iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014718

Ensembl Protein ID

BRADI1G43980.1

UniProt Accession

I1GZ66; I1GZ66_BRADI

Genbank Protein ID

KQK18671.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100838271; BRADI_1g43980

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G43980	BRADI1G43980.1	BRADI1G43980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	4.90e-22	77.9	168	209
ULD/UDP/UBQ/UBQ_PIM	2.40e-22	79.2	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ ++ + +MG   ++r+ +++aLraa+nn+e+A++yL++g
   Q: 168  LEQTVQHILDMGggtWERDMVVRALRAAYNNPERAIDYLYSG 209
           6899***********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkl+vktlkg++fe+e+s++ +v+e+K  i+  +g   +p++qq LI++GkiLkDdttL+ +++ ++s+++++++k+k
   Q: 1    MKLFVKTLKGTNFEIEASPEASVAEVKRIIEGAQGqnvYPADQQMLIHQGKILKDDTTLEGNNVAENSFLVIMLSKAK 78
           99*************************************************************************987 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MKLFVKTLKG TNFEIEASPE ASVAEVKRII EGAQGQNVYP ADQQMLIHQG KILKDDTTLE 60
GNNVAENSFL VIMLSKAKAS PSGPSTASKA PTIQAQPATP VAAATPSGPA TPVARTPPST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCTCCCCA CTGGAGGCGA AGTCAAGGTG AAAACCCTCA AGGCGAAGCA AGACTCAGAT 60
AGGGATAGCG CGAGTTTGTT GTAGAGAGAG AAGTTTGAGC AAGAGGGTGG AGGAGAAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100838271

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000126	Aegilops tauschii	74.19	2.00e-131	461.00
IUUC-Ago-007830	Ashbya gossypii	26.98	4.00e-17	81.60
IUUC-Ani-009460	Aspergillus nidulans	35.90	4.00e-32	131.00
IUUC-Bol-015354	Brassica oleracea	58.70	1.00e-101	362.00
IUUC-Csa-023183	Chlorocebus sabaeus	32.20	4.00e-36	144.00
IUUC-Cme-027260	Cyanidioschyzon merolae	29.75	6.00e-26	110.00
IUUC-Dme-032027	Drosophila melanogaster	29.78	1.00e-40	159.00
IUUC-Gac-042298	Gasterosteus aculeatus	31.91	3.00e-37	148.00
IUUC-Ggo-045084	Gorilla gorilla	31.72	1.00e-36	145.00
IUUC-Hsa-046614	Homo sapiens	31.72	1.00e-36	146.00
IUUC-Hvu-047788	Hordeum vulgare	80.66	2.00e-112	397.00
IUUC-Lch-049719	Latimeria chalumnae	32.12	5.00e-42	164.00
IUUC-Loc-051748	Lepisosteus oculatus	31.23	5.00e-38	150.00
IUUC-Mcc-055860	Macaca mulatta	32.20	4.00e-36	144.00
IUUC-Mvi-060220	Microbotryum violaceum	45.31	3.00e-22	99.00
IUUC-Oba-075951	Oryza barthii	81.06	2.00e-144	504.00
IUUC-Obr-076631	Oryza brachyantha	80.07	4.00e-98	350.00
IUUC-Ogl-077152	Oryza glaberrima	81.06	2.00e-144	504.00
IUUC-Ogu-078896	Oryza glumaepatula	81.06	6.00e-145	506.00
IUUC-Oin-079845	Oryza indica	77.46	2.00e-142	497.00
IUUC-Ome-081953	Oryza meridionalis	76.39	1.00e-137	481.00
IUUC-Oni-082569	Oryza nivara	77.70	1.00e-142	498.00
IUUC-Opu-083655	Oryza punctata	76.98	2.00e-135	474.00
IUUC-Oru-084989	Oryza rufipogon	77.70	1.00e-142	498.00
IUUC-Osa-085709	Oryza sativa	77.70	1.00e-142	498.00
IUUC-Oar-090387	Ovis aries	31.87	5.00e-36	144.00
IUUC-Ptr-090912	Pan troglodytes	31.65	1.00e-32	132.00
IUUC-Pan-092140	Papio anubis	32.20	3.00e-36	144.00
IUUC-Pfo-096607	Poecilia formosa	32.10	2.00e-39	155.00
IUUC-Pca-100348	Procavia capensis	31.48	1.00e-36	146.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	32.76	1.00e-39	156.00
IUUC-Spo-108298	Schizosaccharomyces pombe	32.69	1.00e-40	159.00
IUUC-Sit-110235	Setaria italica	84.58	1.00e-92	332.00
IUUC-Sly-111899	Solanum lycopersicum	61.56	5.00e-122	430.00
IUUC-Sbi-114835	Sorghum bicolor	75.79	1.00e-124	438.00
IUUC-Ssc-115460	Sus scrofa	32.53	2.00e-39	155.00
IUUC-Tca-121661	Theobroma cacao	59.12	1.00e-106	378.00
IUUC-Tae-125230	Triticum aestivum	77.54	4.00e-135	473.00
IUUC-Tur-126101	Triticum urartu	82.13	6.00e-102	363.00
IUUC-Xma-133503	Xiphophorus maculatus	31.13	5.00e-41	160.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence