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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007120
Ensembl Protein ID AT2G45000.1
UniProt Accession Q8L7F7; Q9SHD8; NUP62_ARATH
Genbank Protein ID AEC10495.1; AAM91808.1; AAL69462.1; AAL86303.1
Protein Name Nuclear pore complex protein NUP62; Nucleoporin 62; Protein EMBRYO DEFECTIVE 2766
Genbank Nucleotide ID CP002685; AY133874; AY074646; AY080620
Gene Name NUP62; EMB2766; At2g45000; T14P1.20
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G45000 AT2G45000.1 AT2G45000.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndexPINAHINTMentha
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/Other 19.29 2.00e-06 49.70 IUUC-Sce-106131
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MSGFPFGQSN SVGGFSFGSS SATNSSSASS TTSPLSFSFN QSSNPSSTGF GFGSSVSSTP 60
ASSTTPSFGF GASSTPSFGF GSSASSSTPS FGFGSSASVT PASTTPSFGF GTAASSSAPA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007120|E3,E3 activity/Other|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACCATACGCT CGGACTCACC ACAAAGCCTC TCCGTACGAA AGAGGTTTCT GCAAAACCCC 60
TTATTTCTCA AACGCCGGCG AAGAAGAACG AACCAGTGAA GAGAAGAGAA GAGAAGAGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007120|E3,E3 activity/Other|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0509--mRNA transport
KW-0906--Nuclear pore complex
KW-0539--Nucleus
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0811--Translocation
KW-0813--Transport
Interpro

IPR026010--NSP1/NUP62
IPR007758--Nucleoporin_NSP1_C
Pfam

PF05064--Nsp1_C
Gene Ontology

GO:0005829--C:cytosol
GO:0005635--C:nuclear envelope
GO:0034399--C:nuclear periphery
GO:0044613--C:nuclear pore central transport channel
GO:0005487--F:nucleocytoplasmic transporter activity
GO:0005543--F:phospholipid binding
GO:0017056--F:structural constituent of nuclear pore
GO:0051028--P:mRNA transport
GO:0010930--P:negative regulation of auxin mediated signaling pathway
GO:0006606--P:protein import into nucleus
GO:0071426--P:ribonucleoprotein complex export from nucleus
GO:0006405--P:RNA export from nucleus
KEGG ath:AT2G45000
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000103 Aegilops tauschii 65.92 6.00e-87 313.00
IUUC-Aml-002215 Ailuropoda melanoleuca 24.87 3.00e-17 82.40
IUUC-Atr-002951 Amborella trichopoda 74.63 5.00e-90 325.00
IUUC-Apl-003795 Anas platyrhynchos 25.68 3.00e-21 95.90
IUUC-Aca-004808 Anolis carolinensis 25.53 4.00e-20 92.00
IUUC-Aly-005471 Arabidopsis lyrata 97.49 2.00e-142 498.00
IUUC-Ago-007770 Ashbya gossypii 20.45 2.00e-08 53.50
IUUC-Acl-008342 Aspergillus clavatus 29.03 1.00e-21 97.40
IUUC-Afl-008407 Aspergillus flavus 28.34 9.00e-20 91.30
IUUC-Ani-009240 Aspergillus nidulans 29.41 5.00e-21 95.50
IUUC-Ang-009754 Aspergillus niger 27.60 3.00e-21 96.30
IUUC-Aor-010138 Aspergillus oryzae 28.34 1.00e-20 94.40
IUUC-Ate-010408 Aspergillus terreus 28.88 2.00e-21 97.10
IUUC-Ame-011356 Astyanax mexicanus 24.64 6.00e-23 101.00
IUUC-Bgr-012171 Blumeria graminis 28.04 7.00e-25 107.00
IUUC-Bta-013123 Bos taurus 24.77 2.70e-01 32.00
IUUC-Bci-013631 Botrytis cinerea 26.84 1.00e-22 101.00
IUUC-Bdi-014451 Brachypodium distachyon 67.27 1.00e-87 315.00
IUUC-Bol-015251 Brassica oleracea 96.63 5.00e-118 417.00
IUUC-Bra-017238 Brassica rapa 96.63 9.00e-118 417.00
IUUC-Cja-019404 Callithrix jacchus 24.62 5.00e-19 88.60
IUUC-Cfa-020656 Canis familiaris 24.87 2.00e-17 82.80
IUUC-Cpo-021577 Cavia porcellus 24.87 1.00e-16 80.50
IUUC-Csa-023298 Chlorocebus sabaeus 24.35 9.00e-17 80.90
IUUC-Cgl-026616 Colletotrichum gloeosporioides 24.02 2.00e-17 81.30
IUUC-Cne-026912 Cryptococcus neoformans 24.17 2.00e-18 87.00
IUUC-Dre-027936 Danio rerio 24.02 3.00e-18 85.90
IUUC-Dno-029425 Dasypus novemcinctus 23.83 2.00e-14 73.60
IUUC-Dor-030759 Dipodomys ordii 25.32 7.00e-10 57.80
IUUC-Dse-031327 Dothistroma septosporum 20.31 9.00e-11 61.60
IUUC-Eca-034163 Equus caballus 25.60 2.00e-19 87.80
IUUC-Fca-035933 Felis catus 24.87 3.00e-18 86.30
IUUC-Fal-036641 Ficedula albicollis 25.81 1.00e-20 94.40
IUUC-Fox-038065 Fusarium oxysporum 24.29 7.00e-21 95.10
IUUC-Fso-038180 Fusarium solani 24.51 3.00e-22 99.80
IUUC-Gmo-038896 Gadus morhua 25.14 5.00e-15 75.10
IUUC-Ggr-040080 Gaeumannomyces graminis 26.00 2.00e-22 100.00
IUUC-Gga-041135 Gallus gallus 25.14 5.00e-21 95.10
IUUC-Gac-041923 Gasterosteus aculeatus 26.20 5.00e-24 105.00
IUUC-Gma-043083 Glycine max 84.13 4.00e-102 365.00
IUUC-Ggo-044765 Gorilla gorilla 24.35 2.00e-17 83.20
IUUC-Hsa-046692 Homo sapiens 24.35 1.00e-17 84.00
IUUC-Itr-048010 Ictidomys tridecemlineatus 24.87 1.00e-18 87.40
IUUC-Kpa-049305 Komagataella pastoris 22.22 2.00e-15 77.00
IUUC-Lch-050204 Latimeria chalumnae 27.78 6.00e-20 91.70
IUUC-Lpe-050941 Leersia perrieri 50.72 3.00e-53 200.00
IUUC-Loc-051832 Lepisosteus oculatus 26.26 1.00e-21 97.40
IUUC-Laf-054586 Loxodonta africana 26.94 4.00e-22 98.60
IUUC-Mcc-054910 Macaca mulatta 24.35 1.00e-16 80.90
IUUC-Meu-056117 Macropus eugenii 25.71 4.00e-15 73.20
IUUC-Mor-057022 Magnaporthe oryzae 28.28 7.00e-25 108.00
IUUC-Mpo-057380 Magnaporthe poae 26.84 5.00e-22 99.00
IUUC-Mtr-057916 Medicago truncatula 86.96 7.00e-106 375.00
IUUC-Mga-059208 Meleagris gallopavo 25.27 2.00e-19 89.70
IUUC-Mvi-060361 Microbotryum violaceum 30.23 5.00e-09 55.80
IUUC-Mmr-061579 Microcebus murinus 24.87 4.00e-19 88.60
IUUC-Mdo-062211 Monodelphis domestica 25.00 1.00e-19 90.90
IUUC-Mmu-063320 Mus musculus 24.87 2.00e-17 83.60
IUUC-Mac-065316 Musa acuminata 68.14 3.00e-85 308.00
IUUC-Mpu-066778 Mustela putorius furo 24.35 3.00e-17 82.40
IUUC-Mlu-067961 Myotis lucifugus 24.87 8.00e-18 84.30
IUUC-Nfi-068470 Neosartorya fischeri 28.35 1.00e-22 100.00
IUUC-Ncr-068853 Neurospora crassa 25.68 1.00e-21 97.80
IUUC-Nle-069776 Nomascus leucogenys 32.11 4.00e-10 57.00
IUUC-Ont-071804 Oreochromis niloticus 25.67 1.00e-22 100.00
IUUC-Oan-073171 Ornithorhynchus anatinus 25.14 8.00e-20 91.30
IUUC-Ocu-074502 Oryctolagus cuniculus 24.38 6.00e-12 63.90
IUUC-Oba-075227 Oryza barthii 58.74 8.00e-72 262.00
IUUC-Obr-076100 Oryza brachyantha 67.27 5.00e-88 318.00
IUUC-Ogl-077722 Oryza glaberrima 67.71 7.00e-89 319.00
IUUC-Ogu-078656 Oryza glumaepatula 67.29 9.00e-84 301.00
IUUC-Oin-079356 Oryza indica 62.14 6.00e-85 306.00
IUUC-Olo-080776 Oryza longistaminata 63.40 1.00e-84 305.00
IUUC-Ome-081497 Oryza meridionalis 68.18 1.00e-88 318.00
IUUC-Oni-082204 Oryza nivara 67.56 2.00e-89 320.00
IUUC-Opu-083759 Oryza punctata 74.62 4.00e-53 199.00
IUUC-Ola-086898 Oryzias latipes 26.42 2.00e-22 100.00
IUUC-Oga-088255 Otolemur garnettii 24.87 1.00e-16 80.10
IUUC-Oar-089798 Ovis aries 23.83 3.00e-13 68.90
IUUC-Ptr-091608 Pan troglodytes 24.35 3.00e-17 82.80
IUUC-Pan-092757 Papio anubis 24.47 2.00e-16 80.10
IUUC-Psi-093357 Pelodiscus sinensis 25.68 5.00e-22 98.60
IUUC-Pma-094710 Petromyzon marinus 25.41 2.00e-16 80.10
IUUC-Pno-094791 Phaeosphaeria nodorum 27.18 2.00e-20 93.60
IUUC-Ppa-095481 Physcomitrella patens 68.66 1.00e-70 260.00
IUUC-Pfo-097470 Poecilia formosa 26.26 7.00e-19 88.20
IUUC-Pab-098408 Pongo abelii 24.35 2.00e-17 82.80
IUUC-Pop-100081 Populus trichocarpa 85.78 3.00e-103 366.00
IUUC-Pca-100349 Procavia capensis 25.91 2.00e-22 100.00
IUUC-Ppe-101825 Prunus persica 86.12 1.00e-108 386.00
IUUC-Pgr-103532 Puccinia graminis 29.56 3.00e-24 106.00
IUUC-Pte-104213 Pyrenophora teres 29.39 6.00e-22 98.60
IUUC-Pyt-104505 Pyrenophora triticirepentis 26.46 2.00e-18 87.00
IUUC-Rno-104985 Rattus norvegicus 26.13 1.00e-18 87.00
IUUC-Sce-106131 Saccharomyces cerevisiae 21.08 1.00e-10 61.20
IUUC-Sha-107579 Sarcophilus harrisii 25.00 5.00e-13 67.40
IUUC-Sja-107816 Schizosaccharomyces japonicus 25.00 2.00e-19 90.10
IUUC-Spo-108243 Schizosaccharomyces pombe 24.61 4.00e-18 85.50
IUUC-Sit-110530 Setaria italica 69.71 4.00e-89 322.00
IUUC-Sly-111305 Solanum lycopersicum 81.25 5.00e-99 354.00
IUUC-Sbi-114353 Sorghum bicolor 69.86 4.00e-87 314.00
IUUC-Sre-115119 Sporisorium reilianum 26.63 3.00e-15 75.90
IUUC-Ssc-116032 Sus scrofa 24.87 9.00e-17 81.30
IUUC-Tgu-117392 Taeniopygia guttata 24.73 8.00e-14 70.90
IUUC-Tru-118364 Takifugu rubripes 26.09 1.00e-20 94.00
IUUC-Tsy-119443 Tarsius syrichta 26.04 2.00e-12 66.60
IUUC-Tni-120115 Tetraodon nigroviridis 26.09 2.00e-20 92.80
IUUC-Tca-120955 Theobroma cacao 87.02 4.00e-109 388.00
IUUC-Tre-122173 Trichoderma reesei 25.13 1.00e-20 94.40
IUUC-Tvi-122527 Trichoderma virens 22.78 2.00e-17 81.30
IUUC-Tae-123047 Triticum aestivum 69.57 3.00e-87 315.00
IUUC-Tme-127155 Tuber melanosporum 26.26 2.00e-21 97.10
IUUC-Tbe-127667 Tupaia belangeri 26.86 2.00e-13 68.90
IUUC-Ttr-128589 Tursiops truncatus 25.23 8.00e-19 87.80
IUUC-Vda-129888 Verticillium dahliae 24.58 1.00e-16 80.90
IUUC-Vpa-130367 Vicugna pacos 25.23 1.00e-13 69.70
IUUC-Vvi-131500 Vitis vinifera 79.37 2.00e-103 369.00
IUUC-Xtr-132497 Xenopus tropicalis 24.35 4.00e-22 99.00
IUUC-Xma-133341 Xiphophorus maculatus 26.26 5.00e-21 95.10
IUUC-Yli-134543 Yarrowia lipolytica 31.16 6.00e-24 104.00
IUUC-Zma-135505 Zea mays 69.57 7.00e-88 317.00
Created Date 25-Jun-2017

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