iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.....qkwpglknssskefrCPlCr 46
           C++Cl+++  ++++ pCgH+ +++C      qk+ g+++ s   ++CP Cr
   Q: 606  CSVCLDPCLAPVFIIPCGHFTCQECMsmlvgQKY-GSSSTSTIIAKCPMCR 655
           ********999********99****855566666.77777777778****8 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MDSLSAYPPQ STFQQLQNDE ELARRLQDEW NSSSPSSAPS SSSSQNQVEL DEQFARSLQN 60
SQSSSYSLPP FDHPPSKNPT SSSLSTRKRW RQKRLWSFKN FPFRPPTRLT STPSNSSSLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCGCTATG CTACGCTAAT CCTGCCATTG TCAATCTTCG GCGATAGTGA GAAGAGTGGT 60
GCGAGTTGGA ATTTTTTGAA AAGCAAGATC TTCAACACAT CTCCAGAGCT TACAGTTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0347--Helicase
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0000790--C:nuclear chromatin
GO:0005634--C:nucleus
GO:0035861--C:site of double-strand break
GO:0005524--F:ATP binding
GO:0004003--F:ATP-dependent DNA helicase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006338--P:chromatin remodeling
GO:0006281--P:DNA repair
GO:0000724--P:double-strand break repair via homologous recombination
GO:1990505--P:mitotic DNA replication maintenance of fidelity
GO:0016567--P:protein ubiquitination

KEGG

spo:SPAC17A2.12

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001237	Ailuropoda melanoleuca	30.98	8.00e-74	270.00
IUUC-Bta-013391	Bos taurus	32.01	3.00e-83	301.00
IUUC-Cfa-020485	Canis familiaris	30.98	2.00e-74	272.00
IUUC-Cho-024891	Choloepus hoffmanni	30.90	5.00e-55	207.00
IUUC-Dno-029517	Dasypus novemcinctus	31.44	2.00e-75	275.00
IUUC-Eca-034058	Equus caballus	31.22	2.00e-71	262.00
IUUC-Eeu-034597	Erinaceus europaeus	27.30	3.00e-32	132.00
IUUC-Laf-054309	Loxodonta africana	31.44	8.00e-75	273.00
IUUC-Meu-056270	Macropus eugenii	29.58	2.00e-69	255.00
IUUC-Mvi-060409	Microbotryum violaceum	30.37	1.00e-86	312.00
IUUC-Mmr-061043	Microcebus murinus	31.15	3.00e-75	274.00
IUUC-Mdo-062919	Monodelphis domestica	29.43	9.00e-71	259.00
IUUC-Mpu-066781	Mustela putorius furo	30.98	7.00e-74	270.00
IUUC-Ncr-068723	Neurospora crassa	34.88	3.00e-119	421.00
IUUC-Ocu-074705	Oryctolagus cuniculus	31.55	2.00e-81	295.00
IUUC-Ola-086830	Oryzias latipes	32.61	4.00e-79	287.00
IUUC-Oga-088120	Otolemur garnettii	31.67	1.00e-71	262.00
IUUC-Oar-089293	Ovis aries	32.01	3.00e-83	301.00
IUUC-Psi-093626	Pelodiscus sinensis	32.69	2.00e-83	301.00
IUUC-Sha-107221	Sarcophilus harrisii	29.60	1.00e-70	259.00
IUUC-Ssc-116186	Sus scrofa	30.98	3.00e-81	294.00
IUUC-Tsy-118957	Tarsius syrichta	31.87	2.00e-79	288.00
IUUC-Tni-120618	Tetraodon nigroviridis	34.11	2.00e-87	315.00
IUUC-Tbe-127642	Tupaia belangeri	30.91	1.00e-32	133.00
IUUC-Vpa-130672	Vicugna pacos	31.27	1.00e-74	273.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence