iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115553

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU694720

Gene Name

YOD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000015659.2	ENSSSCT00000017057.2	ENSSSCP00000016602.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/OTU	31.62	4.00e-35	143.00	IUUC-Sce-106323
ULD/UDP/UFD/UBX	31.62	4.00e-35	143.00	IUUC-Sce-106323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MFGPAKGGHF GVPREAGFPG GVSQRAAGTK AGSTGVWPMG GQSDTMWRLR CKAKDGTHVL 60
QGLSSRTRVR ELQGQIAAIT GIAPDCQRIL VGYPPECLDL SEGDTILGDL PIQSGDMLIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGTTCTAC AGGCAGCAAG ACTAGCCGCA CTTTAGGAAT ACGGCTAAAT CATCACCCTT 60
TGCCACCTAA AGTAGGGGTG GGTGGGAACT AGTTGTCACT TTAAGAATAG GCTAAGACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR003323--OTU_dom
IPR029071--Ubiquitin-rel_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50802--OTU
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF02338--OTU

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:1990380--F:Lys48-specific deubiquitinase activity
GO:0046872--F:metal ion binding
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:1904265--F:ubiquitin-specific protease activity involved in negative regulation of retrograde protein transport, ER to cytosol
GO:0030968--P:endoplasmic reticulum unfolded protein response
GO:0016579--P:protein deubiquitination
GO:0035871--P:protein K11-linked deubiquitination
GO:1990167--P:protein K27-linked deubiquitination
GO:0035523--P:protein K29-linked deubiquitination
GO:1990168--P:protein K33-linked deubiquitination
GO:0070536--P:protein K63-linked deubiquitination
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000271	Aegilops tauschii	47.62	5.00e-44	170.00
IUUC-Aml-001860	Ailuropoda melanoleuca	93.97	0.00e+00	667.00
IUUC-Atr-002548	Amborella trichopoda	50.00	8.00e-50	189.00
IUUC-Apl-004025	Anas platyrhynchos	78.75	5.00e-104	369.00
IUUC-Aca-004505	Anolis carolinensis	75.00	3.00e-137	480.00
IUUC-Aly-005999	Arabidopsis lyrata	44.50	8.00e-47	179.00
IUUC-Ath-006774	Arabidopsis thaliana	45.45	2.00e-47	181.00
IUUC-Ago-007741	Ashbya gossypii	37.98	3.00e-37	148.00
IUUC-Acl-008278	Aspergillus clavatus	40.98	1.00e-41	162.00
IUUC-Afl-008710	Aspergillus flavus	43.20	2.00e-42	166.00
IUUC-Afu-009009	Aspergillus fumigatus	41.95	1.00e-42	166.00
IUUC-Ani-009430	Aspergillus nidulans	32.73	2.00e-40	159.00
IUUC-Ang-009508	Aspergillus niger	40.86	1.00e-36	146.00
IUUC-Aor-009992	Aspergillus oryzae	34.93	3.00e-43	168.00
IUUC-Ate-010440	Aspergillus terreus	34.77	1.00e-44	173.00
IUUC-Ame-011038	Astyanax mexicanus	71.80	6.00e-128	449.00
IUUC-Bgr-012262	Blumeria graminis	34.70	4.00e-35	141.00
IUUC-Bta-012864	Bos taurus	91.38	0.00e+00	654.00
IUUC-Bci-013986	Botrytis cinerea	35.24	2.00e-35	142.00
IUUC-Bdi-014194	Brachypodium distachyon	49.76	4.00e-50	190.00
IUUC-Bol-016166	Brassica oleracea	46.12	1.00e-47	182.00
IUUC-Bra-017783	Brassica rapa	46.60	4.00e-48	183.00
IUUC-Cja-019488	Callithrix jacchus	91.38	0.00e+00	649.00
IUUC-Cpo-021728	Cavia porcellus	89.94	0.00e+00	652.00
IUUC-Cre-022819	Chlamydomonas reinhardtii	46.08	2.00e-42	164.00
IUUC-Csa-024237	Chlorocebus sabaeus	95.38	3.00e-170	590.00
IUUC-Cho-024544	Choloepus hoffmanni	90.52	0.00e+00	646.00
IUUC-Cin-025549	Ciona intestinalis	44.59	4.00e-73	267.00
IUUC-Cgl-026552	Colletotrichum gloeosporioides	31.74	2.00e-34	139.00
IUUC-Cne-027022	Cryptococcus neoformans	43.56	1.00e-43	169.00
IUUC-Cme-027196	Cyanidioschyzon merolae	37.61	7.00e-46	177.00
IUUC-Dre-027799	Danio rerio	70.96	1.00e-121	428.00
IUUC-Dno-029863	Dasypus novemcinctus	90.23	0.00e+00	650.00
IUUC-Dor-030804	Dipodomys ordii	83.95	8.00e-169	585.00
IUUC-Dse-031494	Dothistroma septosporum	31.90	6.00e-42	164.00
IUUC-Dme-032065	Drosophila melanogaster	54.23	3.00e-61	228.00
IUUC-Ete-033193	Echinops telfairi	89.08	1.00e-179	621.00
IUUC-Eca-033993	Equus caballus	92.53	0.00e+00	661.00
IUUC-Fca-035949	Felis catus	94.54	0.00e+00	676.00
IUUC-Fal-037473	Ficedula albicollis	76.69	8.00e-101	358.00
IUUC-Fox-037779	Fusarium oxysporum	31.68	3.00e-29	122.00
IUUC-Fso-038370	Fusarium solani	30.00	3.00e-29	122.00
IUUC-Gmo-038778	Gadus morhua	58.22	5.00e-92	330.00
IUUC-Ggr-039940	Gaeumannomyces graminis	33.33	6.00e-35	140.00
IUUC-Gga-041102	Gallus gallus	72.04	2.00e-124	438.00
IUUC-Gac-041954	Gasterosteus aculeatus	68.61	6.00e-124	436.00
IUUC-Gma-043608	Glycine max	47.57	3.00e-48	184.00
IUUC-Ggo-044753	Gorilla gorilla	91.67	0.00e+00	651.00
IUUC-Hsa-045714	Homo sapiens	90.49	1.00e-160	558.00
IUUC-Hvu-047600	Hordeum vulgare	48.29	1.00e-50	192.00
IUUC-Itr-048026	Ictidomys tridecemlineatus	92.24	0.00e+00	662.00
IUUC-Kpa-049360	Komagataella pastoris	31.18	7.00e-39	153.00
IUUC-Lch-049900	Latimeria chalumnae	73.03	1.00e-123	435.00
IUUC-Lpe-050984	Leersia perrieri	39.50	6.00e-32	129.00
IUUC-Loc-052567	Lepisosteus oculatus	71.15	1.00e-129	455.00
IUUC-Lma-053247	Leptosphaeria maculans	31.80	9.00e-41	160.00
IUUC-Laf-053361	Loxodonta africana	91.09	3.00e-178	616.00
IUUC-Meu-056137	Macropus eugenii	76.29	3.00e-149	520.00
IUUC-Mor-057191	Magnaporthe oryzae	28.32	1.00e-26	113.00
IUUC-Mpo-057565	Magnaporthe poae	39.09	5.00e-32	130.00
IUUC-Mtr-058196	Medicago truncatula	48.54	1.00e-48	185.00
IUUC-Mla-059096	Melampsora laricipopulina	42.13	1.00e-38	153.00
IUUC-Mga-059489	Meleagris gallopavo	79.24	3.00e-110	390.00
IUUC-Mvi-060300	Microbotryum violaceum	36.73	1.00e-41	163.00
IUUC-Mmr-061618	Microcebus murinus	93.94	8.00e-166	575.00
IUUC-Mdo-061909	Monodelphis domestica	87.42	1.00e-161	562.00
IUUC-Mmu-063434	Mus musculus	87.93	8.00e-180	622.00
IUUC-Mac-064676	Musa acuminata	49.03	2.00e-50	191.00
IUUC-Mpu-066733	Mustela putorius furo	93.39	0.00e+00	662.00
IUUC-Mlu-066990	Myotis lucifugus	88.32	0.00e+00	635.00
IUUC-Nfi-068249	Neosartorya fischeri	42.44	4.00e-43	168.00
IUUC-Ncr-068764	Neurospora crassa	33.23	3.00e-33	135.00
IUUC-Nle-069094	Nomascus leucogenys	91.67	0.00e+00	649.00
IUUC-Oan-073585	Ornithorhynchus anatinus	86.18	2.00e-157	547.00
IUUC-Oba-075949	Oryza barthii	48.54	3.00e-48	184.00
IUUC-Obr-076096	Oryza brachyantha	48.54	5.00e-49	186.00
IUUC-Ogl-077106	Oryza glaberrima	48.06	1.00e-47	182.00
IUUC-Ogu-078024	Oryza glumaepatula	48.54	4.00e-48	183.00
IUUC-Oin-079635	Oryza indica	47.57	5.00e-48	183.00
IUUC-Olo-080299	Oryza longistaminata	48.54	6.00e-48	183.00
IUUC-Ome-081359	Oryza meridionalis	48.54	3.00e-48	184.00
IUUC-Oni-082459	Oryza nivara	49.28	9.00e-48	182.00
IUUC-Opu-083167	Oryza punctata	49.51	1.00e-49	189.00
IUUC-Oru-084577	Oryza rufipogon	47.57	5.00e-48	183.00
IUUC-Osa-085746	Oryza sativa	52.94	1.00e-11	60.50
IUUC-Ola-086890	Oryzias latipes	69.84	1.00e-125	441.00
IUUC-Olu-087585	Ostreococcus lucimarinus	42.29	5.00e-43	166.00
IUUC-Oga-088190	Otolemur garnettii	91.35	7.00e-170	589.00
IUUC-Oar-089631	Ovis aries	91.67	0.00e+00	657.00
IUUC-Pan-091892	Papio anubis	91.67	0.00e+00	648.00
IUUC-Pma-094491	Petromyzon marinus	52.23	2.00e-89	322.00
IUUC-Pno-094993	Phaeosphaeria nodorum	32.32	6.00e-42	164.00
IUUC-Ppa-095791	Physcomitrella patens	51.94	1.00e-52	198.00
IUUC-Pfo-096301	Poecilia formosa	70.49	3.00e-126	444.00
IUUC-Pab-097873	Pongo abelii	91.95	0.00e+00	654.00
IUUC-Pop-099482	Populus trichocarpa	47.09	1.00e-49	188.00
IUUC-Pca-100817	Procavia capensis	90.49	2.00e-161	561.00
IUUC-Ppe-101624	Prunus persica	49.76	1.00e-51	195.00
IUUC-Pva-102120	Pteropus vampyrus	91.38	0.00e+00	640.00
IUUC-Pgr-103368	Puccinia graminis	29.63	1.00e-40	160.00
IUUC-Ptt-103923	Puccinia triticina	40.18	5.00e-40	157.00
IUUC-Pte-104199	Pyrenophora teres	39.20	2.00e-40	159.00
IUUC-Pyt-104502	Pyrenophora triticirepentis	32.02	1.00e-41	162.00
IUUC-Rno-105605	Rattus norvegicus	89.37	8.00e-177	612.00
IUUC-Sce-106323	Saccharomyces cerevisiae	31.62	2.00e-31	129.00
IUUC-Sha-107176	Sarcophilus harrisii	88.21	5.00e-138	483.00
IUUC-Sja-107812	Schizosaccharomyces japonicus	38.53	8.00e-38	150.00
IUUC-Spo-108085	Schizosaccharomyces pombe	30.84	8.00e-41	160.00
IUUC-Smo-109050	Selaginella moellendorffii	47.09	4.00e-49	187.00
IUUC-Sit-110056	Setaria italica	47.32	1.00e-48	185.00
IUUC-Sly-111869	Solanum lycopersicum	50.29	9.00e-44	169.00
IUUC-Stu-112452	Solanum tuberosum	48.78	4.00e-50	190.00
IUUC-Sar-113629	Sorex araneus	82.79	1.00e-55	209.00
IUUC-Sbi-114422	Sorghum bicolor	48.06	7.00e-50	189.00
IUUC-Sre-115105	Sporisorium reilianum	40.80	1.00e-31	130.00
IUUC-Tgu-116921	Taeniopygia guttata	76.54	2.00e-100	358.00
IUUC-Tru-117830	Takifugu rubripes	68.87	1.00e-124	439.00
IUUC-Tsy-119320	Tarsius syrichta	92.24	0.00e+00	658.00
IUUC-Tni-119706	Tetraodon nigroviridis	67.33	2.00e-117	414.00
IUUC-Tca-121238	Theobroma cacao	48.54	2.00e-49	188.00
IUUC-Tae-124711	Triticum aestivum	48.54	3.00e-50	191.00
IUUC-Tme-126966	Tuber melanosporum	36.04	1.00e-51	196.00
IUUC-Tbe-127712	Tupaia belangeri	95.96	7.00e-110	388.00
IUUC-Ttr-129168	Tursiops truncatus	91.67	0.00e+00	662.00
IUUC-Uma-129461	Ustilago maydis	39.90	2.00e-37	149.00
IUUC-Vda-129890	Verticillium dahliae	36.61	3.00e-27	115.00
IUUC-Vpa-130616	Vicugna pacos	92.53	0.00e+00	662.00
IUUC-Vvi-131250	Vitis vinifera	48.06	8.00e-49	186.00
IUUC-Xtr-132126	Xenopus tropicalis	70.07	2.00e-129	454.00
IUUC-Xma-133596	Xiphophorus maculatus	70.16	3.00e-125	441.00
IUUC-Yli-134562	Yarrowia lipolytica	31.51	8.00e-34	137.00
IUUC-Zma-135205	Zea mays	47.57	5.00e-49	186.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence