iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074013

Ensembl Protein ID

ENSOCUP00000010083.2

UniProt Accession

G1T1U8; G1T1U8_RABIT

Genbank Protein ID

ENSOCUP00000010083

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02044599

Gene Name

RYBP

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000011730.3	ENSOCUT00000011728.3	ENSOCUP00000010083.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	3.90e-14	51.9	71	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 1    aeaqWaCsaCTflNePeavkCemCsrpRgc 30
           +e++W+Cs+CTf+N++ea+kC++C+ ++g+
   Q: 71   DEGFWDCSVCTFRNSAEAFKCSICDVRKGT 100
           589*************************95 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

SLALPVPGKG GGWVVARAKF PAPDSCEITA AHSACVFAVS PSFSCSRSLP SPSPGSRLLR 60
RPKRQAKPAA DEGFWDCSVC TFRNSAEAFK CSICDVRKGT STRKPRINSQ LVAQQVAQQY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGCTCGCCC TTCCAGTTCC CGGGAAGGGG GGTGGGTGGG TGGTCGCGCG GGCGAAGTTT 60
CCAGCGCCGG ATTCCTGCGA AATTACGGCG GCTCACAGCG CCTGTGTTTT TGCTGTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome

Interpro

IPR033774--YAF2_RYBP
IPR001876--Znf_RanBP2

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF17219--YAF2_RYBP
PF00641--zf-RanBP

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0031519--C:PcG protein complex
GO:0003677--F:DNA binding
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0035518--P:histone H2A monoubiquitination
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002182	Ailuropoda melanoleuca	90.22	2.00e-71	261.00
IUUC-Apl-003475	Anas platyrhynchos	94.27	2.00e-61	228.00
IUUC-Aca-004725	Anolis carolinensis	93.58	7.00e-60	223.00
IUUC-Ame-011035	Astyanax mexicanus	87.76	1.00e-22	100.00
IUUC-Bta-012724	Bos taurus	99.24	3.00e-36	144.00
IUUC-Cja-019921	Callithrix jacchus	99.54	1.00e-63	235.00
IUUC-Cfa-020363	Canis familiaris	99.54	5.00e-62	230.00
IUUC-Cpo-022408	Cavia porcellus	100.00	1.00e-36	145.00
IUUC-Csa-023628	Chlorocebus sabaeus	99.54	1.00e-63	235.00
IUUC-Cho-024871	Choloepus hoffmanni	99.25	2.00e-39	154.00
IUUC-Cne-026853	Cryptococcus neoformans	43.48	8.40e-02	32.00
IUUC-Dre-027750	Danio rerio	95.92	2.00e-24	105.00
IUUC-Dno-029292	Dasypus novemcinctus	100.00	1.00e-36	145.00
IUUC-Dor-030691	Dipodomys ordii	100.00	1.00e-36	145.00
IUUC-Ete-032320	Echinops telfairi	98.62	7.00e-62	229.00
IUUC-Eca-034330	Equus caballus	99.54	3.00e-64	237.00
IUUC-Eeu-035193	Erinaceus europaeus	83.94	1.00e-43	169.00
IUUC-Fca-035645	Felis catus	100.00	1.00e-36	145.00
IUUC-Fal-036647	Ficedula albicollis	96.26	2.00e-58	218.00
IUUC-Gga-040262	Gallus gallus	96.33	3.00e-61	227.00
IUUC-Gac-041354	Gasterosteus aculeatus	91.67	1.00e-23	103.00
IUUC-Ggo-045026	Gorilla gorilla	100.00	1.00e-36	145.00
IUUC-Hsa-045860	Homo sapiens	93.53	1.00e-77	282.00
IUUC-Itr-048728	Ictidomys tridecemlineatus	97.71	8.00e-35	139.00
IUUC-Lch-050014	Latimeria chalumnae	83.19	2.00e-26	112.00
IUUC-Loc-051746	Lepisosteus oculatus	72.18	6.00e-63	233.00
IUUC-Laf-054352	Loxodonta africana	99.08	4.00e-62	230.00
IUUC-Mcc-055623	Macaca mulatta	94.24	9.00e-78	283.00
IUUC-Mor-057038	Magnaporthe oryzae	50.00	2.90e-01	30.00
IUUC-Mpo-057432	Magnaporthe poae	38.46	1.00e-01	31.60
IUUC-Mga-059812	Meleagris gallopavo	96.18	4.00e-34	137.00
IUUC-Mvi-060474	Microbotryum violaceum	40.00	7.00e-03	35.00
IUUC-Mmr-061669	Microcebus murinus	97.71	1.00e-41	162.00
IUUC-Mdo-061964	Monodelphis domestica	96.79	8.00e-62	229.00
IUUC-Mmu-063177	Mus musculus	99.54	1.00e-63	235.00
IUUC-Mac-065491	Musa acuminata	42.86	1.00e-03	36.20
IUUC-Mpu-065711	Mustela putorius furo	99.54	1.00e-63	235.00
IUUC-Mlu-067973	Myotis lucifugus	97.59	3.00e-17	80.50
IUUC-Nle-069817	Nomascus leucogenys	96.60	2.00e-67	248.00
IUUC-Opr-070623	Ochotona princeps	100.00	1.00e-36	145.00
IUUC-Ont-071994	Oreochromis niloticus	58.62	2.00e-43	169.00
IUUC-Oan-072949	Ornithorhynchus anatinus	96.79	4.00e-62	230.00
IUUC-Oar-090312	Ovis aries	99.24	3.00e-36	144.00
IUUC-Ptr-091316	Pan troglodytes	93.88	1.00e-75	276.00
IUUC-Pan-091877	Papio anubis	99.54	1.00e-63	235.00
IUUC-Psi-093195	Pelodiscus sinensis	93.45	8.00e-61	226.00
IUUC-Pfo-096909	Poecilia formosa	61.30	6.00e-44	170.00
IUUC-Pab-098578	Pongo abelii	93.55	2.00e-74	271.00
IUUC-Pca-100706	Procavia capensis	95.88	3.00e-42	164.00
IUUC-Pva-102682	Pteropus vampyrus	98.62	7.00e-61	226.00
IUUC-Rno-105156	Rattus norvegicus	89.62	2.00e-65	241.00
IUUC-Sha-107156	Sarcophilus harrisii	97.71	8.00e-35	139.00
IUUC-Sar-113234	Sorex araneus	93.49	6.00e-57	213.00
IUUC-Ssc-116262	Sus scrofa	100.00	1.00e-36	145.00
IUUC-Tgu-116730	Taeniopygia guttata	96.33	4.00e-61	227.00
IUUC-Tru-118642	Takifugu rubripes	91.67	5.00e-23	101.00
IUUC-Tsy-119328	Tarsius syrichta	100.00	1.00e-36	145.00
IUUC-Tni-120066	Tetraodon nigroviridis	58.40	3.00e-45	174.00
IUUC-Tvi-122470	Trichoderma virens	44.83	6.00e-03	35.40
IUUC-Tbe-127332	Tupaia belangeri	99.08	4.00e-63	233.00
IUUC-Ttr-128963	Tursiops truncatus	99.54	1.00e-63	235.00
IUUC-Vpa-130270	Vicugna pacos	98.45	2.00e-35	140.00
IUUC-Xtr-132256	Xenopus tropicalis	80.14	1.00e-30	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence