iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050266

Ensembl Protein ID

ENSLACP00000020026.1

UniProt Accession

H3BDQ5; H3BDQ5_LATCH

Genbank Protein ID

ENSLACP00000020026

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01034237

Gene Name

RNF41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000017605.1	ENSLACT00000020164.1	ENSLACP00000020026.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.60e-06	27.6	18	57
E3 activity/RING/U-box	1.90e-06	28.1	12	69

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC   +++ p+  p C H+f+  C+ +w       s++++CP++r
   Q: 18   CPICSGVLEE-PVQAPhCEHAFCNACITQW------FSQQQTCPVDR 57
           ****999999.777777*************......********987 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnl 59
           v e+++CpI   + ++Pv +p + + +  ++I +w++++++ cPv+r+ +t   l P  
   Q: 12   VDEDLICPICSGVLEEPVQAPhCEHAFCNACITQWFSQQQT-CPVDRSVVTLGHLRPVP 69
           56899******************************998887.*******9999998864 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MGYDVTRFQG EVDEDLICPI CSGVLEEPVQ APHCEHAFCN ACITQWFSQQ QTCPVDRSVV 60
TLGHLRPVPR IMRNMLSKLQ IMCDNAVFGC SAVVRLDQLA SHLNDCEHNP KRPVTCEQGC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGATTGGTCA GCTTCCCCGA CAGCCTGGGA GCCGCCAGCA GCGACGGTCC GCCTCTAAGC 60
CCCGCCGACT TTTTTTTTTG TTTGTTGTTT TTTTTTTTTT TTTTTTTTTT TTTGCGTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR008974--TRAF-like
IPR015036--USP8_interacting
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF08941--USP8_interact

SMART

SM00184--RING

Gene Ontology

GO:0016881--F:acid-amino acid ligase activity
GO:0031386--F:protein tag
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

lcm:102359838

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002398	Ailuropoda melanoleuca	93.38	0.00e+00	629.00
IUUC-Apl-003568	Anas platyrhynchos	93.08	3.00e-179	620.00
IUUC-Aca-005119	Anolis carolinensis	93.69	0.00e+00	632.00
IUUC-Ame-010708	Astyanax mexicanus	94.03	0.00e+00	635.00
IUUC-Bta-013428	Bos taurus	88.01	3.00e-170	590.00
IUUC-Cja-019844	Callithrix jacchus	93.40	0.00e+00	626.00
IUUC-Cfa-021124	Canis familiaris	93.69	0.00e+00	630.00
IUUC-Cpo-022325	Cavia porcellus	93.38	0.00e+00	629.00
IUUC-Csa-023113	Chlorocebus sabaeus	93.69	0.00e+00	630.00
IUUC-Cho-024991	Choloepus hoffmanni	93.81	4.00e-109	386.00
IUUC-Cne-026870	Cryptococcus neoformans	38.52	1.00e-19	91.70
IUUC-Dre-028730	Danio rerio	93.71	0.00e+00	634.00
IUUC-Dno-028908	Dasypus novemcinctus	93.03	1.00e-163	568.00
IUUC-Dor-030411	Dipodomys ordii	93.38	0.00e+00	630.00
IUUC-Dse-031478	Dothistroma septosporum	32.04	2.00e-10	60.80
IUUC-Dme-031868	Drosophila melanogaster	58.10	4.00e-112	397.00
IUUC-Ete-032896	Echinops telfairi	76.23	8.00e-119	419.00
IUUC-Eca-034135	Equus caballus	93.69	0.00e+00	630.00
IUUC-Eeu-034675	Erinaceus europaeus	93.38	0.00e+00	629.00
IUUC-Fca-035612	Felis catus	93.69	0.00e+00	630.00
IUUC-Fal-036922	Ficedula albicollis	93.83	5.00e-41	157.00
IUUC-Gmo-039648	Gadus morhua	90.25	1.00e-176	612.00
IUUC-Gga-040474	Gallus gallus	94.01	0.00e+00	634.00
IUUC-Gac-041951	Gasterosteus aculeatus	91.51	1.00e-179	621.00
IUUC-Ggo-045126	Gorilla gorilla	93.40	0.00e+00	626.00
IUUC-Hsa-046402	Homo sapiens	93.69	0.00e+00	630.00
IUUC-Itr-047895	Ictidomys tridecemlineatus	93.69	0.00e+00	630.00
IUUC-Loc-052547	Lepisosteus oculatus	94.97	0.00e+00	639.00
IUUC-Laf-054332	Loxodonta africana	93.08	0.00e+00	625.00
IUUC-Mcc-055869	Macaca mulatta	93.69	0.00e+00	630.00
IUUC-Meu-056735	Macropus eugenii	93.38	6.00e-164	569.00
IUUC-Mga-060100	Meleagris gallopavo	94.01	0.00e+00	634.00
IUUC-Mmr-061382	Microcebus murinus	93.69	0.00e+00	630.00
IUUC-Mmu-064225	Mus musculus	93.38	0.00e+00	629.00
IUUC-Mpu-066709	Mustela putorius furo	93.69	0.00e+00	630.00
IUUC-Mlu-067168	Myotis lucifugus	92.74	0.00e+00	628.00
IUUC-Nle-070176	Nomascus leucogenys	93.69	0.00e+00	630.00
IUUC-Opr-070259	Ochotona princeps	94.01	0.00e+00	632.00
IUUC-Ont-071235	Oreochromis niloticus	92.77	0.00e+00	629.00
IUUC-Oan-072850	Ornithorhynchus anatinus	90.79	2.00e-80	292.00
IUUC-Ocu-074165	Oryctolagus cuniculus	94.01	0.00e+00	632.00
IUUC-Ola-086658	Oryzias latipes	91.19	3.00e-178	617.00
IUUC-Oga-088933	Otolemur garnettii	93.69	0.00e+00	630.00
IUUC-Oar-090089	Ovis aries	93.38	0.00e+00	630.00
IUUC-Ptr-091263	Pan troglodytes	93.69	0.00e+00	630.00
IUUC-Pan-092926	Papio anubis	93.69	0.00e+00	630.00
IUUC-Psi-093934	Pelodiscus sinensis	86.16	2.00e-164	571.00
IUUC-Pma-094578	Petromyzon marinus	69.28	9.00e-128	449.00
IUUC-Pfo-097431	Poecilia formosa	92.77	0.00e+00	628.00
IUUC-Pab-097852	Pongo abelii	93.69	0.00e+00	630.00
IUUC-Pca-100496	Procavia capensis	85.53	2.00e-160	558.00
IUUC-Pva-103157	Pteropus vampyrus	93.50	2.00e-111	394.00
IUUC-Pgr-103416	Puccinia graminis	33.65	8.00e-14	71.60
IUUC-Rno-105928	Rattus norvegicus	93.69	0.00e+00	631.00
IUUC-Sha-107556	Sarcophilus harrisii	93.08	2.00e-180	624.00
IUUC-Sar-113208	Sorex araneus	93.69	0.00e+00	630.00
IUUC-Ssc-116011	Sus scrofa	93.38	0.00e+00	630.00
IUUC-Tgu-116882	Taeniopygia guttata	71.50	2.00e-71	261.00
IUUC-Tru-117987	Takifugu rubripes	92.45	1.00e-180	625.00
IUUC-Tsy-118785	Tarsius syrichta	93.38	1.00e-180	624.00
IUUC-Tni-120165	Tetraodon nigroviridis	92.14	2.00e-180	624.00
IUUC-Tbe-127920	Tupaia belangeri	94.00	2.00e-113	400.00
IUUC-Ttr-129160	Tursiops truncatus	93.06	0.00e+00	629.00
IUUC-Vpa-130629	Vicugna pacos	93.69	0.00e+00	630.00
IUUC-Xtr-131895	Xenopus tropicalis	92.43	1.00e-180	625.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence