iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093918

Ensembl Protein ID

ENSPSIP00000014677.1

UniProt Accession

K7G316; K7G316_PELSI

Genbank Protein ID

ENSPSIP00000014677

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01134152

Gene Name

KDM5B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000013008.1	ENSPSIT00000014746.1	ENSPSIP00000014677.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.90e-21	74.0	119	165

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vCl+Cg+g +++  l+ C+ C++ +H  Cl ++   ++p+ + w Cp+C 
   Q: 119  VCLLCGSGNDED-RLLLCDGCDDSYHTFCLIPP-LHDVPKGD-WRCPQCL 165
           8********988.6*******************.*******7.******5 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

CLQKPDLTND TKDKEYKPHD IPQRQSVQPS ETCPPARRAK RMRAEATNIK MESDETTEAK 60
THNLRRRMGC ISANGNVSEK EMPGTVKREP AEKREQRDFE KEKSKGRSKK STNAVDLYVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTTTGCAG AAGCCAGATC TCACCAATGA TACAAAGGAC AAGGAATACA AACCCCACGA 60
TATTCCTCAG AGACAGTCTG TTCAGCCTTC TGAAACTTGT CCCCCTGCAC GTCGAGCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0034648--F:histone demethylase activity (H3-dimethyl-K4 specific)
GO:0034647--F:histone demethylase activity (H3-trimethyl-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0010628--P:positive regulation of gene expression
GO:0033601--P:positive regulation of mammary gland epithelial cell proliferation
GO:0009791--P:post-embryonic development
GO:2000864--P:regulation of estradiol secretion
GO:0007338--P:single fertilization
GO:0061038--P:uterus morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001963	Ailuropoda melanoleuca	83.06	0.00e+00	2201.00
IUUC-Apl-003770	Anas platyrhynchos	87.64	0.00e+00	1994.00
IUUC-Aca-004867	Anolis carolinensis	82.42	0.00e+00	2224.00
IUUC-Ani-009139	Aspergillus nidulans	32.04	7.00e-111	395.00
IUUC-Ame-010620	Astyanax mexicanus	60.90	0.00e+00	1592.00
IUUC-Bta-012733	Bos taurus	80.22	0.00e+00	2113.00
IUUC-Bci-013992	Botrytis cinerea	34.48	2.00e-107	384.00
IUUC-Bol-015336	Brassica oleracea	36.45	2.00e-14	75.50
IUUC-Cja-019050	Callithrix jacchus	82.75	0.00e+00	2220.00
IUUC-Cfa-021015	Canis familiaris	82.53	0.00e+00	2199.00
IUUC-Cpo-022340	Cavia porcellus	83.12	0.00e+00	2175.00
IUUC-Cre-022637	Chlamydomonas reinhardtii	49.06	9.00e-08	47.80
IUUC-Csa-023441	Chlorocebus sabaeus	82.98	0.00e+00	2194.00
IUUC-Cho-024823	Choloepus hoffmanni	89.14	0.00e+00	1244.00
IUUC-Cne-026851	Cryptococcus neoformans	29.65	2.00e-114	408.00
IUUC-Dre-027707	Danio rerio	58.94	0.00e+00	1526.00
IUUC-Dno-028978	Dasypus novemcinctus	83.12	0.00e+00	2191.00
IUUC-Dor-030854	Dipodomys ordii	74.73	0.00e+00	1682.00
IUUC-Ete-032760	Echinops telfairi	80.22	0.00e+00	1659.00
IUUC-Eca-034370	Equus caballus	82.83	0.00e+00	2124.00
IUUC-Eeu-035012	Erinaceus europaeus	70.76	0.00e+00	1555.00
IUUC-Fca-035494	Felis catus	83.05	0.00e+00	2185.00
IUUC-Fal-037631	Ficedula albicollis	85.07	0.00e+00	2262.00
IUUC-Fox-037694	Fusarium oxysporum	31.91	2.00e-98	354.00
IUUC-Gmo-039522	Gadus morhua	54.48	0.00e+00	1381.00
IUUC-Ggr-039929	Gaeumannomyces graminis	33.01	7.00e-103	369.00
IUUC-Gga-040802	Gallus gallus	86.74	0.00e+00	2225.00
IUUC-Gac-041563	Gasterosteus aculeatus	58.80	0.00e+00	1521.00
IUUC-Gma-042675	Glycine max	34.62	2.00e-101	364.00
IUUC-Ggo-044856	Gorilla gorilla	65.81	0.00e+00	1598.00
IUUC-Hsa-045888	Homo sapiens	80.75	0.00e+00	2196.00
IUUC-Hvu-047583	Hordeum vulgare	43.04	7.00e-16	79.30
IUUC-Itr-048297	Ictidomys tridecemlineatus	83.12	0.00e+00	2167.00
IUUC-Lch-050483	Latimeria chalumnae	62.74	0.00e+00	1705.00
IUUC-Loc-052550	Lepisosteus oculatus	67.47	0.00e+00	1756.00
IUUC-Laf-053761	Loxodonta africana	82.90	0.00e+00	2194.00
IUUC-Mcc-055505	Macaca mulatta	80.82	0.00e+00	2196.00
IUUC-Mpo-057317	Magnaporthe poae	34.25	1.00e-105	378.00
IUUC-Mga-059358	Meleagris gallopavo	86.01	0.00e+00	2293.00
IUUC-Mmr-060863	Microcebus murinus	82.54	0.00e+00	2167.00
IUUC-Mdo-061957	Monodelphis domestica	84.38	0.00e+00	2259.00
IUUC-Mmu-063944	Mus musculus	81.42	0.00e+00	2128.00
IUUC-Mac-065069	Musa acuminata	35.14	4.00e-08	54.70
IUUC-Mpu-066719	Mustela putorius furo	81.20	0.00e+00	2171.00
IUUC-Mlu-068086	Myotis lucifugus	77.60	0.00e+00	2026.00
IUUC-Ncr-068763	Neurospora crassa	34.01	4.00e-105	376.00
IUUC-Nle-069256	Nomascus leucogenys	80.97	0.00e+00	2201.00
IUUC-Ont-071756	Oreochromis niloticus	59.15	0.00e+00	1558.00
IUUC-Oan-073568	Ornithorhynchus anatinus	84.02	0.00e+00	2253.00
IUUC-Ocu-073961	Oryctolagus cuniculus	81.09	0.00e+00	2138.00
IUUC-Ogl-077886	Oryza glaberrima	38.83	2.00e-16	81.60
IUUC-Oin-079273	Oryza indica	50.00	2.00e-13	68.20
IUUC-Olo-080668	Oryza longistaminata	38.83	5.00e-16	80.90
IUUC-Osa-085487	Oryza sativa	38.83	2.00e-16	81.60
IUUC-Ola-086448	Oryzias latipes	57.35	0.00e+00	1504.00
IUUC-Oga-088501	Otolemur garnettii	79.19	0.00e+00	2065.00
IUUC-Oar-090162	Ovis aries	79.42	0.00e+00	2101.00
IUUC-Ptr-090816	Pan troglodytes	80.89	0.00e+00	2205.00
IUUC-Pan-092764	Papio anubis	82.98	0.00e+00	2195.00
IUUC-Ppa-095839	Physcomitrella patens	44.58	3.00e-16	81.60
IUUC-Pfo-096672	Poecilia formosa	59.03	0.00e+00	1483.00
IUUC-Pab-097854	Pongo abelii	82.86	0.00e+00	1671.00
IUUC-Pop-099385	Populus trichocarpa	52.17	7.00e-12	65.50
IUUC-Pca-100241	Procavia capensis	78.11	0.00e+00	1551.00
IUUC-Ppe-101504	Prunus persica	32.12	8.00e-102	365.00
IUUC-Pva-103035	Pteropus vampyrus	77.67	0.00e+00	1830.00
IUUC-Rno-105574	Rattus norvegicus	80.04	0.00e+00	2078.00
IUUC-Sce-106207	Saccharomyces cerevisiae	35.99	5.00e-75	275.00
IUUC-Sar-113477	Sorex araneus	80.25	0.00e+00	1951.00
IUUC-Ssc-116132	Sus scrofa	84.47	0.00e+00	1901.00
IUUC-Tgu-117452	Taeniopygia guttata	86.46	0.00e+00	2283.00
IUUC-Tru-117561	Takifugu rubripes	59.42	0.00e+00	1389.00
IUUC-Tsy-119271	Tarsius syrichta	82.08	0.00e+00	1910.00
IUUC-Tni-119650	Tetraodon nigroviridis	61.98	0.00e+00	1429.00
IUUC-Tbe-127890	Tupaia belangeri	74.25	0.00e+00	1300.00
IUUC-Ttr-128546	Tursiops truncatus	80.30	0.00e+00	1528.00
IUUC-Vda-129733	Verticillium dahliae	29.70	5.00e-100	359.00
IUUC-Vpa-130432	Vicugna pacos	79.25	0.00e+00	1410.00
IUUC-Vvi-131071	Vitis vinifera	30.60	6.00e-82	299.00
IUUC-Xtr-132008	Xenopus tropicalis	68.29	0.00e+00	1819.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence