iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108138

Ensembl Protein ID

SPCC4G3.19.1:pep

UniProt Accession

P87244; ALP16_SCHPO

Genbank Protein ID

BAB79248.1; CAB09763.1

Protein Name

Spindle pole body component alp16; Altered polarity protein 16

Genbank Nucleotide ID

AB074978; CU329672

Gene Name

alp16; SPCC4G3.19

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPCC4G3.19	SPCC4G3.19.1	SPCC4G3.19.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	HINT	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UDP/UBQ/UBQ_PIM	28.38	1.80e-01	36.20	IUUC-Hsa-045676

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Component of the gamma tubule complex that is required for the regulation of both interphase microtubules and mitotic bipolar spindles.

Protein Sequence
(Fasta)

MDGIMKNDLL WFGNHVFDLT PNSFDSDFVE QLSKFEGKEG LKRKLFDSSE YFQNFSFQVN 60
DDLLGKDVIL DISNQQLTPA VPGCETSSNS KLISASKEIT SERKRAKSSV SPSYLTDSSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTAAACAAA CTTGAATTAG TGATTGCAAC ATTTCTTTTG CCAACAATAT TTAAATCCTT 60
CATTGCTTGA CACATGGTTT TATGAGAAAA ATTAAGAAAG AACATTAAGT ACTTCAAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-0498--Mitosis
KW-1185--Reference proteome

Interpro

IPR007259--GCP

Pfam

PF04130--Spc97_Spc98

Gene Ontology

GO:0000930--C:gamma-tubulin complex
GO:0000931--C:gamma-tubulin large complex
GO:0055031--C:gamma-tubulin large complex, equatorial microtubule organizing center
GO:0008274--C:gamma-tubulin ring complex
GO:0008275--C:gamma-tubulin small complex
GO:0005874--C:microtubule
GO:0044732--C:mitotic spindle pole body
GO:0000922--C:spindle pole
GO:0005816--C:spindle pole body
GO:0043015--F:gamma-tubulin binding
GO:0005200--F:structural constituent of cytoskeleton
GO:0051301--P:cell division
GO:0031122--P:cytoplasmic microtubule organization
GO:0051415--P:interphase microtubule nucleation by interphase microtubule organizing center
GO:0007126--P:meiotic nuclear division
GO:0000226--P:microtubule cytoskeleton organization
GO:0090307--P:mitotic spindle assembly

KEGG

spo:SPCC4G3.19

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005002	Anolis carolinensis	44.44	9.10e-02	28.50
IUUC-Cho-024663	Choloepus hoffmanni	44.44	9.90e-02	28.10
IUUC-Dse-031313	Dothistroma septosporum	21.27	1.50e-01	29.30
IUUC-Ete-032269	Echinops telfairi	44.44	9.90e-02	28.10
IUUC-Fca-035470	Felis catus	44.44	9.90e-02	28.10
IUUC-Ggo-044781	Gorilla gorilla	28.38	8.00e-04	35.80
IUUC-Hsa-045676	Homo sapiens	28.38	4.00e-04	37.00
IUUC-Itr-048759	Ictidomys tridecemlineatus	44.44	9.90e-02	28.10
IUUC-Meu-056513	Macropus eugenii	44.44	1.00e-01	28.10
IUUC-Olo-080915	Oryza longistaminata	27.40	4.90e-01	26.60
IUUC-Oga-088470	Otolemur garnettii	44.44	9.90e-02	28.10
IUUC-Pan-092194	Papio anubis	27.03	3.00e-03	34.30
IUUC-Pab-098046	Pongo abelii	30.43	8.00e-04	35.80
IUUC-Pva-102927	Pteropus vampyrus	44.44	9.90e-02	28.10

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence