iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048283

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01062947

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000003752.2	ENSSTOT00000003756.2	ENSSTOP00000003364.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-31	106.2	320	351
UBD/Beta-Prp	3.70e-59	200.3	226	431

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ v++++f  d  +l+sG+ D+++ +WD+
   Q: 320  GHEGCVSSCCFaRDnSFLISGGFDKSVAIWDV 351
           8***********66699**************7 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls......tgkc 86
           +k+hh   i + +f pd++ la+ s d++ik+wdvt++ +l ++ + he++++ ++f  +g +l ++s D+ +k+w++        g c
   Q: 226  IKDHHRRSIMACCFDPDSQKLASVSLDRSIKIWDVTSKATLLTItKAHENAISNCCFTFSGHFLCSSSWDKKLKIWNVHtgefrnRGAC 314
           799*************************************99999*******************************999888888999* PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......... 166
           v  ++ghe  v s+ f +++++l+sG+ d+ + +wd+ +g+     l+gh+++v+ v+++ +++ + s+s+ +t+rlW++         
   Q: 315  VTLMQGHEGCVSSCCFARDNSFLISGGFDKSVAIWDVGEGYRKL-SLKGHEDWVMDVAISNNKKWILSASKEKTMRLWNIekidqvplv 402
           ********************************************.***********************************999999999 PP
   S: 167  .....ktgkllrtltgghtdsvyslsfdsn 191
                ++g+l+++ +g  +++   l+ ds+
   Q: 403  ienqkAMGTLVKQCEG-CDRPFSTLESDSS 431
           9999999999998888.7777777777663 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MASRRPGSPK PISKDWKRSV PPGMYWPLKM PGATYVARAK RRFKLSIPDI YHSRLLASLD 60
PLALDKEAPQ KPVKQEIMSE ERFWGDHQPL SKVRTTPGVR GSDLALMGCD SIISPPKLLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCCA GGAGGCCAGG TTCCCCAAAA CCCATAAGCA AGGACTGGAA GAGGTCGGTT 60
CCTCCGGGAA TGTACTGGCC TCTCAAGATG CCTGGGGCTA CTTACGTGGC GAGAGCCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	76.83	3.00e-149	520.00
IUUC-Apl-003571	Anas platyrhynchos	48.47	7.00e-108	383.00
IUUC-Aca-005232	Anolis carolinensis	46.06	1.00e-73	268.00
IUUC-Ame-011833	Astyanax mexicanus	49.74	1.00e-53	202.00
IUUC-Bta-013562	Bos taurus	67.59	4.00e-159	554.00
IUUC-Cja-019202	Callithrix jacchus	65.32	8.00e-166	576.00
IUUC-Cfa-021095	Canis familiaris	62.98	1.00e-153	535.00
IUUC-Cpo-022170	Cavia porcellus	64.71	1.00e-161	561.00
IUUC-Csa-024218	Chlorocebus sabaeus	70.79	3.00e-175	607.00
IUUC-Cho-024561	Choloepus hoffmanni	74.82	9.00e-125	439.00
IUUC-Dno-029722	Dasypus novemcinctus	68.63	1.00e-141	495.00
IUUC-Dor-030464	Dipodomys ordii	71.37	1.00e-114	405.00
IUUC-Ete-032931	Echinops telfairi	60.25	1.00e-108	385.00
IUUC-Eca-034428	Equus caballus	72.57	7.00e-156	542.00
IUUC-Eeu-034568	Erinaceus europaeus	58.43	8.00e-112	396.00
IUUC-Fca-035707	Felis catus	60.96	1.00e-153	535.00
IUUC-Gmo-039646	Gadus morhua	40.20	6.00e-63	233.00
IUUC-Gga-040710	Gallus gallus	49.85	6.00e-105	373.00
IUUC-Ggo-044611	Gorilla gorilla	47.00	2.00e-97	348.00
IUUC-Hsa-046138	Homo sapiens	67.34	5.00e-171	593.00
IUUC-Lch-050329	Latimeria chalumnae	47.97	1.00e-99	356.00
IUUC-Laf-053777	Loxodonta africana	67.49	3.00e-170	590.00
IUUC-Mcc-055771	Macaca mulatta	70.09	1.00e-174	605.00
IUUC-Meu-056584	Macropus eugenii	46.32	9.00e-86	309.00
IUUC-Mga-059818	Meleagris gallopavo	47.78	2.00e-110	391.00
IUUC-Mmr-060639	Microcebus murinus	69.83	1.00e-150	525.00
IUUC-Mdo-062321	Monodelphis domestica	50.64	1.00e-120	426.00
IUUC-Mpu-066849	Mustela putorius furo	65.48	2.00e-159	555.00
IUUC-Mlu-067238	Myotis lucifugus	61.54	3.00e-149	521.00
IUUC-Ont-071230	Oreochromis niloticus	40.51	1.00e-67	249.00
IUUC-Oan-072698	Ornithorhynchus anatinus	54.17	9.00e-126	442.00
IUUC-Ocu-074219	Oryctolagus cuniculus	67.65	7.00e-152	529.00
IUUC-Oga-087913	Otolemur garnettii	65.30	5.00e-158	550.00
IUUC-Oar-089977	Ovis aries	68.75	2.00e-157	548.00
IUUC-Ptr-090876	Pan troglodytes	68.43	3.00e-172	597.00
IUUC-Pan-091936	Papio anubis	78.23	2.00e-114	404.00
IUUC-Psi-093015	Pelodiscus sinensis	43.80	3.00e-62	231.00
IUUC-Pma-094552	Petromyzon marinus	26.32	1.00e-22	99.00
IUUC-Pfo-096240	Poecilia formosa	39.56	3.00e-72	267.00
IUUC-Pab-097983	Pongo abelii	61.78	4.00e-143	500.00
IUUC-Pca-100752	Procavia capensis	57.24	3.00e-132	464.00
IUUC-Pva-102199	Pteropus vampyrus	57.21	8.00e-146	509.00
IUUC-Rno-106062	Rattus norvegicus	63.46	2.00e-156	545.00
IUUC-Sar-113167	Sorex araneus	48.20	2.00e-34	138.00
IUUC-Ssc-116089	Sus scrofa	65.62	2.00e-155	541.00
IUUC-Tbe-127860	Tupaia belangeri	56.13	1.00e-141	496.00
IUUC-Ttr-129152	Tursiops truncatus	66.25	3.00e-150	524.00
IUUC-Vpa-130745	Vicugna pacos	59.86	2.00e-148	518.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence