iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-134288

Ensembl Protein ID

ENSXMAP00000000234.1

UniProt Accession

M3ZDE2; M3ZDE2_XIPMA

Genbank Protein ID

ENSXMAP00000000234

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGAJ01028673

Gene Name

LDB1 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000000228.1	ENSXMAT00000000235.1	ENSXMAP00000000234.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	57.76	4.00e-127	451.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xiphophorus maculatus

Protein Sequence
(Fasta)

MSVGGCACPG CSSKSFKLYS PKEPPNGSTF PPFHPGTMLD RDVGPTPMYP PSYMEPGIGR 60
HTPYGNQTDY RIFELNKRLQ NWTEECDNLW WDAFTTEFFE DDAMLTITFC LEDGPKRYTI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NTCTCTCTCT CTCTCTCTCT 60
CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCCTC CCACCTGAGC TGTAATTTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0005634--C:nucleus
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

xma:102226528

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	25.90	8.00e-05	42.70
IUUC-Aml-002031	Ailuropoda melanoleuca	92.75	0.00e+00	728.00
IUUC-Atr-003083	Amborella trichopoda	23.19	9.00e-04	39.70
IUUC-Apl-004210	Anas platyrhynchos	93.31	1.00e-172	598.00
IUUC-Aca-005241	Anolis carolinensis	94.66	0.00e+00	749.00
IUUC-Aly-006204	Arabidopsis lyrata	25.00	3.00e-06	47.40
IUUC-Ath-007339	Arabidopsis thaliana	25.00	3.00e-06	47.80
IUUC-Acl-008255	Aspergillus clavatus	20.18	7.00e-06	46.20
IUUC-Ame-010910	Astyanax mexicanus	95.87	0.00e+00	752.00
IUUC-Bgr-012180	Blumeria graminis	21.83	1.00e-06	48.90
IUUC-Bta-012596	Bos taurus	72.83	2.00e-150	525.00
IUUC-Bci-013927	Botrytis cinerea	26.03	1.00e-06	48.50
IUUC-Bol-015721	Brassica oleracea	25.53	1.00e-06	48.50
IUUC-Bra-017183	Brassica rapa	25.53	1.00e-06	48.50
IUUC-Cel-018189	Caenorhabditis elegans	33.62	5.00e-30	125.00
IUUC-Cja-019586	Callithrix jacchus	74.58	4.00e-156	543.00
IUUC-Cfa-021188	Canis familiaris	92.75	0.00e+00	727.00
IUUC-Cpo-022350	Cavia porcellus	93.55	0.00e+00	722.00
IUUC-Csa-023816	Chlorocebus sabaeus	93.69	0.00e+00	741.00
IUUC-Cho-024958	Choloepus hoffmanni	61.26	3.00e-64	238.00
IUUC-Cin-025721	Ciona intestinalis	50.94	3.00e-86	311.00
IUUC-Csv-026065	Ciona savignyi	53.67	4.00e-90	324.00
IUUC-Dre-027356	Danio rerio	68.98	6.00e-148	516.00
IUUC-Dno-029918	Dasypus novemcinctus	93.77	0.00e+00	709.00
IUUC-Dor-030634	Dipodomys ordii	93.87	0.00e+00	673.00
IUUC-Dse-031245	Dothistroma septosporum	23.68	3.00e-04	40.80
IUUC-Dme-031667	Drosophila melanogaster	63.66	1.00e-121	429.00
IUUC-Ete-032246	Echinops telfairi	71.71	6.00e-152	530.00
IUUC-Eca-034015	Equus caballus	73.74	5.00e-156	543.00
IUUC-Eeu-034902	Erinaceus europaeus	93.87	0.00e+00	673.00
IUUC-Fca-035903	Felis catus	93.33	0.00e+00	723.00
IUUC-Fal-037407	Ficedula albicollis	76.19	4.00e-151	527.00
IUUC-Gmo-039466	Gadus morhua	93.27	0.00e+00	763.00
IUUC-Ggr-040030	Gaeumannomyces graminis	22.98	2.00e-03	37.70
IUUC-Gga-040214	Gallus gallus	94.17	0.00e+00	740.00
IUUC-Gac-042214	Gasterosteus aculeatus	95.57	0.00e+00	770.00
IUUC-Gma-042794	Glycine max	24.53	4.00e-07	50.40
IUUC-Ggo-044988	Gorilla gorilla	74.02	2.00e-156	544.00
IUUC-Hsa-046092	Homo sapiens	73.46	1.00e-153	535.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	93.69	0.00e+00	741.00
IUUC-Lch-049895	Latimeria chalumnae	79.44	7.00e-99	353.00
IUUC-Lpe-050806	Leersia perrieri	25.35	3.00e-06	47.80
IUUC-Loc-052845	Lepisosteus oculatus	95.15	0.00e+00	758.00
IUUC-Lma-053090	Leptosphaeria maculans	24.22	3.00e-04	40.80
IUUC-Laf-054538	Loxodonta africana	93.52	3.00e-180	624.00
IUUC-Mcc-055116	Macaca mulatta	81.12	2.00e-118	418.00
IUUC-Meu-056777	Macropus eugenii	88.53	2.00e-179	621.00
IUUC-Mpo-057376	Magnaporthe poae	22.68	5.00e-04	40.00
IUUC-Mtr-058142	Medicago truncatula	24.53	5.00e-07	50.10
IUUC-Mga-059716	Meleagris gallopavo	75.63	3.00e-150	524.00
IUUC-Mmr-060649	Microcebus murinus	73.46	8.00e-155	539.00
IUUC-Mdo-062535	Monodelphis domestica	74.02	7.00e-155	540.00
IUUC-Mmu-064036	Mus musculus	72.63	1.00e-152	532.00
IUUC-Mac-065338	Musa acuminata	23.67	1.00e-05	45.40
IUUC-Mpu-065719	Mustela putorius furo	93.69	0.00e+00	741.00
IUUC-Mlu-067219	Myotis lucifugus	92.12	0.00e+00	712.00
IUUC-Ncr-068691	Neurospora crassa	22.73	3.00e-05	44.30
IUUC-Nle-068983	Nomascus leucogenys	73.61	9.00e-157	546.00
IUUC-Opr-070467	Ochotona princeps	93.87	0.00e+00	673.00
IUUC-Ont-071566	Oreochromis niloticus	98.03	0.00e+00	778.00
IUUC-Oan-073368	Ornithorhynchus anatinus	93.60	0.00e+00	670.00
IUUC-Ocu-074854	Oryctolagus cuniculus	74.30	2.00e-157	548.00
IUUC-Ome-081687	Oryza meridionalis	26.32	1.00e-03	38.50
IUUC-Ola-086364	Oryzias latipes	97.54	0.00e+00	773.00
IUUC-Oga-088235	Otolemur garnettii	75.70	1.00e-153	535.00
IUUC-Oar-089547	Ovis aries	92.75	0.00e+00	728.00
IUUC-Ptr-091423	Pan troglodytes	74.02	3.00e-156	544.00
IUUC-Pan-092378	Papio anubis	93.87	0.00e+00	673.00
IUUC-Psi-093638	Pelodiscus sinensis	74.02	3.00e-152	530.00
IUUC-Pma-094384	Petromyzon marinus	64.04	2.00e-46	178.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.66	6.00e-04	39.70
IUUC-Pfo-096031	Poecilia formosa	96.53	0.00e+00	719.00
IUUC-Pab-097886	Pongo abelii	73.61	9.00e-157	546.00
IUUC-Pop-099430	Populus trichocarpa	24.85	2.00e-06	48.10
IUUC-Pca-101138	Procavia capensis	93.87	0.00e+00	673.00
IUUC-Ppe-101293	Prunus persica	29.67	1.00e-06	48.50
IUUC-Pva-103215	Pteropus vampyrus	73.74	4.00e-156	544.00
IUUC-Pte-104238	Pyrenophora teres	24.41	1.00e-03	37.70
IUUC-Rno-105968	Rattus norvegicus	72.91	7.00e-153	533.00
IUUC-Sha-107595	Sarcophilus harrisii	93.20	0.00e+00	706.00
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.14	2.00e-06	47.40
IUUC-Smo-109552	Selaginella moellendorffii	19.34	2.00e-03	38.10
IUUC-Sly-110873	Solanum lycopersicum	25.47	3.00e-06	47.80
IUUC-Stu-112586	Solanum tuberosum	20.30	8.00e-03	35.80
IUUC-Sar-113076	Sorex araneus	73.39	1.00e-102	366.00
IUUC-Sre-115143	Sporisorium reilianum	18.93	8.00e-04	39.30
IUUC-Ssc-115755	Sus scrofa	93.33	0.00e+00	664.00
IUUC-Tgu-117326	Taeniopygia guttata	75.91	2.00e-150	525.00
IUUC-Tru-117858	Takifugu rubripes	70.24	2.00e-153	535.00
IUUC-Tsy-119296	Tarsius syrichta	67.32	6.00e-137	480.00
IUUC-Tni-119822	Tetraodon nigroviridis	93.79	0.00e+00	650.00
IUUC-Tca-120935	Theobroma cacao	24.53	6.00e-07	50.10
IUUC-Tbe-127366	Tupaia belangeri	92.27	0.00e+00	649.00
IUUC-Ttr-128484	Tursiops truncatus	74.47	2.00e-144	505.00
IUUC-Vpa-130304	Vicugna pacos	80.69	1.00e-117	415.00
IUUC-Vvi-131560	Vitis vinifera	28.57	2.00e-06	47.80
IUUC-Xtr-132062	Xenopus tropicalis	94.93	0.00e+00	676.00
IUUC-Yli-134374	Yarrowia lipolytica	19.47	1.00e-05	45.10
IUUC-Zma-135310	Zea mays	23.16	2.00e-04	41.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence