iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057967

Ensembl Protein ID

KEH41245

UniProt Accession

A0A072VSZ0; A0A072VSZ0_MEDTR

Genbank Protein ID

KEH41245.1

Protein Name

C3HC4-type RING zinc finger protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g047180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g047180	KEH41245	KEH41245

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-06	30.5	683	724

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle +   d  + lpC H fh+dC+  w        ++ +CP+C+
   Q: 683  CAVCLETPvkGDTIRHLPCLHKFHKDCIDPW------LGRKSSCPVCK 724
           ******9977444999***************......999999****7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAEDMEIDHI IDVPDTPERS NAGNNDRKYV GNPEKRGRAF HVPNEISKCN KYVIISPDKP 60
SPSQNASIFR RAQTEKVSGG LGTSRSSKAE MTEKGKTVSS RIPSKSSHHG HISVFDLTGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTTCGCCG CCCGTACACA CTGTTATGCT GTCGTGTTAT CTTCTTCTTA TTCTTCTCTC 60
CTCATCGCAT ACCCGACCCG ACCCGAATTC TTTCGTCAGA ACGGATCGAT CACATTAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g047180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000237	Aegilops tauschii	67.12	6.00e-26	112.00
IUUC-Atr-002738	Amborella trichopoda	56.49	8.00e-42	165.00
IUUC-Aly-006291	Arabidopsis lyrata	45.66	3.00e-41	162.00
IUUC-Ath-007110	Arabidopsis thaliana	67.19	4.00e-42	165.00
IUUC-Ame-011435	Astyanax mexicanus	56.25	5.00e-15	74.70
IUUC-Bdi-014548	Brachypodium distachyon	65.75	2.00e-25	110.00
IUUC-Bol-015541	Brassica oleracea	44.91	5.00e-47	181.00
IUUC-Bra-017050	Brassica rapa	44.70	2.00e-44	173.00
IUUC-Cre-022984	Chlamydomonas reinhardtii	37.04	9.00e-20	92.40
IUUC-Cme-027166	Cyanidioschyzon merolae	54.90	3.00e-14	70.90
IUUC-Dre-028405	Danio rerio	56.25	2.00e-14	72.40
IUUC-Ete-032447	Echinops telfairi	41.98	9.00e-14	70.50
IUUC-Fox-037754	Fusarium oxysporum	45.07	8.00e-12	62.80
IUUC-Gma-043115	Glycine max	57.56	0.00e+00	656.00
IUUC-Hvu-047663	Hordeum vulgare	67.12	6.00e-26	112.00
IUUC-Lch-050604	Latimeria chalumnae	54.17	1.00e-13	70.10
IUUC-Lpe-051616	Leersia perrieri	68.49	6.00e-27	115.00
IUUC-Loc-052044	Lepisosteus oculatus	58.33	3.00e-15	75.50
IUUC-Mac-065237	Musa acuminata	42.42	2.00e-44	173.00
IUUC-Ocu-074881	Oryctolagus cuniculus	35.78	7.00e-16	78.20
IUUC-Oba-075723	Oryza barthii	65.75	6.00e-25	108.00
IUUC-Obr-076746	Oryza brachyantha	68.49	5.00e-27	115.00
IUUC-Ogl-076935	Oryza glaberrima	65.75	6.00e-25	108.00
IUUC-Ogu-077982	Oryza glumaepatula	65.75	7.00e-25	108.00
IUUC-Oin-079124	Oryza indica	65.75	5.00e-25	108.00
IUUC-Ome-081694	Oryza meridionalis	65.75	8.00e-25	108.00
IUUC-Oni-082353	Oryza nivara	65.75	6.00e-25	108.00
IUUC-Opu-083242	Oryza punctata	67.12	9.00e-27	114.00
IUUC-Oru-085078	Oryza rufipogon	65.75	6.00e-25	108.00
IUUC-Osa-086131	Oryza sativa	65.75	7.00e-25	108.00
IUUC-Ola-086771	Oryzias latipes	39.51	3.00e-13	68.20
IUUC-Olu-087904	Ostreococcus lucimarinus	41.38	1.00e-13	67.00
IUUC-Ppa-095697	Physcomitrella patens	38.18	3.00e-36	146.00
IUUC-Pfo-096113	Poecilia formosa	58.33	5.00e-14	71.20
IUUC-Pop-099565	Populus trichocarpa	34.88	3.00e-81	295.00
IUUC-Ppe-101581	Prunus persica	38.88	2.00e-116	412.00
IUUC-Pte-104147	Pyrenophora teres	52.27	3.00e-11	62.40
IUUC-Pyt-104748	Pyrenophora triticirepentis	52.27	3.00e-11	62.40
IUUC-Sha-106505	Sarcophilus harrisii	41.98	4.00e-14	71.20
IUUC-Ssl-108451	Sclerotinia sclerotiorum	38.03	6.00e-11	61.60
IUUC-Smo-109212	Selaginella moellendorffii	47.97	6.00e-28	117.00
IUUC-Sit-110544	Setaria italica	35.47	4.00e-29	121.00
IUUC-Sly-110985	Solanum lycopersicum	64.06	1.00e-47	184.00
IUUC-Stu-112544	Solanum tuberosum	36.12	3.00e-61	229.00
IUUC-Ssc-116294	Sus scrofa	41.98	4.00e-14	71.20
IUUC-Tca-121668	Theobroma cacao	37.31	2.00e-92	332.00
IUUC-Tae-124005	Triticum aestivum	67.12	7.00e-26	111.00
IUUC-Tur-126613	Triticum urartu	67.12	9.00e-26	111.00
IUUC-Tme-126907	Tuber melanosporum	47.37	4.00e-10	60.50
IUUC-Vvi-131471	Vitis vinifera	75.78	6.00e-57	212.00
IUUC-Xma-133410	Xiphophorus maculatus	58.33	3.00e-14	72.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence