iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099119

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_581750; POPTR_0008s22800g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s22800	POPTR_0008s22800.1	POPTR_0008s22800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-08	34.7	34	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl df      ++  ++  C H++++dC+ kw      s  + +CPlC+
   Q: 34   CPVCLKDFggeedyRRVAVIRVCLHAYCLDCIRKW------SDIKRKCPLCN 79
           ********98876666355566*************......**********7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MESSSSIASR RSKRQSQEKF LSKVILPAIR GQSCPVCLKD FGGEEDYRRV AVIRVCLHAY 60
CLDCIRKWSD IKRKCPLCNS EFNSWFCRII LSTRNFSTEK LPVVRESRRV TPLDILSSRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGAATGGA ATCGTCGTCT TCGATTGCCT CGCGGAGGTC AAAGAGACAG AGTCAAGAGA 60
AGTTCTTATC GAAAGTAATT TTGCCAGCAA TACGGGGGCA GTCATGTCCA GTATGCTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0008s22800g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002240	Ailuropoda melanoleuca	24.41	8.00e-13	69.30
IUUC-Aca-004984	Anolis carolinensis	26.62	3.00e-15	75.10
IUUC-Aly-005524	Arabidopsis lyrata	41.44	2.00e-38	151.00
IUUC-Ath-007668	Arabidopsis thaliana	50.72	3.00e-66	244.00
IUUC-Bta-012637	Bos taurus	25.00	6.00e-13	69.70
IUUC-Bol-015115	Brassica oleracea	46.53	3.00e-58	218.00
IUUC-Bra-017451	Brassica rapa	50.18	2.00e-58	218.00
IUUC-Cfa-021203	Canis familiaris	24.19	6.00e-13	69.70
IUUC-Cho-024870	Choloepus hoffmanni	24.09	7.00e-12	65.90
IUUC-Dre-027535	Danio rerio	25.08	5.00e-13	69.70
IUUC-Dno-028963	Dasypus novemcinctus	24.13	6.00e-11	63.20
IUUC-Ete-032300	Echinops telfairi	25.16	2.00e-13	70.90
IUUC-Eca-033690	Equus caballus	24.75	2.00e-13	70.90
IUUC-Eeu-035257	Erinaceus europaeus	24.09	2.00e-12	67.80
IUUC-Fca-036383	Felis catus	24.32	4.00e-12	67.00
IUUC-Gmo-039416	Gadus morhua	24.05	2.00e-14	72.80
IUUC-Gac-042227	Gasterosteus aculeatus	26.55	1.00e-15	77.40
IUUC-Itr-048818	Ictidomys tridecemlineatus	24.12	7.00e-12	65.90
IUUC-Lch-050031	Latimeria chalumnae	24.57	1.00e-11	65.50
IUUC-Laf-053820	Loxodonta africana	25.32	3.00e-13	70.50
IUUC-Meu-056806	Macropus eugenii	24.57	7.00e-13	68.60
IUUC-Mla-059139	Melampsora laricipopulina	23.61	2.00e-05	41.60
IUUC-Mvi-060417	Microbotryum violaceum	25.00	1.00e-07	52.00
IUUC-Mmu-064138	Mus musculus	24.19	2.00e-12	67.40
IUUC-Opr-071076	Ochotona princeps	24.26	1.00e-11	65.10
IUUC-Ont-072225	Oreochromis niloticus	25.35	5.00e-16	79.30
IUUC-Oan-073069	Ornithorhynchus anatinus	24.64	1.00e-14	73.90
IUUC-Ola-087377	Oryzias latipes	23.94	2.00e-13	69.30
IUUC-Oga-088059	Otolemur garnettii	25.00	4.00e-12	67.00
IUUC-Oar-089592	Ovis aries	24.74	8.00e-13	68.90
IUUC-Psi-093177	Pelodiscus sinensis	26.39	3.00e-15	74.70
IUUC-Ppa-095668	Physcomitrella patens	31.85	4.00e-32	131.00
IUUC-Pca-100967	Procavia capensis	24.76	4.00e-14	72.80
IUUC-Ppe-101922	Prunus persica	52.51	8.00e-59	219.00
IUUC-Pva-102982	Pteropus vampyrus	24.65	3.00e-12	67.00
IUUC-Pgr-103551	Puccinia graminis	24.56	4.00e-07	48.10
IUUC-Ptt-103977	Puccinia triticina	26.70	3.00e-07	48.10
IUUC-Rno-105730	Rattus norvegicus	24.23	1.00e-12	68.90
IUUC-Smo-109039	Selaginella moellendorffii	30.56	7.00e-30	124.00
IUUC-Ssc-115244	Sus scrofa	24.66	8.00e-13	69.30
IUUC-Tgu-117180	Taeniopygia guttata	24.92	3.00e-13	70.10
IUUC-Tsy-119408	Tarsius syrichta	24.57	1.00e-12	68.60
IUUC-Tca-121712	Theobroma cacao	52.41	1.00e-81	295.00
IUUC-Tbe-127301	Tupaia belangeri	24.30	1.00e-09	58.90
IUUC-Ttr-128204	Tursiops truncatus	24.66	1.00e-12	68.60
IUUC-Vpa-130297	Vicugna pacos	24.66	4.00e-13	70.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence