iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-024218

Ensembl Protein ID

ENSCSAP00000001017.1

UniProt Accession

A0A0D9QXC8; A0A0D9QXC8_CHLSB

Genbank Protein ID

ENSCSAP00000001017

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01134402

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000004701.1	ENSCSAT00000002719.1	ENSCSAP00000001017.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-39	130.9	100	137
UBD/Beta-Prp	2.20e-57	194.5	224	393

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gH+  v+ ++f  +dt l+sGs+D+t+k+WD  +g ++
   Q: 100  GHEHAVSTCHFcvDDTKLLSGSHDCTVKLWDAVDGSVV 137
           8***********777****************9888766 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls......tgk 85
           ++k+hh+  it+ +f pd++ +a+ s d++ik+wdvt++ +l ++ + h+++++ ++f  +g +l t+s D+++k+w++        g 
   Q: 224  VIKDHHTRSITSCCFDPDSQRVASVSLDRCIKIWDVTSQATLLTItKAHSNAISNCCFTFSGHFLCTSSWDKNLKIWNVHtgefrnRGA 312
           799**************************************99999*******************************999888888999 PP
   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlk 167
           cv  ++ghe sv s++f +++++l+sG+ drt+ +wd+ +g+     l+gh+++v+ v+++ +++ + s+s+Drt+rlW+++
   Q: 313  CVTLMQGHEGSVSSCHFARDSSFLISGGFDRTVAIWDVAEGYRKL-SLKGHNDWVMDVAISNNKKWILSASKDRTMRLWNIE 393
           *********************************************.**********************************94 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MASPRRCSPT APDRECKLPP PSAPAGEYPP GKLSWGTLAR ALGRFTLSIP HTRLLATLDP 60
LALDREPPPQ LSPEKQQMPE KLIWGDQEPL SKIPFKILSG HEHAVSTCHF CVDDTKLLSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCGC CGCGGCGGTG CTCCCCGACA GCCCCGGACA GGGAATGCAA GTTGCCGCCA 60
CCCTCGGCCC CTGCCGGCGA GTATCCCCCT GGCAAGCTGT CCTGGGGAAC CCTGGCGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018391--PQQ_beta_propeller_repeat
IPR002372--PQQ_repeat
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF01011--PQQ
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00564--PQQ
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	81.01	8.00e-158	549.00
IUUC-Apl-003571	Anas platyrhynchos	55.99	3.00e-121	428.00
IUUC-Aca-005232	Anolis carolinensis	49.41	1.00e-78	285.00
IUUC-Ame-011833	Astyanax mexicanus	49.48	5.00e-54	203.00
IUUC-Bta-013562	Bos taurus	73.47	0.00e+00	641.00
IUUC-Cja-019202	Callithrix jacchus	88.89	0.00e+00	854.00
IUUC-Cfa-021095	Canis familiaris	70.58	0.00e+00	648.00
IUUC-Cpo-022170	Cavia porcellus	74.89	0.00e+00	659.00
IUUC-Cho-024561	Choloepus hoffmanni	78.40	6.00e-134	469.00
IUUC-Dno-029722	Dasypus novemcinctus	76.58	3.00e-164	570.00
IUUC-Dor-030464	Dipodomys ordii	72.36	2.00e-141	494.00
IUUC-Ete-032931	Echinops telfairi	65.48	9.00e-119	419.00
IUUC-Eca-034428	Equus caballus	81.18	2.00e-178	617.00
IUUC-Eeu-034568	Erinaceus europaeus	58.79	6.00e-116	410.00
IUUC-Fca-035707	Felis catus	70.35	0.00e+00	646.00
IUUC-Gmo-039646	Gadus morhua	46.30	2.00e-75	275.00
IUUC-Gga-040710	Gallus gallus	56.00	1.00e-115	409.00
IUUC-Ggo-044611	Gorilla gorilla	62.97	7.00e-150	523.00
IUUC-Hsa-046138	Homo sapiens	94.28	0.00e+00	900.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	68.03	6.00e-180	623.00
IUUC-Lch-050329	Latimeria chalumnae	50.43	9.00e-107	380.00
IUUC-Loc-052876	Lepisosteus oculatus	40.72	2.00e-33	135.00
IUUC-Laf-053777	Loxodonta africana	75.06	0.00e+00	681.00
IUUC-Mcc-055771	Macaca mulatta	97.24	0.00e+00	901.00
IUUC-Meu-056584	Macropus eugenii	47.99	1.00e-86	312.00
IUUC-Mga-059818	Meleagris gallopavo	54.92	2.00e-123	435.00
IUUC-Mmr-060639	Microcebus murinus	76.50	4.00e-166	577.00
IUUC-Mdo-062321	Monodelphis domestica	55.31	3.00e-140	491.00
IUUC-Mpu-066849	Mustela putorius furo	74.47	0.00e+00	642.00
IUUC-Mlu-067238	Myotis lucifugus	68.30	5.00e-174	603.00
IUUC-Ont-071230	Oreochromis niloticus	44.57	8.00e-85	306.00
IUUC-Oan-072698	Ornithorhynchus anatinus	61.04	3.00e-144	504.00
IUUC-Ocu-074219	Oryctolagus cuniculus	79.09	2.00e-178	618.00
IUUC-Oga-087913	Otolemur garnettii	72.96	0.00e+00	655.00
IUUC-Oar-089977	Ovis aries	78.24	0.00e+00	633.00
IUUC-Ptr-090876	Pan troglodytes	96.22	0.00e+00	894.00
IUUC-Pan-091936	Papio anubis	95.00	1.00e-142	498.00
IUUC-Psi-093015	Pelodiscus sinensis	52.80	9.00e-77	279.00
IUUC-Pma-094552	Petromyzon marinus	33.33	5.00e-31	127.00
IUUC-Pfo-096240	Poecilia formosa	42.72	3.00e-77	283.00
IUUC-Pab-097983	Pongo abelii	84.04	0.00e+00	761.00
IUUC-Pca-100752	Procavia capensis	61.06	2.00e-146	511.00
IUUC-Pva-102199	Pteropus vampyrus	66.67	3.00e-177	614.00
IUUC-Rno-106062	Rattus norvegicus	69.40	5.00e-175	607.00
IUUC-Sar-113167	Sorex araneus	51.08	7.00e-35	140.00
IUUC-Ssc-116089	Sus scrofa	74.70	0.00e+00	635.00
IUUC-Tbe-127860	Tupaia belangeri	64.95	7.00e-170	590.00
IUUC-Ttr-129152	Tursiops truncatus	74.09	4.00e-178	617.00
IUUC-Vpa-130745	Vicugna pacos	67.16	8.00e-180	623.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence