xma-133647	Xiphophorus maculatus	74.21	2.00e-71	262.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence