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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-006907
Ensembl Protein ID AT5G04920.1
UniProt Accession Q9FF81; Q0WQI2; VPS36_ARATH
Genbank Protein ID BAB11514.1; AED90804.1; AAL59912.1; AAM20220.1; BAF00617.1
Protein Name Vacuolar protein sorting-associated protein 36; ESCRT-II complex subunit VPS36
Genbank Nucleotide ID AB005245; CP002688; AY072089; AY096570; AK228715
Gene Name VPS36; At5g04920; MUG13.23
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G04920 AT5G04920.1 AT5G04920.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndexPINAHINTMentha
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
UBD/PH/GLUE GLUE 17090720
Reviewed
Classification
Family Identity E-value Score Source Orthology
UBD/PH/GLUE 34.12 1.00e-41 167.00 IUUC-Dme-031977
UBD/PH/GLUE 37.90 6.00e-56 216.00 IUUC-Hsa-046228
UBD/PH/GLUE 38.50 6.00e-58 222.00 IUUC-Mmu-063115
UBD/PH/GLUE 24.05 2.00e-04 42.40 IUUC-Sce-106148
UBD/ZnF/NZF 24.05 2.00e-04 42.40 IUUC-Sce-106148
UBD/ZnF/NZF 26.00 1.00e-16 82.40 IUUC-Spo-108225
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Component of the ESCRT-II complex (endosomal sorting complex required for transport II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. The ESCRT-II complex is probably involved in the recruitment of the ESCRT-III complex (By similarity).
 Component of the ESCRT-II complex (endosomal sorting complex required for transport II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. The ESCRT-II complex is probably involved in the recruitment of the ESCRT-III complex (By similarity).
Protein Sequence
(Fasta)
MASGSSSIAI GGLFENAEVT TSGRPVLRRN EVECFLLSSI DIDSEDDPPR FTALRSGNLI 60
LTTHRLIWIP SQSNESVPSS IPLSAVTHIY SHKKSIKSMF HSPRIRFQAD PGSIVVTIVF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006907|UBD,GLUE;UBD,NZF|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATAAAATCCA TGGGATTGGA TTTAGTAAAA CGACACGTCT ACAAGTTTTA GGGATTTCGT 60
ATTTTGCTTT CATTTCTTCT TCTTCTTCTT CATACGAGAG CCGAAAACGA ATAAGAAGAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006907|UBD,GLUE;UBD,NZF|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0967--Endosome
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
Interpro

IPR007286--EAP30
IPR021648--GLUE_dom
IPR011993--PH_dom-like
IPR011991--WHTH_DNA-bd_dom
PROSITE

PS51495--GLUE
Pfam

PF04157--EAP30
PF11605--Vps36_ESCRT-II
Gene Ontology

GO:0005769--C:early endosome
GO:0000814--C:ESCRT II complex
GO:0005770--C:late endosome
GO:0031902--C:late endosome membrane
GO:0005886--C:plasma membrane
GO:0032266--F:phosphatidylinositol-3-phosphate binding
GO:0043130--F:ubiquitin binding
GO:0071985--P:multivesicular body sorting pathway
GO:0043328--P:protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0090351--P:seedling development
GO:0007033--P:vacuole organization
KEGG ath:AT5G04920
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000963 Aegilops tauschii 71.58 8.00e-78 282.00
IUUC-Aml-002313 Ailuropoda melanoleuca 36.92 5.00e-54 204.00
IUUC-Atr-003096 Amborella trichopoda 56.09 2.00e-67 248.00
IUUC-Apl-003218 Anas platyrhynchos 37.84 4.00e-53 201.00
IUUC-Aca-004580 Anolis carolinensis 37.50 1.00e-52 199.00
IUUC-Aly-006398 Arabidopsis lyrata 95.87 0.00e+00 827.00
IUUC-Ago-007840 Ashbya gossypii 24.62 6.00e-04 38.50
IUUC-Acl-008117 Aspergillus clavatus 36.88 2.00e-34 140.00
IUUC-Afl-008595 Aspergillus flavus 32.16 3.00e-30 126.00
IUUC-Afu-008918 Aspergillus fumigatus 32.68 5.00e-31 128.00
IUUC-Ani-009206 Aspergillus nidulans 32.73 2.00e-32 132.00
IUUC-Ang-009784 Aspergillus niger 36.43 2.00e-34 139.00
IUUC-Aor-010126 Aspergillus oryzae 32.16 2.00e-30 126.00
IUUC-Ate-010303 Aspergillus terreus 33.33 3.00e-32 132.00
IUUC-Ame-011190 Astyanax mexicanus 38.11 8.00e-54 203.00
IUUC-Bgr-011979 Blumeria graminis 31.64 4.00e-29 122.00
IUUC-Bta-012661 Bos taurus 38.27 5.00e-54 204.00
IUUC-Bci-013982 Botrytis cinerea 35.71 1.00e-31 130.00
IUUC-Bdi-014753 Brachypodium distachyon 56.40 4.00e-124 437.00
IUUC-Bol-015465 Brassica oleracea 87.56 0.00e+00 707.00
IUUC-Bra-016794 Brassica rapa 87.41 0.00e+00 704.00
IUUC-Cel-018514 Caenorhabditis elegans 30.13 4.00e-40 157.00
IUUC-Cja-019285 Callithrix jacchus 37.84 2.00e-51 195.00
IUUC-Cfa-020746 Canis familiaris 36.92 1.00e-52 199.00
IUUC-Cpo-022005 Cavia porcellus 38.59 1.00e-54 205.00
IUUC-Cre-022686 Chlamydomonas reinhardtii 44.96 1.00e-46 180.00
IUUC-Csa-023520 Chlorocebus sabaeus 36.67 3.00e-53 201.00
IUUC-Cho-024957 Choloepus hoffmanni 37.50 5.00e-52 197.00
IUUC-Csv-025942 Ciona savignyi 34.75 1.00e-48 186.00
IUUC-Cgl-026558 Colletotrichum gloeosporioides 34.62 2.00e-28 120.00
IUUC-Cne-026915 Cryptococcus neoformans 26.61 2.00e-07 49.70
IUUC-Cme-027099 Cyanidioschyzon merolae 28.23 1.00e-12 67.00
IUUC-Dre-027753 Danio rerio 37.80 6.00e-54 203.00
IUUC-Dno-029922 Dasypus novemcinctus 38.04 4.00e-53 201.00
IUUC-Dor-030643 Dipodomys ordii 34.47 9.00e-44 170.00
IUUC-Dse-031368 Dothistroma septosporum 32.06 6.00e-25 108.00
IUUC-Dme-031977 Drosophila melanogaster 33.16 1.00e-41 163.00
IUUC-Ete-033135 Echinops telfairi 40.09 2.00e-31 128.00
IUUC-Eca-033937 Equus caballus 36.56 2.00e-50 192.00
IUUC-Eeu-034483 Erinaceus europaeus 36.67 2.00e-57 215.00
IUUC-Fca-035496 Felis catus 38.17 3.00e-54 204.00
IUUC-Fal-036743 Ficedula albicollis 38.44 2.00e-54 205.00
IUUC-Fox-037685 Fusarium oxysporum 37.44 7.00e-23 101.00
IUUC-Fso-038421 Fusarium solani 36.92 5.00e-23 102.00
IUUC-Gmo-039456 Gadus morhua 34.91 4.00e-47 181.00
IUUC-Ggr-039763 Gaeumannomyces graminis 34.06 3.00e-30 125.00
IUUC-Gga-040556 Gallus gallus 37.77 4.00e-51 195.00
IUUC-Gac-041481 Gasterosteus aculeatus 36.73 6.00e-42 164.00
IUUC-Gma-044185 Glycine max 63.34 5.00e-142 496.00
IUUC-Ggo-044849 Gorilla gorilla 36.92 2.00e-53 202.00
IUUC-Hsa-046228 Homo sapiens 36.92 2.00e-53 202.00
IUUC-Hvu-047858 Hordeum vulgare 69.91 3.00e-37 148.00
IUUC-Itr-048692 Ictidomys tridecemlineatus 39.02 1.00e-54 206.00
IUUC-Kpa-049240 Komagataella pastoris 21.49 2.00e-10 60.10
IUUC-Lch-050293 Latimeria chalumnae 44.53 6.00e-48 183.00
IUUC-Lpe-051363 Leersia perrieri 55.53 8.00e-124 436.00
IUUC-Loc-052866 Lepisosteus oculatus 38.11 3.00e-51 195.00
IUUC-Lma-053139 Leptosphaeria maculans 33.45 1.00e-28 120.00
IUUC-Laf-053881 Loxodonta africana 36.27 1.00e-50 192.00
IUUC-Mcc-055158 Macaca mulatta 37.63 4.00e-53 201.00
IUUC-Meu-056126 Macropus eugenii 30.33 7.00e-29 120.00
IUUC-Mor-057092 Magnaporthe oryzae 33.33 1.00e-27 117.00
IUUC-Mpo-057629 Magnaporthe poae 35.14 9.00e-30 123.00
IUUC-Mtr-058039 Medicago truncatula 64.24 4.00e-140 490.00
IUUC-Mla-058913 Melampsora laricipopulina 25.97 2.00e-14 73.60
IUUC-Mga-059956 Meleagris gallopavo 37.77 3.00e-52 198.00
IUUC-Mvi-060570 Microbotryum violaceum 25.00 8.00e-08 51.60
IUUC-Mmr-061769 Microcebus murinus 37.90 3.00e-54 204.00
IUUC-Mdo-062751 Monodelphis domestica 38.36 2.00e-52 199.00
IUUC-Mmu-063115 Mus musculus 38.50 4.00e-55 207.00
IUUC-Mac-064979 Musa acuminata 59.77 1.00e-133 469.00
IUUC-Mpu-066904 Mustela putorius furo 34.12 4.00e-29 120.00
IUUC-Mlu-067474 Myotis lucifugus 38.48 2.00e-52 198.00
IUUC-Nfi-068588 Neosartorya fischeri 33.07 7.00e-31 128.00
IUUC-Ncr-068855 Neurospora crassa 34.70 3.00e-24 105.00
IUUC-Nle-069660 Nomascus leucogenys 37.90 3.00e-53 201.00
IUUC-Opr-070695 Ochotona princeps 37.59 2.00e-54 205.00
IUUC-Ont-071837 Oreochromis niloticus 37.06 5.00e-47 181.00
IUUC-Oan-072903 Ornithorhynchus anatinus 38.32 2.00e-55 208.00
IUUC-Ocu-074833 Oryctolagus cuniculus 37.23 2.00e-54 205.00
IUUC-Oba-075899 Oryza barthii 69.70 2.00e-110 390.00
IUUC-Obr-076125 Oryza brachyantha 55.38 3.00e-131 461.00
IUUC-Ogl-077538 Oryza glaberrima 66.46 1.00e-64 239.00
IUUC-Ogu-078272 Oryza glumaepatula 55.89 1.00e-123 436.00
IUUC-Oin-079158 Oryza indica 55.43 9.00e-124 436.00
IUUC-Olo-080496 Oryza longistaminata 70.68 1.00e-102 365.00
IUUC-Ome-081440 Oryza meridionalis 69.14 1.00e-100 358.00
IUUC-Oni-083069 Oryza nivara 55.56 7.00e-124 436.00
IUUC-Opu-083838 Oryza punctata 67.92 4.00e-106 376.00
IUUC-Oru-084377 Oryza rufipogon 55.76 8.00e-124 436.00
IUUC-Osa-085976 Oryza sativa 55.76 8.00e-124 436.00
IUUC-Ola-086431 Oryzias latipes 37.60 1.00e-45 176.00
IUUC-Olu-087789 Ostreococcus lucimarinus 42.19 5.00e-51 193.00
IUUC-Oga-089152 Otolemur garnettii 37.04 3.00e-54 204.00
IUUC-Oar-089198 Ovis aries 38.27 1.00e-54 206.00
IUUC-Ptr-091123 Pan troglodytes 36.92 2.00e-53 202.00
IUUC-Pan-092866 Papio anubis 35.85 2.00e-50 192.00
IUUC-Psi-093384 Pelodiscus sinensis 38.04 3.00e-53 201.00
IUUC-Pno-094773 Phaeosphaeria nodorum 30.15 5.00e-19 88.60
IUUC-Ppa-095753 Physcomitrella patens 50.11 4.00e-110 390.00
IUUC-Pfo-096028 Poecilia formosa 37.30 7.00e-45 173.00
IUUC-Pop-098915 Populus trichocarpa 68.08 5.00e-159 553.00
IUUC-Pca-100422 Procavia capensis 38.93 1.00e-54 206.00
IUUC-Ppe-101564 Prunus persica 66.90 5.00e-147 513.00
IUUC-Pva-103019 Pteropus vampyrus 35.96 5.00e-46 177.00
IUUC-Pgr-103670 Puccinia graminis 27.20 1.00e-12 67.40
IUUC-Ptt-103958 Puccinia triticina 27.64 8.00e-12 64.30
IUUC-Pte-104343 Pyrenophora teres 31.29 6.00e-32 131.00
IUUC-Pyt-104554 Pyrenophora triticirepentis 31.06 6.00e-32 131.00
IUUC-Rno-105775 Rattus norvegicus 38.92 1.00e-54 206.00
IUUC-Sce-106148 Saccharomyces cerevisiae 24.05 3.00e-05 42.70
IUUC-Sha-106468 Sarcophilus harrisii 39.46 1.00e-55 209.00
IUUC-Sja-107850 Schizosaccharomyces japonicus 26.10 2.00e-14 72.80
IUUC-Spo-108225 Schizosaccharomyces pombe 25.79 4.00e-17 82.00
IUUC-Ssl-108412 Sclerotinia sclerotiorum 33.54 4.00e-33 135.00
IUUC-Smo-108898 Selaginella moellendorffii 51.49 7.00e-103 366.00
IUUC-Sit-110126 Setaria italica 54.85 1.00e-124 439.00
IUUC-Sly-110884 Solanum lycopersicum 63.59 5.00e-154 536.00
IUUC-Stu-112573 Solanum tuberosum 63.99 6.00e-153 533.00
IUUC-Sar-113114 Sorex araneus 34.62 3.00e-10 58.50
IUUC-Sbi-114331 Sorghum bicolor 45.66 1.00e-92 332.00
IUUC-Sre-115135 Sporisorium reilianum 27.16 7.00e-09 55.50
IUUC-Ssc-116158 Sus scrofa 37.16 1.00e-54 206.00
IUUC-Tgu-116962 Taeniopygia guttata 38.17 4.00e-54 204.00
IUUC-Tru-117567 Takifugu rubripes 37.03 5.00e-45 174.00
IUUC-Tsy-119357 Tarsius syrichta 34.59 6.00e-31 127.00
IUUC-Tni-120047 Tetraodon nigroviridis 36.49 2.00e-44 172.00
IUUC-Tca-121097 Theobroma cacao 65.50 3.00e-152 530.00
IUUC-Tre-122075 Trichoderma reesei 37.18 2.00e-29 123.00
IUUC-Tvi-122623 Trichoderma virens 33.21 2.00e-31 130.00
IUUC-Tae-123728 Triticum aestivum 69.74 5.00e-110 390.00
IUUC-Tur-125988 Triticum urartu 63.48 1.00e-78 285.00
IUUC-Tme-126936 Tuber melanosporum 36.96 8.00e-38 151.00
IUUC-Tbe-127481 Tupaia belangeri 29.32 2.00e-31 129.00
IUUC-Ttr-128160 Tursiops truncatus 37.16 1.00e-55 209.00
IUUC-Uma-129428 Ustilago maydis 25.52 2.00e-13 70.10
IUUC-Vda-129877 Verticillium dahliae 31.29 6.00e-25 108.00
IUUC-Vpa-130358 Vicugna pacos 38.86 3.00e-53 201.00
IUUC-Vvi-131406 Vitis vinifera 63.70 2.00e-155 541.00
IUUC-Xtr-132548 Xenopus tropicalis 37.83 4.00e-52 197.00
IUUC-Xma-133352 Xiphophorus maculatus 37.30 3.00e-45 175.00
IUUC-Yli-134466 Yarrowia lipolytica 31.25 6.00e-26 111.00
IUUC-Zma-135081 Zea mays 54.97 6.00e-117 413.00
Created Date 25-Jun-2017

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