iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-010858

Ensembl Protein ID

ENSAMXP00000013641.1

UniProt Accession

W5L1C9; W5L1C9_ASTMX

Genbank Protein ID

ENSAMXP00000013641

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01022770

Gene Name

WDR38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000013252.1	ENSAMXT00000013641.1	ENSAMXP00000013641.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-44	147.5	187	222
UBD/Beta-Prp	5.30e-92	308.4	62	293

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvl 35
           gH++ v cl+f ++++l+sGs+Dgt++vW ++++ +
   Q: 187  GHQGNVACLCFsTTGMLASGSWDGTVRVWLPKSHEC 222
           8**********655***************7666665 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           h+++++c  fs+d+ ++a++s d ++ +w+vt+   +++l gh+  v +v+fs dgk+lv+g+ D+t+ +wd +tg  v+ + gh++ v
   Q: 62   HTGPVKCCVFSKDGHFFASASHDCSVGIWSVTPIERVHTLTGHTRSVETVSFSVDGKWLVSGGWDNTALLWDTQTGIKVREFLGHSAAV 150
           7899************************************************************************************* PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
            s  fs +++ l++Gs+d t++vw l+ +++   tl+gh+g v c++++  + +l+sGs D+tvr+W  k+ +++  l g  +  v+++
   Q: 151  QSSFFSTDSQLLATGSWDCTVKVWSLDCDEETV-TLEGHQGNVACLCFST-TGMLASGSWDGTVRVWLPKSHECVFVLGGTEQVWVRCV 237
           *********************************.**************99.789************************999999***** PP
   S: 187  sfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgss 242
           +f+++g  l+s ++  tvk+wd+++g+c++ l+gh+d  +   fsp + +l sgs+
   Q: 238  AFSRDGLTLASTAEGDTVKIWDMESGRCIKCLRGHKDSAYGCTFSPSGALLTSGSD 293
           **********************************************9999999985 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

VNSHRRAQLR ISGVQYFSRH KGEVNCCSFS PDCQILLTCS DDGGLYLWHT VRGKLLAKVC 60
GHTGPVKCCV FSKDGHFFAS ASHDCSVGIW SVTPIERVHT LTGHTRSVET VSFSVDGKWL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTAACAGTC ACCGCAGGGC TCAGCTCAGG AGACCGTAAC TCTGGAGACA AAATGAAAAC 60
ACTGACAGCT AACGCCACAC TACTATCTTT TTTCTACAGG ACTAGACAGC ATCTGAGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001664	Ailuropoda melanoleuca	46.69	3.00e-74	271.00
IUUC-Bta-012352	Bos taurus	47.46	1.00e-76	279.00
IUUC-Cja-019585	Callithrix jacchus	47.75	3.00e-74	271.00
IUUC-Cfa-020062	Canis familiaris	45.82	2.00e-62	232.00
IUUC-Csa-023528	Chlorocebus sabaeus	49.15	1.00e-77	283.00
IUUC-Cin-025426	Ciona intestinalis	39.07	3.00e-49	188.00
IUUC-Dre-027740	Danio rerio	65.17	7.00e-66	243.00
IUUC-Dno-030012	Dasypus novemcinctus	42.56	2.00e-68	252.00
IUUC-Dor-030536	Dipodomys ordii	47.19	5.00e-57	214.00
IUUC-Ete-032871	Echinops telfairi	47.37	6.00e-56	210.00
IUUC-Eca-033729	Equus caballus	48.98	8.00e-79	286.00
IUUC-Eeu-034740	Erinaceus europaeus	48.14	6.00e-76	277.00
IUUC-Fca-036514	Felis catus	47.12	7.00e-77	280.00
IUUC-Fox-037826	Fusarium oxysporum	40.00	6.00e-44	174.00
IUUC-Ggo-044793	Gorilla gorilla	46.98	3.00e-74	271.00
IUUC-Hsa-046414	Homo sapiens	48.65	2.00e-75	275.00
IUUC-Itr-048798	Ictidomys tridecemlineatus	47.93	1.00e-69	256.00
IUUC-Lch-049905	Latimeria chalumnae	55.67	1.00e-91	329.00
IUUC-Loc-052101	Lepisosteus oculatus	59.66	8.00e-98	350.00
IUUC-Laf-053443	Loxodonta africana	45.45	2.00e-70	258.00
IUUC-Mcc-055346	Macaca mulatta	49.15	5.00e-78	284.00
IUUC-Meu-056531	Macropus eugenii	51.98	2.00e-60	225.00
IUUC-Mmr-061721	Microcebus murinus	48.23	1.00e-73	269.00
IUUC-Mdo-062379	Monodelphis domestica	53.63	5.00e-86	311.00
IUUC-Mmu-064175	Mus musculus	48.47	4.00e-77	281.00
IUUC-Mpu-066361	Mustela putorius furo	48.14	1.00e-77	283.00
IUUC-Mlu-067300	Myotis lucifugus	39.46	5.00e-48	184.00
IUUC-Nle-070150	Nomascus leucogenys	48.65	6.00e-75	273.00
IUUC-Opr-071060	Ochotona princeps	41.69	2.00e-51	195.00
IUUC-Ocu-074101	Oryctolagus cuniculus	47.92	3.00e-75	275.00
IUUC-Oga-088479	Otolemur garnettii	47.80	2.00e-75	275.00
IUUC-Oar-089608	Ovis aries	47.46	2.00e-76	279.00
IUUC-Ptr-091521	Pan troglodytes	49.15	7.00e-78	283.00
IUUC-Pan-092092	Papio anubis	49.49	4.00e-78	284.00
IUUC-Pab-098454	Pongo abelii	48.47	3.00e-76	278.00
IUUC-Pca-100981	Procavia capensis	48.81	5.00e-77	280.00
IUUC-Pva-102491	Pteropus vampyrus	48.47	3.00e-78	285.00
IUUC-Rno-105417	Rattus norvegicus	50.00	3.00e-72	265.00
IUUC-Sha-107649	Sarcophilus harrisii	52.60	1.00e-83	302.00
IUUC-Sar-113110	Sorex araneus	43.16	3.00e-45	175.00
IUUC-Ssc-116197	Sus scrofa	49.49	3.00e-79	288.00
IUUC-Tbe-127734	Tupaia belangeri	43.90	1.00e-35	143.00
IUUC-Ttr-128709	Tursiops truncatus	46.10	6.00e-70	257.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence