iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052582

Ensembl Protein ID

ENSLOCP00000016550.1

UniProt Accession

W5N7E1; W5N7E1_LEPOC

Genbank Protein ID

ENSLOCP00000016550

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01002055

Gene Name

DDX58

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000013422.1	ENSLOCT00000016580.1	ENSLOCP00000016550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/CARD	8.40e-18	64.9	102	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/CARD

   S: 5    yrlllstlqdrvrklLdvtdvldkylseflleeekelilaaaetkgnmqaaelLLktL..vqkegWfref 72
           +  ll +  + + k + +t+ ++  +  +ll+ e+e+i+a+   kgn ++a+++ ++L  ++k +W +++
   Q: 102  FKHLLDRIEQSFTKQIKPTEMIN-HMKDCLLARECEEIMAISLQKGNIAGAQKFTECLkrSDKSNWYKTL 170
           6789999****************.*******************************************997 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MYELEKENLK RFNSYIVKIL RPSYIKEFMV DYLRPEKAEQ IISEEGISVT SAAEMLMRSL 60
WTLDQDGWFV AFLNTLRAEG YTGLYEAIKE WDFKNIDSME PFKHLLDRIE QSFTKQIKPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATGAAT TAGAAAAGGA AAACTTAAAG AGGTTCAACA GTTATATTGT CAAAATACTC 60
CGCCCTTCCT ACATCAAGGA ATTTATGGTG GATTATCTCC GTCCAGGTAT GTCAAGTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR031964--CARD_dom
IPR011029--DEATH-like_dom
IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF16739--CARD_2
PF00271--Helicase_C
PF04851--ResIII
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001898	Ailuropoda melanoleuca	46.70	0.00e+00	800.00
IUUC-Apl-003966	Anas platyrhynchos	49.82	0.00e+00	823.00
IUUC-Aca-004499	Anolis carolinensis	43.04	0.00e+00	694.00
IUUC-Ang-009730	Aspergillus niger	30.88	1.20e-01	32.70
IUUC-Ame-011950	Astyanax mexicanus	54.56	0.00e+00	1006.00
IUUC-Bta-012489	Bos taurus	47.76	0.00e+00	809.00
IUUC-Cel-018230	Caenorhabditis elegans	30.01	1.00e-64	241.00
IUUC-Cja-018716	Callithrix jacchus	48.29	0.00e+00	821.00
IUUC-Cfa-020269	Canis familiaris	48.19	0.00e+00	833.00
IUUC-Cpo-022507	Cavia porcellus	47.38	0.00e+00	794.00
IUUC-Csa-024209	Chlorocebus sabaeus	48.61	0.00e+00	840.00
IUUC-Cho-025104	Choloepus hoffmanni	45.59	0.00e+00	673.00
IUUC-Cgl-026385	Colletotrichum gloeosporioides	25.71	4.00e-26	114.00
IUUC-Dno-028954	Dasypus novemcinctus	46.90	0.00e+00	793.00
IUUC-Eca-034039	Equus caballus	47.96	0.00e+00	818.00
IUUC-Eeu-035009	Erinaceus europaeus	48.92	1.00e-172	600.00
IUUC-Fca-036169	Felis catus	47.92	0.00e+00	823.00
IUUC-Fal-037579	Ficedula albicollis	48.47	0.00e+00	797.00
IUUC-Ggo-045318	Gorilla gorilla	50.23	0.00e+00	792.00
IUUC-Hsa-046671	Homo sapiens	48.82	0.00e+00	825.00
IUUC-Itr-047996	Ictidomys tridecemlineatus	47.07	0.00e+00	784.00
IUUC-Lch-050461	Latimeria chalumnae	52.96	0.00e+00	927.00
IUUC-Laf-054324	Loxodonta africana	47.82	0.00e+00	801.00
IUUC-Mcc-055390	Macaca mulatta	48.61	0.00e+00	838.00
IUUC-Mmr-061407	Microcebus murinus	47.96	0.00e+00	842.00
IUUC-Mmu-063939	Mus musculus	46.84	0.00e+00	798.00
IUUC-Mpu-066226	Mustela putorius furo	47.40	0.00e+00	788.00
IUUC-Mlu-068092	Myotis lucifugus	46.90	0.00e+00	781.00
IUUC-Opr-070246	Ochotona princeps	55.28	2.00e-100	360.00
IUUC-Oan-072742	Ornithorhynchus anatinus	48.43	0.00e+00	702.00
IUUC-Ocu-073959	Oryctolagus cuniculus	47.21	0.00e+00	819.00
IUUC-Oga-089173	Otolemur garnettii	47.63	0.00e+00	809.00
IUUC-Oar-089369	Ovis aries	47.22	0.00e+00	782.00
IUUC-Ptr-091032	Pan troglodytes	48.82	0.00e+00	825.00
IUUC-Pan-092383	Papio anubis	48.56	0.00e+00	839.00
IUUC-Psi-093432	Pelodiscus sinensis	51.50	0.00e+00	922.00
IUUC-Pab-098416	Pongo abelii	50.29	0.00e+00	803.00
IUUC-Pca-101006	Procavia capensis	55.16	2.00e-124	439.00
IUUC-Pva-102966	Pteropus vampyrus	47.54	0.00e+00	800.00
IUUC-Rno-105059	Rattus norvegicus	47.39	3.00e-148	518.00
IUUC-Sar-113202	Sorex araneus	47.09	0.00e+00	632.00
IUUC-Ssc-116120	Sus scrofa	45.83	0.00e+00	764.00
IUUC-Tgu-117314	Taeniopygia guttata	46.72	0.00e+00	783.00
IUUC-Tsy-119453	Tarsius syrichta	52.48	7.00e-149	521.00
IUUC-Ttr-128421	Tursiops truncatus	45.59	3.00e-180	625.00
IUUC-Vpa-130602	Vicugna pacos	46.66	0.00e+00	746.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence