iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048902

Ensembl Protein ID

ENSSTOP00000022704.1

UniProt Accession

I3NEA7; I3NEA7_ICTTR

Genbank Protein ID

ENSSTOP00000022704

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01030746

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000022046.1	ENSSTOT00000023367.1	ENSSTOP00000022704.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.60e-16	59.9	180	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP  +k++L+++++
   Q: 180  MEKIW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVTIKSHLKSFSM 227
           67899.**********************888...***************976 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MGTQGSPVKS YDYLLKFLLV GDSDVGKGEI LESLQDGAAE SPYAYSNGID YKTTTILLDG 60
RRVKLELWDT SGQGRFCTIF RSYSRGAQGI LLVYDITNRW SFDGIDRWIK EIDEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGCGGGCG GGAGGATGGG CACTCAGGGC AGCCCGGTGA AGAGCTACGA CTATCTGCTC 60
AAGTTCCTGC TGGTGGGCGA CAGCGACGTG GGCAAGGGCG AGATCCTGGA GAGCCTGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	99.26	7.00e-143	499.00
IUUC-Apl-003799	Anas platyrhynchos	90.20	1.00e-129	455.00
IUUC-Aca-005004	Anolis carolinensis	80.81	4.00e-128	450.00
IUUC-Ame-011203	Astyanax mexicanus	93.95	7.00e-153	532.00
IUUC-Bta-013490	Bos taurus	99.29	1.00e-151	528.00
IUUC-Cja-019990	Callithrix jacchus	98.23	5.00e-150	523.00
IUUC-Cfa-020527	Canis familiaris	75.12	9.00e-97	346.00
IUUC-Cpo-022437	Cavia porcellus	99.63	2.00e-143	500.00
IUUC-Csa-024147	Chlorocebus sabaeus	98.93	3.00e-151	527.00
IUUC-Cho-024716	Choloepus hoffmanni	73.05	5.00e-70	255.00
IUUC-Dre-027427	Danio rerio	93.24	9.00e-153	531.00
IUUC-Dno-029998	Dasypus novemcinctus	91.95	3.00e-116	413.00
IUUC-Dor-030584	Dipodomys ordii	90.13	7.00e-109	385.00
IUUC-Dme-031810	Drosophila melanogaster	69.20	3.00e-94	337.00
IUUC-Ete-033080	Echinops telfairi	96.44	3.00e-143	500.00
IUUC-Eca-033423	Equus caballus	99.15	3.00e-126	443.00
IUUC-Eeu-034590	Erinaceus europaeus	89.27	8.00e-112	395.00
IUUC-Fca-035697	Felis catus	99.15	1.00e-121	428.00
IUUC-Fal-037070	Ficedula albicollis	98.58	6.00e-151	526.00
IUUC-Gmo-039605	Gadus morhua	91.81	2.00e-150	524.00
IUUC-Gga-040343	Gallus gallus	98.58	6.00e-151	526.00
IUUC-Gac-041833	Gasterosteus aculeatus	88.46	3.00e-144	503.00
IUUC-Ggo-045131	Gorilla gorilla	91.46	7.00e-134	469.00
IUUC-Hsa-046237	Homo sapiens	98.93	3.00e-151	527.00
IUUC-Lch-050193	Latimeria chalumnae	95.37	7.00e-154	535.00
IUUC-Loc-052243	Lepisosteus oculatus	93.24	9.00e-153	532.00
IUUC-Laf-054435	Loxodonta africana	96.80	2.00e-150	524.00
IUUC-Mcc-055337	Macaca mulatta	98.58	2.00e-150	524.00
IUUC-Meu-056731	Macropus eugenii	97.60	1.00e-80	292.00
IUUC-Mga-059204	Meleagris gallopavo	80.43	4.00e-135	473.00
IUUC-Mmr-061380	Microcebus murinus	99.64	1.00e-150	525.00
IUUC-Mdo-062438	Monodelphis domestica	98.58	7.00e-151	525.00
IUUC-Mmu-064046	Mus musculus	99.64	1.00e-151	528.00
IUUC-Mpu-066029	Mustela putorius furo	94.44	5.00e-123	432.00
IUUC-Mlu-067741	Myotis lucifugus	98.93	4.00e-151	526.00
IUUC-Nle-069240	Nomascus leucogenys	92.88	2.00e-138	484.00
IUUC-Opr-070662	Ochotona princeps	74.38	4.00e-128	450.00
IUUC-Ont-071248	Oreochromis niloticus	93.24	2.00e-152	530.00
IUUC-Oan-073432	Ornithorhynchus anatinus	96.60	3.00e-122	430.00
IUUC-Ocu-074559	Oryctolagus cuniculus	76.87	6.00e-127	446.00
IUUC-Olo-080270	Oryza longistaminata	34.41	4.00e-12	65.50
IUUC-Ola-086486	Oryzias latipes	86.01	7.00e-139	486.00
IUUC-Oga-088293	Otolemur garnettii	99.64	1.00e-151	528.00
IUUC-Oar-089702	Ovis aries	75.11	2.00e-104	370.00
IUUC-Ptr-090720	Pan troglodytes	98.93	3.00e-151	527.00
IUUC-Pan-091732	Papio anubis	98.93	3.00e-151	527.00
IUUC-Psi-093627	Pelodiscus sinensis	97.15	4.00e-143	499.00
IUUC-Pma-094679	Petromyzon marinus	77.12	6.00e-109	386.00
IUUC-Pfo-097105	Poecilia formosa	92.17	1.00e-151	528.00
IUUC-Pab-098054	Pongo abelii	98.93	3.00e-151	527.00
IUUC-Pca-100775	Procavia capensis	96.89	6.00e-90	322.00
IUUC-Pva-102658	Pteropus vampyrus	98.58	1.00e-150	525.00
IUUC-Rno-105303	Rattus norvegicus	99.64	1.00e-151	528.00
IUUC-Sha-106536	Sarcophilus harrisii	98.58	7.00e-151	525.00
IUUC-Sar-113518	Sorex araneus	74.69	4.00e-110	390.00
IUUC-Ssc-115719	Sus scrofa	74.91	3.00e-122	430.00
IUUC-Tgu-116858	Taeniopygia guttata	99.48	9.00e-115	405.00
IUUC-Tru-118264	Takifugu rubripes	76.19	6.00e-139	486.00
IUUC-Tsy-119011	Tarsius syrichta	75.13	9.00e-87	311.00
IUUC-Tni-120350	Tetraodon nigroviridis	92.17	6.00e-151	526.00
IUUC-Ttr-129236	Tursiops truncatus	98.93	2.00e-153	534.00
IUUC-Xtr-132079	Xenopus tropicalis	79.72	1.00e-134	472.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence