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Tag Content
UUCD2 ID IUUC-Ssc-115474
UUCD1 version UUC-SuS-00229
Ensembl Protein ID ENSSSCP00000027247.1
UniProt Accession F1RUA4; F1RUA4_PIG
Genbank Protein ID ENSSSCP00000027247
Protein Name Uncharacterized protein
Genbank Nucleotide ID FP102657
Gene Name RNF113A
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000022359.1 ENSSSCT00000023982.1 ENSSSCP00000027247.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 92.73 4.00e-167 584.00 IUUC-Hsa-047000
E3 activity/RING/RING 43.85 2.00e-48 189.00 IUUC-Osa-086166
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Sus scrofa
Protein Sequence
(Fasta)
MAEQLSPGKT TDQVCTFLFK KPGRKGAAGR RKRPICDQES GDSSSSSDEG STVVRPEKKR 60
ATHNPMIQKT RGSGKQKAAY GDLSSEEEEE ENEPESLGVV YKSTRSAKPV GPEDMGATAV 120
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Protein Fasta Sequence


>IUUC-Ssc-115474|E3,RING|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGCGCCGGGG CTCTCGAACG CTTGAACTCC CGCAGCCCTT TTTCAACCGG CGATTTTTGT 60
CCCGACTCGC GGCCGAGCGC ACGACGTGCA GTGACGTGAA GAAGCCCCGC GCCACCTAGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ssc-115474|E3,RING|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00642--zf-CCCH
SMART

SM00184--RING
SM00356--ZnF_C3H1
Gene Ontology

GO:0005684--C:U2-type spliceosomal complex
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0034247--P:snoRNA splicing
KEGG ssc:100514886
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000118 Aegilops tauschii 45.58 4.00e-50 192.00
IUUC-Aml-002002 Ailuropoda melanoleuca 91.98 4.00e-171 593.00
IUUC-Atr-003145 Amborella trichopoda 46.40 1.00e-51 196.00
IUUC-Apl-003440 Anas platyrhynchos 91.16 2.00e-120 424.00
IUUC-Aca-004421 Anolis carolinensis 78.41 6.00e-131 459.00
IUUC-Aly-006121 Arabidopsis lyrata 45.92 3.00e-53 201.00
IUUC-Ath-007493 Arabidopsis thaliana 45.49 9.00e-54 203.00
IUUC-Ago-007731 Ashbya gossypii 46.22 7.00e-30 123.00
IUUC-Acl-008186 Aspergillus clavatus 43.39 3.00e-43 168.00
IUUC-Afl-008484 Aspergillus flavus 38.31 2.00e-39 155.00
IUUC-Afu-008971 Aspergillus fumigatus 43.39 3.00e-43 168.00
IUUC-Ani-009499 Aspergillus nidulans 45.51 3.00e-41 161.00
IUUC-Ang-009717 Aspergillus niger 39.00 8.00e-43 167.00
IUUC-Aor-009898 Aspergillus oryzae 38.31 2.00e-39 155.00
IUUC-Ate-010508 Aspergillus terreus 41.67 4.00e-40 158.00
IUUC-Ame-011925 Astyanax mexicanus 74.64 1.00e-123 435.00
IUUC-Bgr-012259 Blumeria graminis 39.50 5.00e-42 164.00
IUUC-Bta-012490 Bos taurus 94.77 0.00e+00 627.00
IUUC-Bci-013882 Botrytis cinerea 41.57 5.00e-40 157.00
IUUC-Bdi-014084 Brachypodium distachyon 44.49 6.00e-50 190.00
IUUC-Bol-016607 Brassica oleracea 44.13 1.00e-52 200.00
IUUC-Bra-017747 Brassica rapa 38.42 5.00e-54 204.00
IUUC-Cel-018698 Caenorhabditis elegans 46.42 2.00e-67 249.00
IUUC-Cja-019434 Callithrix jacchus 91.27 5.00e-156 543.00
IUUC-Cfa-020902 Canis familiaris 93.10 3.00e-173 600.00
IUUC-Cre-022885 Chlamydomonas reinhardtii 38.53 8.00e-41 160.00
IUUC-Csa-023933 Chlorocebus sabaeus 69.74 5.00e-123 433.00
IUUC-Cho-024587 Choloepus hoffmanni 89.59 4.00e-132 463.00
IUUC-Cin-025328 Ciona intestinalis 69.01 5.00e-104 370.00
IUUC-Csv-026148 Ciona savignyi 70.00 2.00e-103 368.00
IUUC-Cgl-026700 Colletotrichum gloeosporioides 40.88 1.00e-33 136.00
IUUC-Cne-026816 Cryptococcus neoformans 42.42 2.00e-41 162.00
IUUC-Dre-027744 Danio rerio 71.17 7.00e-125 439.00
IUUC-Dse-031155 Dothistroma septosporum 48.23 1.00e-36 146.00
IUUC-Dme-031788 Drosophila melanogaster 61.40 8.00e-99 353.00
IUUC-Ete-033013 Echinops telfairi 88.95 2.00e-146 511.00
IUUC-Eca-033460 Equus caballus 94.20 2.00e-171 594.00
IUUC-Fca-035525 Felis catus 91.88 2.00e-171 594.00
IUUC-Fal-037206 Ficedula albicollis 81.65 4.00e-129 453.00
IUUC-Fox-037959 Fusarium oxysporum 35.58 4.00e-37 148.00
IUUC-Fso-038348 Fusarium solani 31.72 5.00e-39 154.00
IUUC-Gmo-038718 Gadus morhua 66.25 5.00e-119 420.00
IUUC-Ggr-040114 Gaeumannomyces graminis 37.04 3.00e-42 165.00
IUUC-Gga-041037 Gallus gallus 81.62 7.00e-134 469.00
IUUC-Gac-042103 Gasterosteus aculeatus 70.00 5.00e-122 430.00
IUUC-Gma-043581 Glycine max 45.61 1.00e-56 213.00
IUUC-Ggo-044906 Gorilla gorilla 92.73 2.00e-167 580.00
IUUC-Hsa-047000 Homo sapiens 92.73 2.00e-167 580.00
IUUC-Hvu-047578 Hordeum vulgare 46.36 3.00e-23 99.80
IUUC-Itr-048102 Ictidomys tridecemlineatus 91.30 2.00e-171 594.00
IUUC-Kpa-049320 Komagataella pastoris 41.04 4.00e-35 140.00
IUUC-Lch-050488 Latimeria chalumnae 72.90 1.00e-134 472.00
IUUC-Lpe-051156 Leersia perrieri 42.45 1.00e-46 179.00
IUUC-Loc-052670 Lepisosteus oculatus 77.01 4.00e-129 453.00
IUUC-Lma-053326 Leptosphaeria maculans 42.20 4.00e-38 152.00
IUUC-Laf-053570 Loxodonta africana 90.99 2.00e-171 593.00
IUUC-Mcc-055375 Macaca mulatta 93.64 3.00e-161 560.00
IUUC-Meu-056191 Macropus eugenii 77.84 1.00e-140 492.00
IUUC-Mor-057193 Magnaporthe oryzae 38.81 1.00e-37 150.00
IUUC-Mpo-057603 Magnaporthe poae 42.25 6.00e-40 157.00
IUUC-Mtr-058182 Medicago truncatula 49.33 2.00e-56 212.00
IUUC-Mla-058921 Melampsora laricipopulina 42.01 1.00e-35 142.00
IUUC-Mga-059281 Meleagris gallopavo 82.02 2.00e-131 461.00
IUUC-Mvi-060317 Microbotryum violaceum 42.39 1.00e-37 150.00
IUUC-Mmr-061744 Microcebus murinus 94.20 4.00e-170 590.00
IUUC-Mmu-064400 Mus musculus 88.63 2.00e-160 558.00
IUUC-Mac-065265 Musa acuminata 42.80 4.00e-47 181.00
IUUC-Mpu-066867 Mustela putorius furo 90.20 9.00e-169 585.00
IUUC-Mlu-067828 Myotis lucifugus 89.37 8.00e-164 568.00
IUUC-Nfi-068575 Neosartorya fischeri 41.27 2.00e-39 155.00
IUUC-Ncr-068828 Neurospora crassa 41.40 7.00e-39 154.00
IUUC-Nle-069137 Nomascus leucogenys 92.15 2.00e-166 577.00
IUUC-Ont-071497 Oreochromis niloticus 69.79 2.00e-126 444.00
IUUC-Oan-073182 Ornithorhynchus anatinus 76.95 1.00e-128 452.00
IUUC-Ocu-073949 Oryctolagus cuniculus 93.02 4.00e-170 590.00
IUUC-Oba-075693 Oryza barthii 43.03 2.00e-46 178.00
IUUC-Obr-076128 Oryza brachyantha 42.00 5.00e-46 177.00
IUUC-Ogl-077323 Oryza glaberrima 43.03 2.00e-46 178.00
IUUC-Ogu-078766 Oryza glumaepatula 43.03 2.00e-46 178.00
IUUC-Oin-080054 Oryza indica 43.03 2.00e-46 178.00
IUUC-Olo-080325 Oryza longistaminata 43.12 1.00e-38 153.00
IUUC-Ome-081331 Oryza meridionalis 42.04 1.00e-46 180.00
IUUC-Oni-082786 Oryza nivara 43.03 3.00e-46 178.00
IUUC-Opu-083855 Oryza punctata 43.21 1.00e-46 180.00
IUUC-Oru-084304 Oryza rufipogon 43.03 2.00e-46 178.00
IUUC-Osa-086166 Oryza sativa 42.21 2.00e-46 178.00
IUUC-Ola-086368 Oryzias latipes 65.05 4.00e-120 424.00
IUUC-Olu-087624 Ostreococcus lucimarinus 40.74 2.00e-46 178.00
IUUC-Oga-088080 Otolemur garnettii 92.15 1.00e-168 585.00
IUUC-Oar-089934 Ovis aries 96.06 8.00e-176 608.00
IUUC-Ptr-090827 Pan troglodytes 92.73 1.00e-167 581.00
IUUC-Pan-092245 Papio anubis 93.64 3.00e-161 560.00
IUUC-Psi-093790 Pelodiscus sinensis 83.82 3.00e-137 480.00
IUUC-Pma-094326 Petromyzon marinus 68.04 3.00e-118 417.00
IUUC-Pno-095057 Phaeosphaeria nodorum 41.25 7.00e-38 150.00
IUUC-Ppa-095690 Physcomitrella patens 46.34 9.00e-56 210.00
IUUC-Pfo-097026 Poecilia formosa 70.26 7.00e-125 439.00
IUUC-Pab-098689 Pongo abelii 92.15 2.00e-166 578.00
IUUC-Pca-100687 Procavia capensis 90.41 1.00e-153 535.00
IUUC-Ppe-101155 Prunus persica 45.60 2.00e-55 208.00
IUUC-Pgr-103440 Puccinia graminis 41.70 5.00e-43 167.00
IUUC-Ptt-103893 Puccinia triticina 32.74 8.00e-30 124.00
IUUC-Pte-104377 Pyrenophora teres 45.27 1.00e-38 152.00
IUUC-Pyt-104731 Pyrenophora triticirepentis 45.95 2.00e-38 152.00
IUUC-Rno-105967 Rattus norvegicus 88.63 1.00e-170 592.00
IUUC-Sce-106215 Saccharomyces cerevisiae 42.86 3.00e-36 145.00
IUUC-Sha-107587 Sarcophilus harrisii 74.93 1.00e-138 485.00
IUUC-Sja-107955 Schizosaccharomyces japonicus 42.27 4.00e-41 162.00
IUUC-Spo-108336 Schizosaccharomyces pombe 39.34 5.00e-35 142.00
IUUC-Smo-109109 Selaginella moellendorffii 41.46 2.00e-51 196.00
IUUC-Sit-110234 Setaria italica 43.10 2.00e-48 185.00
IUUC-Sly-111790 Solanum lycopersicum 52.00 7.00e-44 169.00
IUUC-Stu-111994 Solanum tuberosum 40.23 6.00e-56 210.00
IUUC-Sar-113374 Sorex araneus 89.83 2.00e-163 567.00
IUUC-Sbi-114766 Sorghum bicolor 42.86 7.00e-51 193.00
IUUC-Sre-115021 Sporisorium reilianum 38.46 2.00e-48 185.00
IUUC-Tgu-116649 Taeniopygia guttata 77.74 7.00e-140 489.00
IUUC-Tru-117701 Takifugu rubripes 68.11 2.00e-122 431.00
IUUC-Tni-120607 Tetraodon nigroviridis 68.35 3.00e-120 424.00
IUUC-Tca-121278 Theobroma cacao 45.25 7.00e-45 174.00
IUUC-Tre-122006 Trichoderma reesei 33.33 1.00e-32 133.00
IUUC-Tvi-122670 Trichoderma virens 38.80 3.00e-37 148.00
IUUC-Tae-122716 Triticum aestivum 45.58 4.00e-50 191.00
IUUC-Tur-126208 Triticum urartu 43.93 4.00e-50 191.00
IUUC-Tme-126908 Tuber melanosporum 42.68 5.00e-38 151.00
IUUC-Tbe-127394 Tupaia belangeri 95.06 1.00e-170 591.00
IUUC-Uma-129339 Ustilago maydis 43.08 1.00e-47 183.00
IUUC-Vda-129895 Verticillium dahliae 43.50 6.00e-40 157.00
IUUC-Vpa-130519 Vicugna pacos 89.33 2.00e-146 510.00
IUUC-Vvi-131382 Vitis vinifera 46.02 7.00e-51 193.00
IUUC-Xtr-131923 Xenopus tropicalis 70.52 9.00e-130 456.00
IUUC-Xma-133705 Xiphophorus maculatus 69.44 2.00e-127 447.00
IUUC-Yli-134518 Yarrowia lipolytica 48.57 2.00e-34 139.00
IUUC-Zma-135029 Zea mays 45.54 5.00e-44 171.00
Created Date 25-Jun-2017

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