iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tgu-117326

Ensembl Protein ID

ENSTGUP00000010018.1

UniProt Accession

H0ZHF3; H0ZHF3_TAEGU

Genbank Protein ID

ENSTGUP00000010018

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01015275

Gene Name

LDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000009708.1	ENSTGUT00000010125.1	ENSTGUP00000010018.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	63.72	6.00e-121	431.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MSSTPHDPFY SSPFGPFYRR HTPYMVQPEY RIYEMNKRLQ SRTEDSDNLW WDAFATEFFE 60
DDATLTLSFC LEDGPKRYTI GRTLIPRYFS TVFEGGVTDL YYILKHSKES YHNSSITVDC 120

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Nucleotide Sequence
(Fasta)

ATGTGTGTGT GTGTGTGCGC GCCGCTACTT TGTACTGTGA AGAACACACA GCCCATGTGC 60
TCTGTATGGA TGTTGATGAT ACTCTGTGTA GCTTGAATCT CTGCAAGCAG GCAAGATGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0005730--C:nucleolus
GO:0005886--C:plasma membrane
GO:0005667--C:transcription factor complex
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0010669--P:epithelial structure maintenance
GO:0044089--P:positive regulation of cellular component biogenesis
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance

KEGG

tgu:100217998

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	24.06	6.00e-04	39.70
IUUC-Aml-002031	Ailuropoda melanoleuca	77.37	2.00e-153	535.00
IUUC-Atr-003083	Amborella trichopoda	20.36	9.00e-05	42.40
IUUC-Apl-004210	Anas platyrhynchos	80.42	1.00e-119	421.00
IUUC-Aca-005241	Anolis carolinensis	78.49	2.00e-155	541.00
IUUC-Aly-006204	Arabidopsis lyrata	24.56	2.00e-06	48.10
IUUC-Ath-007339	Arabidopsis thaliana	24.56	2.00e-06	48.10
IUUC-Ame-010910	Astyanax mexicanus	73.46	3.00e-149	520.00
IUUC-Bgr-012180	Blumeria graminis	22.61	5.00e-07	49.30
IUUC-Bta-012596	Bos taurus	96.23	0.00e+00	670.00
IUUC-Bci-013927	Botrytis cinerea	28.57	1.00e-08	54.70
IUUC-Bol-015721	Brassica oleracea	24.40	7.00e-07	48.90
IUUC-Bra-017183	Brassica rapa	24.40	7.00e-07	48.90
IUUC-Cel-018189	Caenorhabditis elegans	34.22	3.00e-29	122.00
IUUC-Cja-019586	Callithrix jacchus	97.32	0.00e+00	682.00
IUUC-Cfa-021188	Canis familiaris	77.37	5.00e-153	533.00
IUUC-Cpo-022350	Cavia porcellus	77.37	1.00e-151	528.00
IUUC-Csa-023816	Chlorocebus sabaeus	77.65	1.00e-153	535.00
IUUC-Cho-024958	Choloepus hoffmanni	80.10	1.00e-93	335.00
IUUC-Cin-025721	Ciona intestinalis	52.81	1.00e-94	338.00
IUUC-Csv-026065	Ciona savignyi	55.14	2.00e-98	351.00
IUUC-Dre-027356	Danio rerio	82.99	0.00e+00	635.00
IUUC-Dno-029918	Dasypus novemcinctus	77.81	1.00e-148	518.00
IUUC-Dor-030634	Dipodomys ordii	77.37	3.00e-153	533.00
IUUC-Dse-031245	Dothistroma septosporum	25.00	5.00e-04	39.70
IUUC-Dme-031667	Drosophila melanogaster	63.93	8.00e-126	443.00
IUUC-Ete-032246	Echinops telfairi	94.64	0.00e+00	654.00
IUUC-Eca-034015	Equus caballus	97.05	0.00e+00	681.00
IUUC-Eeu-034902	Erinaceus europaeus	77.37	3.00e-153	533.00
IUUC-Fca-035903	Felis catus	76.94	2.00e-151	528.00
IUUC-Fal-037407	Ficedula albicollis	99.73	0.00e+00	674.00
IUUC-Gmo-039466	Gadus morhua	74.65	2.00e-156	545.00
IUUC-Ggr-040030	Gaeumannomyces graminis	23.98	3.00e-05	43.50
IUUC-Gga-040214	Gallus gallus	78.93	7.00e-157	546.00
IUUC-Gac-042214	Gasterosteus aculeatus	74.52	2.00e-158	551.00
IUUC-Gma-042794	Glycine max	24.34	9.00e-09	55.50
IUUC-Ggo-044988	Gorilla gorilla	97.32	0.00e+00	687.00
IUUC-Hsa-046092	Homo sapiens	98.11	0.00e+00	690.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	77.37	4.00e-153	533.00
IUUC-Lch-049895	Latimeria chalumnae	89.16	7.00e-108	382.00
IUUC-Lpe-050806	Leersia perrieri	26.58	4.00e-05	43.10
IUUC-Loc-052845	Lepisosteus oculatus	75.91	2.00e-155	541.00
IUUC-Lma-053090	Leptosphaeria maculans	25.20	3.00e-06	47.00
IUUC-Laf-054538	Loxodonta africana	76.42	1.00e-155	541.00
IUUC-Mcc-055116	Macaca mulatta	98.64	3.00e-155	540.00
IUUC-Meu-056777	Macropus eugenii	72.07	7.00e-138	483.00
IUUC-Mpo-057376	Magnaporthe poae	24.28	2.00e-05	44.30
IUUC-Mtr-058142	Medicago truncatula	25.38	3.00e-08	53.90
IUUC-Mga-059716	Meleagris gallopavo	98.65	0.00e+00	669.00
IUUC-Mmr-060649	Microcebus murinus	96.78	0.00e+00	682.00
IUUC-Mdo-062535	Monodelphis domestica	98.12	0.00e+00	678.00
IUUC-Mmu-064036	Mus musculus	95.96	0.00e+00	684.00
IUUC-Mac-065338	Musa acuminata	24.31	4.00e-06	46.60
IUUC-Mpu-065719	Mustela putorius furo	77.37	4.00e-153	533.00
IUUC-Mlu-067219	Myotis lucifugus	76.39	2.00e-150	524.00
IUUC-Ncr-068691	Neurospora crassa	20.61	4.00e-04	40.00
IUUC-Nle-068983	Nomascus leucogenys	97.46	0.00e+00	647.00
IUUC-Opr-070467	Ochotona princeps	77.37	3.00e-153	533.00
IUUC-Ont-071566	Oreochromis niloticus	75.98	3.00e-159	554.00
IUUC-Oan-073368	Ornithorhynchus anatinus	77.93	1.00e-153	535.00
IUUC-Ocu-074854	Oryctolagus cuniculus	96.37	0.00e+00	650.00
IUUC-Ola-086364	Oryzias latipes	75.70	7.00e-159	552.00
IUUC-Oga-088235	Otolemur garnettii	96.25	0.00e+00	672.00
IUUC-Oar-089547	Ovis aries	77.37	5.00e-153	533.00
IUUC-Ptr-091423	Pan troglodytes	97.32	0.00e+00	682.00
IUUC-Pan-092378	Papio anubis	77.65	1.00e-153	535.00
IUUC-Psi-093638	Pelodiscus sinensis	98.39	0.00e+00	669.00
IUUC-Pma-094384	Petromyzon marinus	64.20	8.00e-55	205.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.18	6.00e-07	48.90
IUUC-Pfo-096031	Poecilia formosa	75.14	4.00e-160	556.00
IUUC-Pab-097886	Pongo abelii	97.46	0.00e+00	647.00
IUUC-Pop-099430	Populus trichocarpa	25.47	1.00e-06	48.50
IUUC-Pca-101138	Procavia capensis	77.37	3.00e-153	533.00
IUUC-Ppe-101293	Prunus persica	24.11	1.00e-07	51.60
IUUC-Pva-103215	Pteropus vampyrus	96.78	0.00e+00	684.00
IUUC-Pte-104238	Pyrenophora teres	29.49	9.00e-06	44.70
IUUC-Rno-105968	Rattus norvegicus	96.50	0.00e+00	688.00
IUUC-Sha-107595	Sarcophilus harrisii	77.09	4.00e-151	527.00
IUUC-Sja-107950	Schizosaccharomyces japonicus	16.97	3.00e-05	42.40
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.68	3.00e-06	46.60
IUUC-Smo-109552	Selaginella moellendorffii	20.08	4.00e-06	46.60
IUUC-Sly-110873	Solanum lycopersicum	26.09	3.00e-07	50.40
IUUC-Stu-112586	Solanum tuberosum	20.96	4.00e-06	46.60
IUUC-Sar-113076	Sorex araneus	91.13	9.00e-136	476.00
IUUC-Sre-115143	Sporisorium reilianum	23.81	1.10e-01	32.00
IUUC-Ssc-115755	Sus scrofa	77.81	7.00e-155	539.00
IUUC-Tru-117858	Takifugu rubripes	84.88	0.00e+00	640.00
IUUC-Tsy-119296	Tarsius syrichta	90.62	1.00e-177	614.00
IUUC-Tni-119822	Tetraodon nigroviridis	74.79	1.00e-157	548.00
IUUC-Tca-120935	Theobroma cacao	25.38	3.00e-08	53.90
IUUC-Tbe-127366	Tupaia belangeri	76.54	5.00e-148	516.00
IUUC-Ttr-128484	Tursiops truncatus	86.06	6.00e-169	586.00
IUUC-Vpa-130304	Vicugna pacos	97.97	3.00e-154	536.00
IUUC-Vvi-131560	Vitis vinifera	23.01	5.00e-06	46.20
IUUC-Xtr-132062	Xenopus tropicalis	78.93	6.00e-157	546.00
IUUC-Xma-134288	Xiphophorus maculatus	76.26	4.00e-160	556.00
IUUC-Yli-134374	Yarrowia lipolytica	20.47	2.00e-03	37.40
IUUC-Zma-135310	Zea mays	24.61	4.00e-04	40.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence