iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Laf-054477

UUCD1 version

UUC-LoA-00677

Ensembl Protein ID

ENSLAFP00000017209.2

UniProt Accession

G3TPB5; G3TPB5_LOXAF

Protein Name

Uncharacterized protein

Gene Name

RNF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000023196.2	ENSLAFT00000023025.2	ENSLAFP00000017209.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.30e-09	36.8	240	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 240  CAICLDEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 282
           ********66666******************.....899********7 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MLLSIGMLML SATQVYTILT VQLFAFLNLL PVEADILAVS TENASQTFDD LPARFGYRLP 60
AEGLKGFLIN SKPENACEPI VPPPLKDNSS GTFIVLIRRL DCNFDVKVLN AQRAGFKAAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCTCT CTATAGGAAT GCTGATGCTG TCGGCCACGC AGGTCTATAC CATCCTGACT 60
GTCCAGCTCT TTGCGTTCTT GAATCTGCTG CCCGTTGAAG CGGACATTTT AGCAGTAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000889	Aegilops tauschii	27.99	2.00e-18	87.00
IUUC-Aml-001909	Ailuropoda melanoleuca	95.01	0.00e+00	628.00
IUUC-Atr-003055	Amborella trichopoda	31.80	5.00e-32	131.00
IUUC-Apl-004022	Anas platyrhynchos	88.98	1.00e-168	585.00
IUUC-Aca-004641	Anolis carolinensis	85.68	5.00e-164	570.00
IUUC-Aly-006519	Arabidopsis lyrata	31.95	7.00e-33	134.00
IUUC-Ani-009337	Aspergillus nidulans	46.30	4.00e-13	67.80
IUUC-Ame-010635	Astyanax mexicanus	72.65	5.00e-141	493.00
IUUC-Bta-012593	Bos taurus	94.75	0.00e+00	669.00
IUUC-Bci-013936	Botrytis cinerea	35.14	7.00e-13	68.60
IUUC-Bdi-014479	Brachypodium distachyon	32.41	4.00e-28	118.00
IUUC-Bol-015396	Brassica oleracea	32.67	4.00e-23	101.00
IUUC-Bra-017689	Brassica rapa	33.33	1.00e-33	137.00
IUUC-Cel-018181	Caenorhabditis elegans	31.72	1.00e-28	120.00
IUUC-Cja-019353	Callithrix jacchus	94.23	5.00e-180	623.00
IUUC-Cfa-020234	Canis familiaris	94.75	0.00e+00	627.00
IUUC-Cpo-021602	Cavia porcellus	92.06	2.00e-152	531.00
IUUC-Cre-022983	Chlamydomonas reinhardtii	37.93	1.00e-10	60.80
IUUC-Csa-023201	Chlorocebus sabaeus	94.75	0.00e+00	626.00
IUUC-Cho-024954	Choloepus hoffmanni	80.05	4.00e-146	510.00
IUUC-Cin-025554	Ciona intestinalis	41.78	5.00e-60	224.00
IUUC-Dre-028744	Danio rerio	76.62	7.00e-135	473.00
IUUC-Dno-029675	Dasypus novemcinctus	94.49	9.00e-180	622.00
IUUC-Dor-030791	Dipodomys ordii	76.90	3.00e-132	464.00
IUUC-Dse-031406	Dothistroma septosporum	43.33	2.00e-12	68.20
IUUC-Dme-031765	Drosophila melanogaster	41.34	5.00e-51	195.00
IUUC-Ete-032577	Echinops telfairi	87.11	6.00e-141	493.00
IUUC-Eca-034148	Equus caballus	94.49	2.00e-180	624.00
IUUC-Eeu-034552	Erinaceus europaeus	92.65	2.00e-173	601.00
IUUC-Fca-036021	Felis catus	95.54	0.00e+00	626.00
IUUC-Fal-037621	Ficedula albicollis	90.03	8.00e-169	586.00
IUUC-Fox-038011	Fusarium oxysporum	34.41	9.00e-14	71.60
IUUC-Gmo-039485	Gadus morhua	77.44	1.00e-132	466.00
IUUC-Ggr-039824	Gaeumannomyces graminis	50.00	3.00e-12	67.40
IUUC-Gga-041166	Gallus gallus	88.71	4.00e-169	587.00
IUUC-Gac-042124	Gasterosteus aculeatus	75.62	2.00e-127	448.00
IUUC-Ggo-045344	Gorilla gorilla	95.01	0.00e+00	628.00
IUUC-Hsa-045960	Homo sapiens	95.01	0.00e+00	628.00
IUUC-Hvu-047136	Hordeum vulgare	33.99	2.00e-28	120.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	93.18	4.00e-179	620.00
IUUC-Lch-050635	Latimeria chalumnae	82.19	2.00e-134	471.00
IUUC-Lpe-051192	Leersia perrieri	33.45	7.00e-30	125.00
IUUC-Loc-052869	Lepisosteus oculatus	77.98	7.00e-139	486.00
IUUC-Mcc-055232	Macaca mulatta	94.75	0.00e+00	626.00
IUUC-Meu-056237	Macropus eugenii	82.90	4.00e-115	407.00
IUUC-Mpo-057522	Magnaporthe poae	44.44	3.00e-13	69.70
IUUC-Mtr-058129	Medicago truncatula	31.91	1.00e-27	117.00
IUUC-Mla-059171	Melampsora laricipopulina	38.57	1.00e-10	61.20
IUUC-Mga-059780	Meleagris gallopavo	89.24	3.00e-169	587.00
IUUC-Mvi-060468	Microbotryum violaceum	46.00	4.00e-12	67.00
IUUC-Mmr-061384	Microcebus murinus	95.14	3.00e-175	607.00
IUUC-Mdo-062781	Monodelphis domestica	91.36	8.00e-176	609.00
IUUC-Mmu-063727	Mus musculus	90.81	6.00e-168	583.00
IUUC-Mpu-066497	Mustela putorius furo	95.54	0.00e+00	628.00
IUUC-Mlu-067654	Myotis lucifugus	94.42	4.00e-113	400.00
IUUC-Ncr-068802	Neurospora crassa	54.00	3.00e-13	70.90
IUUC-Nle-069368	Nomascus leucogenys	95.01	0.00e+00	628.00
IUUC-Opr-070934	Ochotona princeps	67.19	8.00e-110	390.00
IUUC-Ont-071868	Oreochromis niloticus	75.55	1.00e-127	449.00
IUUC-Oan-072733	Ornithorhynchus anatinus	86.48	4.00e-103	367.00
IUUC-Ocu-074083	Oryctolagus cuniculus	94.23	8.00e-180	622.00
IUUC-Oba-075841	Oryza barthii	33.33	4.00e-28	119.00
IUUC-Obr-076703	Oryza brachyantha	34.26	9.00e-31	127.00
IUUC-Ogl-077861	Oryza glaberrima	34.28	6.00e-31	128.00
IUUC-Ogu-078205	Oryza glumaepatula	34.73	6.00e-29	122.00
IUUC-Oin-080138	Oryza indica	33.00	2.00e-28	120.00
IUUC-Olo-081024	Oryza longistaminata	35.11	6.00e-30	126.00
IUUC-Ome-081844	Oryza meridionalis	35.50	7.00e-31	128.00
IUUC-Oni-082382	Oryza nivara	32.82	1.00e-30	127.00
IUUC-Opu-083162	Oryza punctata	34.35	5.00e-31	129.00
IUUC-Oru-085122	Oryza rufipogon	33.55	1.00e-28	120.00
IUUC-Osa-086175	Oryza sativa	34.28	5.00e-31	129.00
IUUC-Ola-086440	Oryzias latipes	74.67	1.00e-114	406.00
IUUC-Oga-088291	Otolemur garnettii	90.30	2.00e-163	568.00
IUUC-Oar-089911	Ovis aries	95.01	0.00e+00	670.00
IUUC-Ptr-091166	Pan troglodytes	95.01	0.00e+00	628.00
IUUC-Pan-092154	Papio anubis	94.75	0.00e+00	626.00
IUUC-Psi-093062	Pelodiscus sinensis	89.50	2.00e-164	571.00
IUUC-Pma-094545	Petromyzon marinus	73.21	7.00e-26	107.00
IUUC-Ppa-095928	Physcomitrella patens	34.85	6.00e-32	131.00
IUUC-Pfo-097232	Poecilia formosa	77.12	1.00e-130	459.00
IUUC-Pab-097909	Pongo abelii	94.75	0.00e+00	629.00
IUUC-Pop-099688	Populus trichocarpa	32.08	2.00e-23	103.00
IUUC-Pca-100724	Procavia capensis	78.32	5.00e-134	470.00
IUUC-Ppe-101605	Prunus persica	31.41	2.00e-28	119.00
IUUC-Pva-102624	Pteropus vampyrus	89.24	9.00e-161	559.00
IUUC-Pgr-103420	Puccinia graminis	55.32	2.00e-12	68.20
IUUC-Ptt-103943	Puccinia triticina	44.44	8.00e-11	61.60
IUUC-Pte-104044	Pyrenophora teres	47.27	2.00e-13	70.50
IUUC-Rno-105109	Rattus norvegicus	89.24	5.00e-162	563.00
IUUC-Sha-107563	Sarcophilus harrisii	89.01	4.00e-171	593.00
IUUC-Spo-108083	Schizosaccharomyces pombe	26.96	5.00e-15	75.10
IUUC-Ssl-108601	Sclerotinia sclerotiorum	41.07	7.00e-13	68.60
IUUC-Smo-109274	Selaginella moellendorffii	35.74	2.00e-33	135.00
IUUC-Sit-110628	Setaria italica	33.77	7.00e-32	131.00
IUUC-Sly-110842	Solanum lycopersicum	29.01	9.00e-28	117.00
IUUC-Sre-114989	Sporisorium reilianum	43.14	1.00e-12	68.90
IUUC-Ssc-116043	Sus scrofa	95.54	0.00e+00	626.00
IUUC-Tgu-116908	Taeniopygia guttata	89.01	3.00e-168	583.00
IUUC-Tru-118219	Takifugu rubripes	75.79	1.00e-130	459.00
IUUC-Tsy-119333	Tarsius syrichta	95.54	9.00e-180	622.00
IUUC-Tni-120332	Tetraodon nigroviridis	71.49	1.00e-88	319.00
IUUC-Tae-125320	Triticum aestivum	31.52	7.00e-30	124.00
IUUC-Tur-126455	Triticum urartu	33.46	7.00e-27	115.00
IUUC-Tbe-127859	Tupaia belangeri	84.21	8.00e-163	566.00
IUUC-Ttr-129219	Tursiops truncatus	85.56	2.00e-153	534.00
IUUC-Vda-129899	Verticillium dahliae	43.40	6.00e-13	68.60
IUUC-Vpa-130314	Vicugna pacos	91.60	2.00e-169	587.00
IUUC-Vvi-131355	Vitis vinifera	33.33	5.00e-29	122.00
IUUC-Xtr-132114	Xenopus tropicalis	75.56	1.00e-129	455.00
IUUC-Xma-133474	Xiphophorus maculatus	77.12	8.00e-131	459.00
IUUC-Yli-134442	Yarrowia lipolytica	44.68	3.00e-12	65.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence