iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014384

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000884

Gene Name

LOC100823842; BRADI_5g20040

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G20040	BRADI5G20040.1	BRADI5G20040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-58	193.2	152	191
UBD/Beta-Prp	6.50e-116	387.2	415	670

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+ vt + f   +   ll sGsdDgt++vW+l + +++
   Q: 152  GHTGVVTTIMFhkdPKrLLLFSGSDDGTVRVWNLESKKCV 191
           8***********76555668**************999886 PP

UBD/Beta-Prp

   S: 18   fspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls..........tgkcvhtlkghedsvlsls 101
              +k+l++tgs+d+t+++wd+++ +++ + +gh +++ +v fs+++k ++v+gs+Drtikvw+ +          + k    + +h++++ sls
   Q: 415  A-SGKTLVVTGSKDNTVRLWDMEKRSCIGTGKGHLGAIGCVAFSKKSKnFFVSGSSDRTIKVWSWDdtlidadgevSLKAKAGVAAHDKDINSLS 508
           3.6899**************************************99888**************6666677776777777777788********** PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelv 196
           +sp++  + sGs+drt+ +w+l++   +  +l+gh++ +++v+++p +++++++s Drtv++W +  g++l+t++g ht+sv + sf s g+++v
   Q: 509  VSPNDGLVCSGSEDRTACIWKLPNLVSSV-VLKGHKRGIWSVEFSPVEQCVITSSGDRTVKIWHVTDGSCLKTFEG-HTSSVLKASFLSRGTQFV 601
           *****************************.*********************************************9.****************** PP
   S: 197  sgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn 264
           s++ dg vklw ++t+ec+ t+  h+  v+ +++ +++e l++g+ D  +++W d+++ d    + +++
   Q: 602  SCGSDGLVKLWTIKTSECIATYDKHDGKVWALAVGRKTEMLATGGTDSDLNLWhDCTTEDKQEDFRKKE 670
           **********************************************************99988887765 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MASSQGPKKN YRCDRSLQQF YTGGPFAVGS AAPGGEGDAE AFLACACGSE LRVVSAADAS 60
AIGEPIDGDS EAVTGLALSP DSRLLFAAGH SRLIRVWDLA SRTCIRSWKG HDGPVMAMAC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCTT CGCAGGGGCC TAAGAAGAAT TACCGCTGTG ACCGGTCGTT GCAGCAGTTC 60
TACACCGGCG GCCCGTTCGC CGTCGGGAGC GCTGCCCCTG GCGGCGAAGG CGACGCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0051301--P:cell division
GO:0009793--P:embryo development ending in seed dormancy
GO:0009880--P:embryonic pattern specification
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

bdi:100823842

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	85.26	0.00e+00	1441.00
IUUC-Aml-002376	Ailuropoda melanoleuca	38.15	2.00e-152	531.00
IUUC-Atr-002486	Amborella trichopoda	64.18	0.00e+00	1072.00
IUUC-Apl-003519	Anas platyrhynchos	37.06	1.00e-137	482.00
IUUC-Aca-004363	Anolis carolinensis	35.79	3.00e-76	278.00
IUUC-Aly-006152	Arabidopsis lyrata	64.10	0.00e+00	1046.00
IUUC-Ath-006966	Arabidopsis thaliana	64.30	0.00e+00	1055.00
IUUC-Ago-007746	Ashbya gossypii	30.06	5.00e-97	348.00
IUUC-Acl-008009	Aspergillus clavatus	29.80	1.00e-100	360.00
IUUC-Afl-008681	Aspergillus flavus	30.38	4.00e-95	342.00
IUUC-Afu-008798	Aspergillus fumigatus	29.18	8.00e-93	334.00
IUUC-Ani-009278	Aspergillus nidulans	29.67	3.00e-106	379.00
IUUC-Ang-009640	Aspergillus niger	31.14	2.00e-104	372.00
IUUC-Aor-010160	Aspergillus oryzae	30.22	2.00e-94	339.00
IUUC-Ate-010320	Aspergillus terreus	30.28	1.00e-103	370.00
IUUC-Ame-010930	Astyanax mexicanus	36.41	4.00e-38	150.00
IUUC-Bgr-012054	Blumeria graminis	30.02	2.00e-103	369.00
IUUC-Bta-012611	Bos taurus	38.67	7.00e-149	520.00
IUUC-Bci-013797	Botrytis cinerea	29.69	2.00e-103	370.00
IUUC-Bol-016483	Brassica oleracea	63.16	0.00e+00	1049.00
IUUC-Bra-017798	Brassica rapa	63.41	0.00e+00	1031.00
IUUC-Cel-018664	Caenorhabditis elegans	27.81	2.00e-92	333.00
IUUC-Cja-019092	Callithrix jacchus	38.36	2.00e-154	539.00
IUUC-Cfa-021040	Canis familiaris	37.30	6.00e-152	530.00
IUUC-Cpo-022529	Cavia porcellus	37.79	1.00e-145	509.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	54.01	4.00e-47	179.00
IUUC-Csa-024205	Chlorocebus sabaeus	38.21	1.00e-155	542.00
IUUC-Cin-025560	Ciona intestinalis	36.71	4.00e-147	514.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	31.10	3.00e-115	409.00
IUUC-Cne-027082	Cryptococcus neoformans	30.25	3.00e-111	395.00
IUUC-Cme-027159	Cyanidioschyzon merolae	23.23	5.00e-30	126.00
IUUC-Dre-028138	Danio rerio	42.14	1.00e-142	499.00
IUUC-Dno-029914	Dasypus novemcinctus	37.45	2.00e-102	366.00
IUUC-Dor-030685	Dipodomys ordii	41.12	1.00e-102	367.00
IUUC-Dse-031429	Dothistroma septosporum	30.42	9.00e-107	380.00
IUUC-Dme-031995	Drosophila melanogaster	29.08	2.00e-92	333.00
IUUC-Ete-033086	Echinops telfairi	41.94	2.00e-90	326.00
IUUC-Eca-034354	Equus caballus	38.57	2.00e-146	512.00
IUUC-Eeu-034832	Erinaceus europaeus	39.57	1.00e-87	316.00
IUUC-Fca-036136	Felis catus	34.31	2.00e-125	442.00
IUUC-Fal-036859	Ficedula albicollis	38.39	2.00e-155	541.00
IUUC-Fox-037863	Fusarium oxysporum	30.41	1.00e-100	360.00
IUUC-Fso-038389	Fusarium solani	29.54	8.00e-109	387.00
IUUC-Gmo-038711	Gadus morhua	35.08	3.00e-136	478.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.90	6.00e-103	367.00
IUUC-Gga-040263	Gallus gallus	38.80	8.00e-161	560.00
IUUC-Gac-041291	Gasterosteus aculeatus	38.14	7.00e-161	560.00
IUUC-Gma-044026	Glycine max	63.81	0.00e+00	1098.00
IUUC-Ggo-044693	Gorilla gorilla	38.07	2.00e-152	532.00
IUUC-Hsa-046048	Homo sapiens	38.19	2.00e-152	532.00
IUUC-Hvu-047608	Hordeum vulgare	91.78	0.00e+00	1583.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	38.67	2.00e-157	548.00
IUUC-Kpa-049209	Komagataella pastoris	30.43	5.00e-111	394.00
IUUC-Lch-050085	Latimeria chalumnae	36.43	1.00e-143	503.00
IUUC-Lpe-050945	Leersia perrieri	85.44	0.00e+00	1408.00
IUUC-Loc-052679	Lepisosteus oculatus	38.15	2.00e-169	588.00
IUUC-Laf-053685	Loxodonta africana	37.96	2.00e-143	502.00
IUUC-Mcc-055861	Macaca mulatta	38.08	2.00e-151	529.00
IUUC-Meu-056820	Macropus eugenii	35.10	2.00e-110	392.00
IUUC-Mor-057234	Magnaporthe oryzae	29.92	1.00e-96	347.00
IUUC-Mpo-057456	Magnaporthe poae	29.62	7.00e-82	297.00
IUUC-Mtr-058122	Medicago truncatula	63.48	0.00e+00	1074.00
IUUC-Mla-058980	Melampsora laricipopulina	29.56	1.00e-84	307.00
IUUC-Mga-060080	Meleagris gallopavo	37.15	1.00e-156	546.00
IUUC-Mvi-060338	Microbotryum violaceum	34.53	3.00e-138	484.00
IUUC-Mmr-060762	Microcebus murinus	38.32	8.00e-151	526.00
IUUC-Mdo-061975	Monodelphis domestica	39.24	2.00e-150	525.00
IUUC-Mmu-064038	Mus musculus	39.07	1.00e-151	529.00
IUUC-Mac-065189	Musa acuminata	67.39	0.00e+00	1173.00
IUUC-Mpu-066526	Mustela putorius furo	38.67	4.00e-147	514.00
IUUC-Mlu-067716	Myotis lucifugus	38.57	5.00e-164	570.00
IUUC-Nfi-068474	Neosartorya fischeri	29.35	3.00e-97	349.00
IUUC-Ncr-068826	Neurospora crassa	27.92	6.00e-99	354.00
IUUC-Nle-069832	Nomascus leucogenys	37.43	5.00e-155	540.00
IUUC-Opr-071183	Ochotona princeps	38.28	3.00e-146	511.00
IUUC-Ont-072371	Oreochromis niloticus	39.02	2.00e-163	569.00
IUUC-Oan-073491	Ornithorhynchus anatinus	37.01	2.00e-124	439.00
IUUC-Oba-075963	Oryza barthii	84.75	0.00e+00	1449.00
IUUC-Obr-076173	Oryza brachyantha	87.95	0.00e+00	1427.00
IUUC-Ogl-077692	Oryza glaberrima	84.64	0.00e+00	1446.00
IUUC-Ogu-078965	Oryza glumaepatula	84.75	0.00e+00	1449.00
IUUC-Oin-079708	Oryza indica	84.53	0.00e+00	1443.00
IUUC-Olo-080679	Oryza longistaminata	84.87	0.00e+00	1445.00
IUUC-Oni-082960	Oryza nivara	84.42	0.00e+00	1442.00
IUUC-Opu-083282	Oryza punctata	84.57	0.00e+00	1414.00
IUUC-Oru-085224	Oryza rufipogon	84.53	0.00e+00	1445.00
IUUC-Osa-085320	Oryza sativa	84.53	0.00e+00	1445.00
IUUC-Ola-086370	Oryzias latipes	31.99	4.00e-76	278.00
IUUC-Olu-087814	Ostreococcus lucimarinus	34.88	4.00e-123	435.00
IUUC-Oga-088458	Otolemur garnettii	38.17	3.00e-159	554.00
IUUC-Oar-090032	Ovis aries	37.25	2.00e-111	395.00
IUUC-Ptr-090749	Pan troglodytes	37.94	2.00e-152	532.00
IUUC-Pan-091691	Papio anubis	36.73	4.00e-141	494.00
IUUC-Psi-093200	Pelodiscus sinensis	37.50	4.00e-156	544.00
IUUC-Pma-094165	Petromyzon marinus	35.78	3.00e-106	379.00
IUUC-Pno-095048	Phaeosphaeria nodorum	31.62	1.00e-90	327.00
IUUC-Ppa-095336	Physcomitrella patens	53.17	0.00e+00	855.00
IUUC-Pfo-096132	Poecilia formosa	39.57	2.00e-159	555.00
IUUC-Pab-097855	Pongo abelii	37.86	3.00e-155	541.00
IUUC-Pop-099434	Populus trichocarpa	62.39	0.00e+00	1041.00
IUUC-Pca-100232	Procavia capensis	36.75	2.00e-55	209.00
IUUC-Ppe-101665	Prunus persica	63.76	0.00e+00	1084.00
IUUC-Pva-102178	Pteropus vampyrus	38.43	5.00e-155	540.00
IUUC-Pgr-103288	Puccinia graminis	29.01	5.00e-90	325.00
IUUC-Ptt-103808	Puccinia triticina	30.38	3.00e-82	298.00
IUUC-Pte-104205	Pyrenophora teres	32.20	1.00e-107	383.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	30.97	2.00e-100	359.00
IUUC-Rno-105617	Rattus norvegicus	39.53	2.00e-154	539.00
IUUC-Sce-106281	Saccharomyces cerevisiae	29.81	3.00e-103	369.00
IUUC-Sha-107378	Sarcophilus harrisii	39.03	5.00e-151	527.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.19	7.00e-120	424.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.09	4.00e-118	418.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	30.01	2.00e-110	393.00
IUUC-Smo-109257	Selaginella moellendorffii	53.99	0.00e+00	859.00
IUUC-Sit-110258	Setaria italica	85.46	0.00e+00	1456.00
IUUC-Sly-111521	Solanum lycopersicum	63.47	0.00e+00	1042.00
IUUC-Stu-112718	Solanum tuberosum	69.34	7.00e-52	194.00
IUUC-Sar-113586	Sorex araneus	41.61	3.00e-25	109.00
IUUC-Sbi-114768	Sorghum bicolor	85.46	0.00e+00	1460.00
IUUC-Sre-115159	Sporisorium reilianum	32.45	8.00e-89	321.00
IUUC-Ssc-116342	Sus scrofa	30.68	5.00e-72	265.00
IUUC-Tgu-117320	Taeniopygia guttata	37.52	1.00e-143	503.00
IUUC-Tru-118024	Takifugu rubripes	38.20	7.00e-159	553.00
IUUC-Tni-119971	Tetraodon nigroviridis	38.56	4.00e-160	558.00
IUUC-Tca-121248	Theobroma cacao	66.03	0.00e+00	1060.00
IUUC-Tre-122079	Trichoderma reesei	30.02	4.00e-108	385.00
IUUC-Tvi-122554	Trichoderma virens	29.94	9.00e-109	387.00
IUUC-Tae-125845	Triticum aestivum	91.58	0.00e+00	1584.00
IUUC-Tur-126436	Triticum urartu	83.64	0.00e+00	1253.00
IUUC-Tme-126942	Tuber melanosporum	33.30	1.00e-113	403.00
IUUC-Ttr-128964	Tursiops truncatus	37.19	6.00e-149	520.00
IUUC-Uma-129473	Ustilago maydis	30.97	4.00e-95	342.00
IUUC-Vda-129749	Verticillium dahliae	30.25	1.00e-102	366.00
IUUC-Vvi-131511	Vitis vinifera	66.59	0.00e+00	1077.00
IUUC-Xtr-132816	Xenopus tropicalis	34.24	2.00e-130	459.00
IUUC-Xma-133672	Xiphophorus maculatus	39.02	5.00e-163	567.00
IUUC-Yli-134602	Yarrowia lipolytica	36.36	5.00e-137	481.00
IUUC-Zma-135559	Zea mays	81.74	0.00e+00	1407.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence