iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID	HINT
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	96.58	0.00e+00	901.00	IUUC-Hsa-046110

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MASVQASRRQ WCYLCDLPKM PWAMVWDFSE AVCRGCVNFE GADRIELLID AARQLKRSHV 60
LPEGRSPGPP ALKHPTSKDL ASTGSQGSQL PPPQAQAQPS GTGGSVSGPD RYDRATSSSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGAGGAG GCGACGGCGG CCGTTGCAGC GGCGTCGGCG GCGGCGCGAG CGAAGCGGCG 60
GGAGCCTGGG GCGGCGGCGC CCGAGGCCCA TTCAGGAGCT GGAGCTGTGC ATCTCGGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR022750--Interferon_reg_fac2-bd1_2_Znf
IPR018957--Znf_C3HC4_RING-type
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF11261--IRF-2BP1_2
PF00097--zf-C3HC4

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0046872--F:metal ion binding

KEGG

rno:308404

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000186	Aegilops tauschii	35.59	9.00e-03	32.30
IUUC-Aca-004493	Anolis carolinensis	59.01	0.00e+00	634.00
IUUC-Ame-011922	Astyanax mexicanus	49.46	3.00e-152	531.00
IUUC-Bta-012691	Bos taurus	92.93	0.00e+00	847.00
IUUC-Cfa-020153	Canis familiaris	96.06	0.00e+00	944.00
IUUC-Cpo-021918	Cavia porcellus	94.97	0.00e+00	932.00
IUUC-Csa-023365	Chlorocebus sabaeus	96.06	0.00e+00	945.00
IUUC-Dre-027787	Danio rerio	49.21	4.00e-147	514.00
IUUC-Dno-029864	Dasypus novemcinctus	94.87	0.00e+00	986.00
IUUC-Dor-030217	Dipodomys ordii	96.08	0.00e+00	729.00
IUUC-Eca-033451	Equus caballus	95.62	0.00e+00	928.00
IUUC-Fca-035677	Felis catus	95.72	0.00e+00	955.00
IUUC-Gmo-039514	Gadus morhua	41.96	3.00e-83	302.00
IUUC-Ggo-045243	Gorilla gorilla	96.40	0.00e+00	945.00
IUUC-Hsa-046110	Homo sapiens	96.58	0.00e+00	947.00
IUUC-Itr-048330	Ictidomys tridecemlineatus	97.09	0.00e+00	946.00
IUUC-Lch-049976	Latimeria chalumnae	53.60	5.00e-170	590.00
IUUC-Mcc-055423	Macaca mulatta	95.89	0.00e+00	944.00
IUUC-Meu-056349	Macropus eugenii	73.45	2.00e-161	561.00
IUUC-Mmr-061735	Microcebus murinus	96.23	0.00e+00	944.00
IUUC-Mdo-062840	Monodelphis domestica	71.01	8.00e-136	477.00
IUUC-Mmu-063429	Mus musculus	99.66	0.00e+00	933.00
IUUC-Mpu-066580	Mustela putorius furo	95.72	0.00e+00	944.00
IUUC-Nle-069106	Nomascus leucogenys	96.23	0.00e+00	954.00
IUUC-Ont-071903	Oreochromis niloticus	43.42	1.00e-85	310.00
IUUC-Ocu-074681	Oryctolagus cuniculus	76.00	9.00e-180	623.00
IUUC-Obr-076824	Oryza brachyantha	24.20	1.20e-01	30.80
IUUC-Oga-088405	Otolemur garnettii	94.69	0.00e+00	970.00
IUUC-Oar-089381	Ovis aries	92.48	0.00e+00	702.00
IUUC-Ptr-091612	Pan troglodytes	96.58	0.00e+00	947.00
IUUC-Pan-091919	Papio anubis	96.06	0.00e+00	950.00
IUUC-Pfo-096484	Poecilia formosa	48.76	7.00e-123	434.00
IUUC-Pab-098642	Pongo abelii	96.40	0.00e+00	948.00
IUUC-Ppe-101159	Prunus persica	29.63	2.60e-02	33.10
IUUC-Pva-102937	Pteropus vampyrus	95.38	0.00e+00	979.00
IUUC-Sly-111785	Solanum lycopersicum	31.88	1.60e-02	32.70
IUUC-Ssc-115265	Sus scrofa	95.55	0.00e+00	952.00
IUUC-Tru-117754	Takifugu rubripes	41.59	2.00e-107	382.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence