iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028730

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

E3 ubiquitin-protein ligase NRDP1

Genbank Nucleotide ID

BX957355

Gene Name

rnf41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000036831.4	ENSDART00000053472.4	ENSDARP00000053471.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.60e-06	27.2	12	69

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnl 59
           v e++lCpI   + ++Pv +p + + +  ++I +w+a+++  cPv+r+ +t   l P  
   Q: 12   VDEDLLCPICSGVLEEPVQAPhCEHAFCNACITQWFAQQQI-CPVDRTVVTLAHLRPVP 69
           56899***********************************9.******99999998864 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MGYDVTRFQG EVDEDLLCPI CSGVLEEPVQ APHCEHAFCN ACITQWFAQQ QICPVDRTVV 60
TLAHLRPVPR IMRNMLSKLQ ISCDNAGFGC TATLRLDQLQ SHLKDCEHNP KRPVTCEEGC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAGGCGCAG CAGCAGATTC AGTCTGACTT CATCCGCTCG GCTCAGGAAG AGAAATCAGC 60
CATCTCTCAG TCAGATCCCT GCAAACACCA CAGCATCCAA ATCCAGATAT CACATTAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR008974--TRAF-like
IPR015036--USP8_interacting
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR013010--Znf_SIAH

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF08941--USP8_interact

SMART

SM00184--RING

Gene Ontology

GO:0016881--F:acid-amino acid ligase activity
GO:0031386--F:protein tag
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002398	Ailuropoda melanoleuca	90.54	2.00e-178	617.00
IUUC-Apl-003568	Anas platyrhynchos	90.57	7.00e-176	609.00
IUUC-Aca-005119	Anolis carolinensis	91.17	2.00e-179	620.00
IUUC-Ame-010708	Astyanax mexicanus	99.69	0.00e+00	662.00
IUUC-Bta-013428	Bos taurus	85.80	3.00e-167	580.00
IUUC-Cja-019844	Callithrix jacchus	90.57	3.00e-177	614.00
IUUC-Cfa-021124	Canis familiaris	90.85	9.00e-179	619.00
IUUC-Cpo-022325	Cavia porcellus	90.54	2.00e-178	617.00
IUUC-Csa-023113	Chlorocebus sabaeus	90.85	9.00e-179	619.00
IUUC-Cho-024991	Choloepus hoffmanni	89.18	2.00e-105	374.00
IUUC-Cne-026870	Cryptococcus neoformans	37.70	1.00e-19	91.70
IUUC-Dno-028908	Dasypus novemcinctus	90.24	3.00e-160	557.00
IUUC-Dor-030411	Dipodomys ordii	90.85	1.00e-178	618.00
IUUC-Dse-031478	Dothistroma septosporum	32.04	1.00e-10	61.60
IUUC-Dme-031868	Drosophila melanogaster	57.46	5.00e-111	394.00
IUUC-Ete-032896	Echinops telfairi	73.21	2.00e-115	408.00
IUUC-Eca-034135	Equus caballus	90.85	9.00e-179	619.00
IUUC-Eeu-034675	Erinaceus europaeus	90.54	3.00e-178	617.00
IUUC-Fca-035612	Felis catus	90.85	9.00e-179	619.00
IUUC-Fal-036922	Ficedula albicollis	91.36	3.00e-40	155.00
IUUC-Gmo-039648	Gadus morhua	96.23	0.00e+00	640.00
IUUC-Gga-040474	Gallus gallus	91.48	7.00e-180	622.00
IUUC-Gac-041951	Gasterosteus aculeatus	97.48	0.00e+00	650.00
IUUC-Ggo-045126	Gorilla gorilla	90.57	3.00e-177	614.00
IUUC-Hsa-046402	Homo sapiens	90.85	9.00e-179	619.00
IUUC-Itr-047895	Ictidomys tridecemlineatus	90.85	9.00e-179	619.00
IUUC-Lch-050266	Latimeria chalumnae	93.71	0.00e+00	634.00
IUUC-Loc-052547	Lepisosteus oculatus	96.86	0.00e+00	646.00
IUUC-Laf-054332	Loxodonta africana	90.57	3.00e-177	613.00
IUUC-Mcc-055869	Macaca mulatta	90.85	9.00e-179	619.00
IUUC-Meu-056735	Macropus eugenii	90.59	1.00e-160	558.00
IUUC-Mga-060100	Meleagris gallopavo	91.48	7.00e-180	622.00
IUUC-Mmr-061382	Microcebus murinus	90.85	9.00e-179	619.00
IUUC-Mmu-064225	Mus musculus	90.54	2.00e-178	617.00
IUUC-Mpu-066709	Mustela putorius furo	90.85	9.00e-179	619.00
IUUC-Mlu-067168	Myotis lucifugus	89.91	6.00e-178	616.00
IUUC-Nle-070176	Nomascus leucogenys	90.85	9.00e-179	619.00
IUUC-Opr-070259	Ochotona princeps	90.54	2.00e-178	618.00
IUUC-Ont-071235	Oreochromis niloticus	97.48	0.00e+00	651.00
IUUC-Oan-072850	Ornithorhynchus anatinus	90.79	2.00e-80	291.00
IUUC-Ocu-074165	Oryctolagus cuniculus	90.54	2.00e-178	618.00
IUUC-Ola-086658	Oryzias latipes	95.60	0.00e+00	637.00
IUUC-Oga-088933	Otolemur garnettii	90.85	9.00e-179	619.00
IUUC-Oar-090089	Ovis aries	90.85	1.00e-178	618.00
IUUC-Ptr-091263	Pan troglodytes	90.85	9.00e-179	619.00
IUUC-Pan-092926	Papio anubis	90.85	9.00e-179	619.00
IUUC-Psi-093934	Pelodiscus sinensis	83.96	2.00e-161	561.00
IUUC-Pma-094578	Petromyzon marinus	69.59	7.00e-129	453.00
IUUC-Pfo-097431	Poecilia formosa	97.17	0.00e+00	649.00
IUUC-Pab-097852	Pongo abelii	90.85	9.00e-179	619.00
IUUC-Pca-100496	Procavia capensis	83.33	6.00e-158	550.00
IUUC-Pva-103157	Pteropus vampyrus	89.00	2.00e-107	380.00
IUUC-Pgr-103416	Puccinia graminis	33.01	9.00e-14	71.60
IUUC-Ptt-103843	Puccinia triticina	36.59	8.00e-05	41.60
IUUC-Rno-105928	Rattus norvegicus	90.85	7.00e-179	619.00
IUUC-Sha-107556	Sarcophilus harrisii	90.25	8.00e-177	612.00
IUUC-Sar-113208	Sorex araneus	90.85	9.00e-179	619.00
IUUC-Ssc-116011	Sus scrofa	90.85	1.00e-178	618.00
IUUC-Tgu-116882	Taeniopygia guttata	71.50	4.00e-71	260.00
IUUC-Tru-117987	Takifugu rubripes	97.17	0.00e+00	648.00
IUUC-Tsy-118785	Tarsius syrichta	90.54	7.00e-177	612.00
IUUC-Tni-120165	Tetraodon nigroviridis	96.86	0.00e+00	647.00
IUUC-Tbe-127920	Tupaia belangeri	89.50	2.00e-109	387.00
IUUC-Ttr-129160	Tursiops truncatus	90.54	3.00e-178	617.00
IUUC-Vpa-130629	Vicugna pacos	90.85	9.00e-179	619.00
IUUC-Xtr-131895	Xenopus tropicalis	90.54	1.00e-177	615.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence