iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000010164.1	ENSSHAT00000011939.1	ENSSHAP00000011842.1
ENSSHAG00000010164.1	ENSSHAT00000011940.1	ENSSHAP00000011843.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	1.00e-08	34.4	227	245
UBD/Alpha-Helix/UIM	4e-05	14.4	247	261

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEeee 19
           +++e Lq+AlalS+qE ++
   Q: 227  EDEENLQRALALSRQEIDM 245
           69**************886 PP

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlq 15
           dE+++L++A++lS+q
   Q: 247  DEEADLRRAIRLSMQ 261
           7*************9 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MESIFHEKQE GSLCAQHCLN NLLQGEYFSP VELSSIAHQL DEEERIRMAE GGVTSEDYRT 60
FLQQPSGNMD DSGFFSIQVI SNALKVWGLE LILFNSPEYQ RLGIDPINER SFICNYKEHW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGACAG AGCTGGGNNN NNNNNNNNNN NNNNNNNNNN NNNGGAGGGG CTGGAGGGGG 60
GTGGTTCGAC GCGGGGCGGT TGGCTCCAGA CAAATAAACA TGGAGTCCAT CTTCCACGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR033865--Ataxin-3
IPR006155--Josephin
IPR009068--S15_NS1_RNA-bd
IPR003903--UIM_dom

PROSITE

PS50957--JOSEPHIN
PS50330--UIM

Pfam

PF02099--Josephin
PF02809--UIM

SMART

SM01246--Josephin
SM00726--UIM

Gene Ontology

GO:0005759--C:mitochondrial matrix
GO:0031966--C:mitochondrial membrane
GO:0042405--C:nuclear inclusion body
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0034605--P:cellular response to heat
GO:0071218--P:cellular response to misfolded protein
GO:0035640--P:exploration behavior
GO:0006515--P:misfolded or incompletely synthesized protein catabolic process
GO:0035520--P:monoubiquitinated protein deubiquitination
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010810--P:regulation of cell-substrate adhesion

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002015	Ailuropoda melanoleuca	85.03	3.00e-171	593.00
IUUC-Atr-002735	Amborella trichopoda	50.00	3.00e-06	42.40
IUUC-Apl-003210	Anas platyrhynchos	77.87	7.00e-157	546.00
IUUC-Aca-005171	Anolis carolinensis	74.85	1.00e-139	488.00
IUUC-Aly-005625	Arabidopsis lyrata	44.64	2.00e-40	158.00
IUUC-Ath-007088	Arabidopsis thaliana	44.64	2.00e-40	159.00
IUUC-Ame-010715	Astyanax mexicanus	69.81	9.00e-124	436.00
IUUC-Bta-013538	Bos taurus	80.47	6.00e-171	592.00
IUUC-Bdi-015000	Brachypodium distachyon	42.01	1.00e-35	143.00
IUUC-Bol-015894	Brassica oleracea	44.05	2.00e-40	160.00
IUUC-Bra-018020	Brassica rapa	44.31	7.00e-41	161.00
IUUC-Cel-018121	Caenorhabditis elegans	34.80	7.00e-42	164.00
IUUC-Cja-018840	Callithrix jacchus	81.36	7.00e-163	566.00
IUUC-Cfa-021035	Canis familiaris	84.43	2.00e-175	607.00
IUUC-Cpo-021776	Cavia porcellus	79.84	3.00e-168	583.00
IUUC-Csa-023257	Chlorocebus sabaeus	66.67	1.00e-130	459.00
IUUC-Cho-024878	Choloepus hoffmanni	84.27	7.00e-169	585.00
IUUC-Cme-027158	Cyanidioschyzon merolae	31.22	8.00e-13	66.60
IUUC-Dre-027506	Danio rerio	65.88	1.00e-89	322.00
IUUC-Dno-029172	Dasypus novemcinctus	83.51	4.00e-173	600.00
IUUC-Dor-030900	Dipodomys ordii	92.72	3.00e-142	497.00
IUUC-Ete-033000	Echinops telfairi	56.05	7.00e-83	300.00
IUUC-Eca-034338	Equus caballus	83.57	1.00e-169	588.00
IUUC-Eeu-034585	Erinaceus europaeus	97.14	1.00e-56	213.00
IUUC-Fca-035441	Felis catus	77.78	2.00e-62	231.00
IUUC-Fal-037525	Ficedula albicollis	76.31	2.00e-146	511.00
IUUC-Gmo-039718	Gadus morhua	69.67	2.00e-111	394.00
IUUC-Gga-040774	Gallus gallus	78.36	3.00e-166	577.00
IUUC-Gac-041671	Gasterosteus aculeatus	68.90	1.00e-108	385.00
IUUC-Gma-042801	Glycine max	41.32	4.00e-37	148.00
IUUC-Ggo-044759	Gorilla gorilla	80.94	1.00e-135	475.00
IUUC-Hsa-046591	Homo sapiens	84.66	5.00e-160	556.00
IUUC-Hvu-047492	Hordeum vulgare	43.20	3.00e-34	138.00
IUUC-Itr-048851	Ictidomys tridecemlineatus	67.96	7.00e-116	409.00
IUUC-Lch-049519	Latimeria chalumnae	72.66	4.00e-119	420.00
IUUC-Lpe-050819	Leersia perrieri	43.27	1.00e-35	143.00
IUUC-Loc-051816	Lepisosteus oculatus	74.67	5.00e-132	463.00
IUUC-Laf-053784	Loxodonta africana	83.43	5.00e-176	609.00
IUUC-Mcc-055283	Macaca mulatta	85.05	2.00e-175	608.00
IUUC-Meu-056589	Macropus eugenii	81.11	4.00e-166	577.00
IUUC-Mtr-058233	Medicago truncatula	41.92	1.00e-36	147.00
IUUC-Mla-059013	Melampsora laricipopulina	39.90	7.00e-31	127.00
IUUC-Mga-059301	Meleagris gallopavo	78.08	1.00e-169	588.00
IUUC-Mmr-061038	Microcebus murinus	83.91	2.00e-176	611.00
IUUC-Mdo-062927	Monodelphis domestica	91.48	5.00e-171	593.00
IUUC-Mmu-063600	Mus musculus	77.41	4.00e-154	537.00
IUUC-Mpu-065897	Mustela putorius furo	86.67	4.00e-149	520.00
IUUC-Mlu-067543	Myotis lucifugus	88.18	1.00e-152	532.00
IUUC-Nle-069847	Nomascus leucogenys	79.02	4.00e-160	556.00
IUUC-Opr-070550	Ochotona princeps	75.35	2.00e-145	508.00
IUUC-Ont-071723	Oreochromis niloticus	68.47	3.00e-113	401.00
IUUC-Oan-073569	Ornithorhynchus anatinus	83.38	4.00e-176	610.00
IUUC-Ocu-074632	Oryctolagus cuniculus	83.43	4.00e-168	583.00
IUUC-Oba-075288	Oryza barthii	43.27	5.00e-38	151.00
IUUC-Obr-076050	Oryza brachyantha	42.69	8.00e-34	137.00
IUUC-Ogl-077174	Oryza glaberrima	43.27	5.00e-38	151.00
IUUC-Ogu-078006	Oryza glumaepatula	43.27	6.00e-38	150.00
IUUC-Oin-079278	Oryza indica	40.88	2.00e-35	142.00
IUUC-Olo-080941	Oryza longistaminata	43.27	6.00e-38	151.00
IUUC-Ome-081172	Oryza meridionalis	43.27	6.00e-38	150.00
IUUC-Oni-082239	Oryza nivara	43.27	5.00e-38	151.00
IUUC-Opu-083939	Oryza punctata	42.69	2.00e-37	149.00
IUUC-Oru-084393	Oryza rufipogon	43.27	5.00e-38	151.00
IUUC-Osa-086080	Oryza sativa	43.27	5.00e-38	151.00
IUUC-Ola-087566	Oryzias latipes	71.91	1.00e-111	395.00
IUUC-Oga-088617	Otolemur garnettii	66.48	3.00e-122	431.00
IUUC-Oar-090052	Ovis aries	80.00	1.00e-169	588.00
IUUC-Ptr-091435	Pan troglodytes	84.55	4.00e-176	610.00
IUUC-Pan-092742	Papio anubis	66.67	2.00e-130	458.00
IUUC-Psi-093313	Pelodiscus sinensis	90.23	3.00e-138	484.00
IUUC-Pma-094374	Petromyzon marinus	60.52	6.00e-86	310.00
IUUC-Ppa-095601	Physcomitrella patens	44.05	9.00e-44	170.00
IUUC-Pfo-097327	Poecilia formosa	71.10	3.00e-114	404.00
IUUC-Pab-098611	Pongo abelii	81.70	9.00e-142	495.00
IUUC-Pca-101022	Procavia capensis	97.32	3.00e-64	238.00
IUUC-Ppe-101545	Prunus persica	42.86	3.00e-38	152.00
IUUC-Pva-102844	Pteropus vampyrus	83.74	8.00e-174	602.00
IUUC-Pyt-104473	Pyrenophora triticirepentis	30.77	4.00e-03	36.60
IUUC-Rno-104896	Rattus norvegicus	79.18	1.00e-161	562.00
IUUC-Sit-110477	Setaria italica	43.86	3.00e-37	149.00
IUUC-Sly-111416	Solanum lycopersicum	39.13	7.00e-18	83.20
IUUC-Stu-112227	Solanum tuberosum	34.91	2.00e-20	91.70
IUUC-Sar-113534	Sorex araneus	75.83	4.00e-146	510.00
IUUC-Sbi-114751	Sorghum bicolor	42.77	7.00e-36	144.00
IUUC-Ssc-115274	Sus scrofa	85.32	4.00e-177	613.00
IUUC-Tgu-117426	Taeniopygia guttata	77.05	9.00e-153	532.00
IUUC-Tru-118059	Takifugu rubripes	71.48	9.00e-109	385.00
IUUC-Tsy-119448	Tarsius syrichta	81.19	8.00e-87	313.00
IUUC-Tni-120681	Tetraodon nigroviridis	88.37	6.00e-62	228.00
IUUC-Tca-121442	Theobroma cacao	37.50	1.00e-41	162.00
IUUC-Tae-123969	Triticum aestivum	42.11	3.00e-32	132.00
IUUC-Tbe-127638	Tupaia belangeri	79.61	7.00e-154	536.00
IUUC-Ttr-129288	Tursiops truncatus	75.55	9.00e-149	519.00
IUUC-Uma-129359	Ustilago maydis	38.22	3.00e-34	139.00
IUUC-Vpa-130788	Vicugna pacos	82.74	3.00e-169	587.00
IUUC-Vvi-131227	Vitis vinifera	42.51	6.00e-36	144.00
IUUC-Xtr-132147	Xenopus tropicalis	71.19	4.00e-140	490.00
IUUC-Xma-133144	Xiphophorus maculatus	70.00	1.00e-111	395.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence