iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107073

Ensembl Protein ID

ENSSHAP00000013945.1

UniProt Accession

G3WEU0; G3WEU0_SARHA

Genbank Protein ID

ENSSHAP00000013945

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01081913

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000011925.1	ENSSHAT00000014062.1	ENSSHAP00000013945.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.90e-19	69.3	170	207
ULD/UDP/UBQ/UBQ_PIM	1.30e-17	63.6	1	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 170  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 207
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 23   veelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    VKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 56
           899**************************************************997 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

VKALKEKIES EKGKDAFPVA GQKLIYAGKI LNDDTALKEY KIDEKNFVVV MVTKPKAAAT 60
STPSPATTQQ SNPATTTTVS SSSAASVAQA PTPSPALAPT PTPTSVTPTP AAAACEPIPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTAAGGCAC TGAAAGAGAA GATTGAATCT GAAAAGGGAA AGGATGCCTT TCCAGTAGCA 60
GGCCAAAAAT TAATTTATGC AGGTAATTAA TTATATCCTA CAAATGATTA AAACAATCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	86.45	2.00e-91	328.00
IUUC-Apl-003371	Anas platyrhynchos	76.88	2.00e-117	415.00
IUUC-Aca-004599	Anolis carolinensis	77.23	1.00e-111	396.00
IUUC-Aly-005498	Arabidopsis lyrata	38.71	8.00e-39	154.00
IUUC-Ath-006676	Arabidopsis thaliana	39.52	3.00e-39	155.00
IUUC-Afu-008877	Aspergillus fumigatus	44.53	1.00e-18	87.00
IUUC-Ate-010458	Aspergillus terreus	39.84	1.00e-28	120.00
IUUC-Bta-012922	Bos taurus	90.26	9.00e-90	323.00
IUUC-Bci-013933	Botrytis cinerea	49.62	3.00e-19	89.40
IUUC-Bra-017983	Brassica rapa	38.74	9.00e-38	150.00
IUUC-Cja-018772	Callithrix jacchus	86.15	8.00e-116	410.00
IUUC-Cfa-020683	Canis familiaris	83.90	9.00e-98	350.00
IUUC-Cpo-022145	Cavia porcellus	83.29	3.00e-114	405.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	35.94	3.00e-29	122.00
IUUC-Csa-023714	Chlorocebus sabaeus	87.44	5.00e-133	467.00
IUUC-Cho-024814	Choloepus hoffmanni	66.55	3.00e-73	268.00
IUUC-Csv-025823	Ciona savignyi	36.05	1.00e-30	126.00
IUUC-Cne-027056	Cryptococcus neoformans	58.70	5.00e-11	62.00
IUUC-Dre-028369	Danio rerio	71.09	8.00e-82	296.00
IUUC-Dno-029543	Dasypus novemcinctus	90.64	8.00e-96	343.00
IUUC-Dse-031336	Dothistroma septosporum	50.00	4.00e-17	82.40
IUUC-Ete-032583	Echinops telfairi	79.66	1.00e-63	236.00
IUUC-Eca-034243	Equus caballus	91.95	2.00e-89	322.00
IUUC-Eeu-034721	Erinaceus europaeus	87.21	9.00e-71	260.00
IUUC-Fca-035679	Felis catus	84.10	1.00e-113	402.00
IUUC-Fal-037148	Ficedula albicollis	80.65	9.00e-88	317.00
IUUC-Fox-037960	Fusarium oxysporum	43.61	2.00e-15	77.00
IUUC-Ggr-040116	Gaeumannomyces graminis	45.11	8.00e-16	77.80
IUUC-Gga-040544	Gallus gallus	73.47	9.00e-123	432.00
IUUC-Gma-043937	Glycine max	36.69	3.00e-38	152.00
IUUC-Ggo-045125	Gorilla gorilla	92.43	6.00e-98	350.00
IUUC-Hsa-046519	Homo sapiens	92.43	6.00e-98	350.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	85.39	9.00e-86	310.00
IUUC-Kpa-049314	Komagataella pastoris	36.55	8.00e-29	120.00
IUUC-Lch-050553	Latimeria chalumnae	66.58	2.00e-93	335.00
IUUC-Lpe-050929	Leersia perrieri	33.59	2.00e-33	136.00
IUUC-Loc-051748	Lepisosteus oculatus	74.68	4.00e-74	271.00
IUUC-Laf-054293	Loxodonta africana	90.26	4.00e-94	338.00
IUUC-Mcc-055600	Macaca mulatta	91.01	6.00e-104	370.00
IUUC-Meu-056082	Macropus eugenii	69.09	2.00e-72	266.00
IUUC-Mor-057287	Magnaporthe oryzae	47.15	3.00e-14	72.40
IUUC-Mpo-057609	Magnaporthe poae	45.31	4.00e-15	75.10
IUUC-Mtr-058148	Medicago truncatula	38.76	3.00e-39	155.00
IUUC-Mla-058961	Melampsora laricipopulina	46.62	4.00e-24	105.00
IUUC-Mga-060060	Meleagris gallopavo	42.53	2.00e-27	116.00
IUUC-Mvi-060220	Microbotryum violaceum	42.86	2.00e-21	96.70
IUUC-Mmr-061759	Microcebus murinus	84.40	3.00e-115	407.00
IUUC-Mdo-061967	Monodelphis domestica	97.43	2.00e-116	411.00
IUUC-Mmu-063258	Mus musculus	87.18	2.00e-100	358.00
IUUC-Mac-065180	Musa acuminata	37.35	3.00e-37	149.00
IUUC-Mpu-066389	Mustela putorius furo	88.05	6.00e-92	330.00
IUUC-Mlu-067999	Myotis lucifugus	88.48	8.00e-92	330.00
IUUC-Nfi-068390	Neosartorya fischeri	44.53	1.00e-18	87.00
IUUC-Ncr-068685	Neurospora crassa	45.11	3.00e-24	105.00
IUUC-Nle-069655	Nomascus leucogenys	85.90	1.00e-125	442.00
IUUC-Opr-070234	Ochotona princeps	98.21	1.00e-26	113.00
IUUC-Ocu-074831	Oryctolagus cuniculus	92.16	1.00e-92	333.00
IUUC-Ogu-078101	Oryza glumaepatula	34.87	8.00e-33	134.00
IUUC-Oin-079203	Oryza indica	32.93	2.00e-45	176.00
IUUC-Olo-080382	Oryza longistaminata	34.87	6.00e-33	134.00
IUUC-Ome-081652	Oryza meridionalis	34.87	8.00e-33	134.00
IUUC-Opu-083789	Oryza punctata	34.83	3.00e-33	135.00
IUUC-Osa-085951	Oryza sativa	32.93	2.00e-45	176.00
IUUC-Ola-086540	Oryzias latipes	63.71	9.00e-63	233.00
IUUC-Olu-087843	Ostreococcus lucimarinus	41.33	2.00e-37	149.00
IUUC-Oga-088023	Otolemur garnettii	92.59	3.00e-96	345.00
IUUC-Oar-089964	Ovis aries	89.14	3.00e-89	321.00
IUUC-Ptr-091165	Pan troglodytes	92.43	1.00e-97	349.00
IUUC-Pan-092009	Papio anubis	85.24	2.00e-123	435.00
IUUC-Psi-093477	Pelodiscus sinensis	88.10	1.00e-89	323.00
IUUC-Pno-095064	Phaeosphaeria nodorum	47.11	3.00e-13	69.30
IUUC-Ppa-095964	Physcomitrella patens	43.94	8.00e-27	114.00
IUUC-Pfo-097385	Poecilia formosa	63.03	5.00e-70	258.00
IUUC-Pab-097868	Pongo abelii	92.43	4.00e-97	347.00
IUUC-Pca-100652	Procavia capensis	91.50	1.00e-66	246.00
IUUC-Pva-102137	Pteropus vampyrus	91.80	6.00e-94	337.00
IUUC-Ptt-103717	Puccinia triticina	45.45	1.00e-25	110.00
IUUC-Pte-104303	Pyrenophora teres	50.00	2.00e-19	89.40
IUUC-Pyt-104580	Pyrenophora triticirepentis	50.00	3.00e-19	89.00
IUUC-Rno-104844	Rattus norvegicus	87.87	1.00e-100	360.00
IUUC-Sce-106214	Saccharomyces cerevisiae	62.50	1.00e-12	67.40
IUUC-Spo-108298	Schizosaccharomyces pombe	42.98	5.00e-38	151.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	44.14	9.00e-17	80.90
IUUC-Sly-111480	Solanum lycopersicum	40.49	8.00e-42	164.00
IUUC-Stu-112054	Solanum tuberosum	40.56	2.00e-38	152.00
IUUC-Sar-112925	Sorex araneus	79.85	4.00e-85	308.00
IUUC-Ssc-116329	Sus scrofa	89.89	1.00e-94	339.00
IUUC-Tgu-116918	Taeniopygia guttata	72.19	9.00e-117	413.00
IUUC-Tru-118651	Takifugu rubripes	60.74	6.00e-71	261.00
IUUC-Tsy-118836	Tarsius syrichta	92.65	3.00e-47	182.00
IUUC-Tre-121911	Trichoderma reesei	45.31	4.00e-16	78.60
IUUC-Tvi-122617	Trichoderma virens	45.31	5.00e-16	78.60
IUUC-Tme-127092	Tuber melanosporum	47.79	5.00e-20	91.70
IUUC-Tbe-127493	Tupaia belangeri	75.93	8.00e-65	240.00
IUUC-Ttr-128464	Tursiops truncatus	89.89	2.00e-94	338.00
IUUC-Uma-129484	Ustilago maydis	47.54	1.00e-11	64.30
IUUC-Vda-129946	Verticillium dahliae	45.86	3.00e-17	82.80
IUUC-Vpa-130357	Vicugna pacos	84.35	1.00e-61	229.00
IUUC-Vvi-130842	Vitis vinifera	36.90	4.00e-37	148.00
IUUC-Xtr-132679	Xenopus tropicalis	79.77	5.00e-69	254.00
IUUC-Xma-133503	Xiphophorus maculatus	52.93	3.00e-92	331.00
IUUC-Yli-134615	Yarrowia lipolytica	41.67	4.00e-36	145.00
IUUC-Zma-135929	Zea mays	31.25	2.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence