iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Fca-035732

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AANG02148718

Gene Name

RFWD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFCAG00000026835.1	ENSFCAT00000028055.1	ENSFCAP00000019525.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-07	31.8	476	514

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllk 37
           H+  +++laf   + +ll+s+s D tik+ +l t+++++
   Q: 476  HSKQIRGLAFssqPKGLLLSASLDSTIKLTSLETNTVVQ 514
           9999******975559************98888877766 PP

Organism

Felis catus

Protein Sequence
(Fasta)

MAHEEMEYSL EMELEHHAAE QPAPAEVAGS QEGPSPLQPL PAEVAGSHGG PPPLQPAPQV 60
SADPTEEVER LGEDGVEDVH PGASEEHGQG PGVNRPVQVS SLESMNSFLS GLQRLHGMLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGACCAACGG AAGAAGAAGA GAGGGTATTG GCTGCCGTCT AGGAGTGCTG TCCAATAGGA 60
GCAGGCTGCG CCCGCAAGTC GGGCGGGCAG CTTGAGCTGC TCAGGAAGTA GCTGCTGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0035861--C:site of double-strand break
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0031571--P:mitotic G1 DNA damage checkpoint
GO:2000001--P:regulation of DNA damage checkpoint
GO:0010212--P:response to ionizing radiation

KEGG

fca:101089313

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000929	Aegilops tauschii	25.25	1.00e-19	90.90
IUUC-Aml-001188	Ailuropoda melanoleuca	82.09	0.00e+00	1199.00
IUUC-Atr-003034	Amborella trichopoda	26.09	3.00e-18	85.90
IUUC-Apl-003182	Anas platyrhynchos	69.98	0.00e+00	726.00
IUUC-Aca-004619	Anolis carolinensis	62.11	0.00e+00	763.00
IUUC-Aly-006391	Arabidopsis lyrata	30.91	1.00e-33	137.00
IUUC-Ath-007300	Arabidopsis thaliana	26.78	2.00e-32	134.00
IUUC-Ame-010890	Astyanax mexicanus	59.63	0.00e+00	626.00
IUUC-Bta-013051	Bos taurus	72.70	0.00e+00	1045.00
IUUC-Bdi-014519	Brachypodium distachyon	28.75	8.00e-23	101.00
IUUC-Bol-015271	Brassica oleracea	31.43	2.00e-33	137.00
IUUC-Bra-017931	Brassica rapa	30.79	2.00e-32	134.00
IUUC-Cja-019240	Callithrix jacchus	76.20	0.00e+00	1097.00
IUUC-Cfa-021010	Canis familiaris	83.05	0.00e+00	1202.00
IUUC-Cpo-022308	Cavia porcellus	72.70	0.00e+00	976.00
IUUC-Csa-023501	Chlorocebus sabaeus	76.06	0.00e+00	1133.00
IUUC-Cho-024900	Choloepus hoffmanni	70.75	0.00e+00	1000.00
IUUC-Cin-025403	Ciona intestinalis	37.64	8.00e-95	341.00
IUUC-Csv-025819	Ciona savignyi	36.82	1.00e-42	166.00
IUUC-Cme-027123	Cyanidioschyzon merolae	24.28	2.00e-18	87.00
IUUC-Dre-028354	Danio rerio	56.94	3.00e-165	575.00
IUUC-Dno-029400	Dasypus novemcinctus	74.71	0.00e+00	1068.00
IUUC-Dor-030320	Dipodomys ordii	71.50	0.00e+00	832.00
IUUC-Dme-031949	Drosophila melanogaster	27.62	2.00e-43	170.00
IUUC-Ete-032691	Echinops telfairi	59.34	2.00e-147	515.00
IUUC-Eca-034320	Equus caballus	82.38	0.00e+00	1225.00
IUUC-Fal-036648	Ficedula albicollis	69.75	0.00e+00	735.00
IUUC-Gmo-038609	Gadus morhua	58.00	1.00e-141	496.00
IUUC-Gga-040522	Gallus gallus	68.50	2.00e-108	386.00
IUUC-Gac-042318	Gasterosteus aculeatus	55.40	1.00e-132	466.00
IUUC-Gma-043184	Glycine max	25.37	3.00e-24	107.00
IUUC-Ggo-044464	Gorilla gorilla	75.93	0.00e+00	1130.00
IUUC-Hsa-045991	Homo sapiens	75.80	0.00e+00	1127.00
IUUC-Hvu-047705	Hordeum vulgare	25.34	5.00e-29	122.00
IUUC-Itr-047977	Ictidomys tridecemlineatus	76.03	0.00e+00	1134.00
IUUC-Lch-050112	Latimeria chalumnae	59.03	0.00e+00	693.00
IUUC-Lpe-051605	Leersia perrieri	28.08	4.00e-20	93.20
IUUC-Loc-052241	Lepisosteus oculatus	62.73	0.00e+00	645.00
IUUC-Laf-054559	Loxodonta africana	76.44	0.00e+00	972.00
IUUC-Mcc-055093	Macaca mulatta	75.68	0.00e+00	1126.00
IUUC-Meu-056417	Macropus eugenii	65.62	0.00e+00	679.00
IUUC-Mtr-058533	Medicago truncatula	26.28	4.00e-29	122.00
IUUC-Mga-059498	Meleagris gallopavo	61.84	0.00e+00	713.00
IUUC-Mmr-061782	Microcebus murinus	75.22	0.00e+00	1119.00
IUUC-Mdo-062053	Monodelphis domestica	60.51	0.00e+00	815.00
IUUC-Mmu-063352	Mus musculus	68.93	0.00e+00	989.00
IUUC-Mac-064582	Musa acuminata	27.42	5.00e-22	99.40
IUUC-Mpu-066087	Mustela putorius furo	81.27	0.00e+00	1192.00
IUUC-Mlu-068147	Myotis lucifugus	74.83	0.00e+00	1045.00
IUUC-Nle-069503	Nomascus leucogenys	72.33	0.00e+00	1061.00
IUUC-Opr-070479	Ochotona princeps	67.57	0.00e+00	976.00
IUUC-Ont-071700	Oreochromis niloticus	57.79	2.00e-170	592.00
IUUC-Oan-073702	Ornithorhynchus anatinus	75.30	0.00e+00	795.00
IUUC-Ocu-074886	Oryctolagus cuniculus	73.81	0.00e+00	1095.00
IUUC-Oba-075729	Oryza barthii	26.05	6.00e-25	108.00
IUUC-Obr-076562	Oryza brachyantha	27.67	6.00e-23	102.00
IUUC-Ogl-077615	Oryza glaberrima	26.05	6.00e-25	108.00
IUUC-Ogu-078921	Oryza glumaepatula	26.24	8.00e-27	115.00
IUUC-Oin-079250	Oryza indica	26.23	4.00e-19	89.70
IUUC-Olo-080758	Oryza longistaminata	24.95	5.00e-24	105.00
IUUC-Ome-081707	Oryza meridionalis	26.12	2.00e-20	94.00
IUUC-Oni-083006	Oryza nivara	26.24	2.00e-26	114.00
IUUC-Opu-083650	Oryza punctata	26.15	3.00e-26	113.00
IUUC-Oru-084924	Oryza rufipogon	26.49	2.00e-27	116.00
IUUC-Osa-085820	Oryza sativa	26.24	2.00e-26	114.00
IUUC-Ola-087229	Oryzias latipes	55.56	6.00e-136	477.00
IUUC-Oga-088243	Otolemur garnettii	75.85	0.00e+00	1045.00
IUUC-Oar-089461	Ovis aries	75.35	0.00e+00	1127.00
IUUC-Ptr-090527	Pan troglodytes	75.93	0.00e+00	1125.00
IUUC-Pan-092431	Papio anubis	75.34	0.00e+00	1044.00
IUUC-Psi-093156	Pelodiscus sinensis	70.87	0.00e+00	774.00
IUUC-Pno-094897	Phaeosphaeria nodorum	22.03	4.00e-07	48.90
IUUC-Ppa-095305	Physcomitrella patens	38.58	3.00e-20	94.40
IUUC-Pfo-097065	Poecilia formosa	57.49	2.00e-164	572.00
IUUC-Pab-098272	Pongo abelii	76.19	0.00e+00	1135.00
IUUC-Pop-099827	Populus trichocarpa	24.85	7.00e-31	128.00
IUUC-Pca-100713	Procavia capensis	64.12	0.00e+00	924.00
IUUC-Ppe-102103	Prunus persica	26.56	1.00e-32	134.00
IUUC-Pva-103133	Pteropus vampyrus	88.14	0.00e+00	773.00
IUUC-Pte-104191	Pyrenophora teres	50.00	1.00e-07	50.40
IUUC-Pyt-104734	Pyrenophora triticirepentis	48.00	2.00e-07	49.70
IUUC-Sha-107628	Sarcophilus harrisii	60.86	0.00e+00	827.00
IUUC-Sit-109781	Setaria italica	28.94	1.00e-25	110.00
IUUC-Sly-111779	Solanum lycopersicum	29.34	1.00e-30	127.00
IUUC-Stu-112817	Solanum tuberosum	39.34	2.00e-18	85.90
IUUC-Sar-113124	Sorex araneus	64.94	0.00e+00	706.00
IUUC-Sbi-114107	Sorghum bicolor	26.50	7.00e-31	128.00
IUUC-Ssc-115850	Sus scrofa	77.09	0.00e+00	1141.00
IUUC-Tgu-117295	Taeniopygia guttata	71.49	0.00e+00	739.00
IUUC-Tru-117539	Takifugu rubripes	57.06	2.00e-166	578.00
IUUC-Tsy-118805	Tarsius syrichta	55.31	3.00e-112	399.00
IUUC-Tni-120274	Tetraodon nigroviridis	57.78	1.00e-166	578.00
IUUC-Tca-121162	Theobroma cacao	30.49	2.00e-31	130.00
IUUC-Tae-124822	Triticum aestivum	24.95	3.00e-30	126.00
IUUC-Tur-126162	Triticum urartu	23.06	4.00e-19	90.10
IUUC-Tbe-127884	Tupaia belangeri	71.11	8.00e-84	304.00
IUUC-Ttr-128665	Tursiops truncatus	70.60	3.00e-148	519.00
IUUC-Vpa-130385	Vicugna pacos	80.67	0.00e+00	1152.00
IUUC-Vvi-131464	Vitis vinifera	28.34	1.00e-23	104.00
IUUC-Xtr-132015	Xenopus tropicalis	58.94	0.00e+00	726.00
IUUC-Xma-133109	Xiphophorus maculatus	58.32	1.00e-165	576.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence