iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	RAID2
Protein-protein Interaction
HINT
Post-translational Modifications (PTMs)
PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	84.25	4.00e-142	502.00	IUUC-Hsa-047015

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSDEGSKRGS RADSLEAEPP LPPPPPPPPP GESSLVPTSP RYRPPLPAPL ERIVGSGEPP 60
VELAPRRKGE PLPPLPPSRL PGDQEVSAAG DSCEGPRRLP EVKLPEAAAG KGSPAEPEAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGCCTCCA TCAGAGCCGA GCCGGCGGCT CCGCTGAACA GCCGCCTCTG CCGCCGCCGC 60
GCCGGTCCTC CGCGTCCTCT CCTGGTCCCG CCCTCCTAGT CCCTGCGTCC CGGTTCCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

rno:499558

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000992	Aegilops tauschii	34.29	6.00e-08	51.20
IUUC-Aml-001530	Ailuropoda melanoleuca	93.48	1.00e-134	472.00
IUUC-Apl-003523	Anas platyrhynchos	93.62	6.00e-134	469.00
IUUC-Aca-004368	Anolis carolinensis	89.38	1.00e-122	431.00
IUUC-Acl-008264	Aspergillus clavatus	30.69	2.00e-08	52.80
IUUC-Ang-009870	Aspergillus niger	27.84	3.00e-07	49.30
IUUC-Bta-013095	Bos taurus	93.69	2.00e-135	475.00
IUUC-Bdi-014187	Brachypodium distachyon	34.00	5.00e-09	54.70
IUUC-Bol-015388	Brassica oleracea	38.60	2.00e-08	52.40
IUUC-Bra-016996	Brassica rapa	38.60	1.00e-08	53.10
IUUC-Cja-019775	Callithrix jacchus	86.18	4.00e-150	524.00
IUUC-Cfa-020770	Canis familiaris	96.46	1.00e-122	431.00
IUUC-Cpo-021621	Cavia porcellus	96.88	2.00e-122	431.00
IUUC-Cre-022732	Chlamydomonas reinhardtii	37.74	7.00e-08	49.30
IUUC-Csa-023832	Chlorocebus sabaeus	83.63	1.00e-136	479.00
IUUC-Dno-028992	Dasypus novemcinctus	97.18	2.00e-93	333.00
IUUC-Dor-030131	Dipodomys ordii	96.41	3.00e-121	427.00
IUUC-Ete-032224	Echinops telfairi	93.53	1.00e-84	304.00
IUUC-Eca-034327	Equus caballus	97.74	1.00e-93	335.00
IUUC-Fca-036285	Felis catus	97.18	2.00e-93	333.00
IUUC-Fal-037405	Ficedula albicollis	92.77	4.00e-132	464.00
IUUC-Gga-040712	Gallus gallus	93.62	6.00e-134	469.00
IUUC-Ggo-044816	Gorilla gorilla	97.11	1.00e-133	468.00
IUUC-Hsa-047015	Homo sapiens	83.38	2.00e-141	495.00
IUUC-Hvu-047417	Hordeum vulgare	38.00	1.00e-09	56.60
IUUC-Itr-049040	Ictidomys tridecemlineatus	97.11	7.00e-134	469.00
IUUC-Lch-049580	Latimeria chalumnae	80.44	3.00e-103	367.00
IUUC-Loc-052242	Lepisosteus oculatus	77.12	1.00e-105	375.00
IUUC-Laf-054493	Loxodonta africana	97.06	9.00e-88	315.00
IUUC-Mcc-054837	Macaca mulatta	97.49	8.00e-132	463.00
IUUC-Mga-059607	Meleagris gallopavo	91.07	8.00e-123	432.00
IUUC-Mdo-062949	Monodelphis domestica	82.91	3.00e-132	465.00
IUUC-Mmu-063350	Mus musculus	97.00	0.00e+00	652.00
IUUC-Mpu-066267	Mustela putorius furo	89.90	7.00e-132	462.00
IUUC-Mlu-067169	Myotis lucifugus	97.86	4.00e-129	453.00
IUUC-Nle-070005	Nomascus leucogenys	84.21	4.00e-140	490.00
IUUC-Opr-070775	Ochotona princeps	95.91	3.00e-88	317.00
IUUC-Oan-073458	Ornithorhynchus anatinus	84.58	1.00e-97	348.00
IUUC-Ocu-074189	Oryctolagus cuniculus	87.53	5.00e-143	500.00
IUUC-Obr-076491	Oryza brachyantha	37.10	2.00e-09	56.60
IUUC-Opu-084009	Oryza punctata	38.00	7.00e-09	53.90
IUUC-Ola-086995	Oryzias latipes	68.44	3.00e-88	317.00
IUUC-Oga-088747	Otolemur garnettii	95.45	2.00e-140	491.00
IUUC-Oar-090370	Ovis aries	98.31	1.00e-94	338.00
IUUC-Ptr-091675	Pan troglodytes	85.39	5.00e-136	477.00
IUUC-Pan-092898	Papio anubis	78.11	4.00e-138	484.00
IUUC-Psi-093400	Pelodiscus sinensis	93.27	3.00e-126	443.00
IUUC-Pfo-097096	Poecilia formosa	70.46	2.00e-85	308.00
IUUC-Pab-098715	Pongo abelii	80.45	4.00e-132	464.00
IUUC-Sha-107351	Sarcophilus harrisii	97.66	1.00e-89	321.00
IUUC-Ssl-108455	Sclerotinia sclerotiorum	29.55	7.00e-07	48.10
IUUC-Sar-113347	Sorex araneus	96.08	2.00e-77	280.00
IUUC-Tgu-116459	Taeniopygia guttata	91.06	2.00e-130	458.00
IUUC-Tru-118083	Takifugu rubripes	67.80	2.00e-83	301.00
IUUC-Tsy-119273	Tarsius syrichta	96.28	3.00e-130	457.00
IUUC-Tae-123878	Triticum aestivum	36.00	3.00e-09	55.80
IUUC-Tbe-127966	Tupaia belangeri	97.65	9.00e-89	318.00
IUUC-Ttr-128836	Tursiops truncatus	97.45	6.00e-130	456.00
IUUC-Vpa-130196	Vicugna pacos	97.87	3.00e-130	457.00
IUUC-Xtr-132468	Xenopus tropicalis	84.44	9.00e-110	389.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence