iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048220

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01061453

Gene Name

TRIM13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000024506.1	ENSSTOT00000021439.1	ENSSTOP00000016425.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-08	34.4	10	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C+iC++ f+d p+vlpC H f+++Cl+ +    +  +      f+CP+Cr
   Q: 10   CPICCSLFDD-PRVLPCSHNFCKKCLEGLlegnVRNSLWRPSPFKCPTCR 58
           ********99.**************96666666666666999999****8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MELLEEDLTC PICCSLFDDP RVLPCSHNFC KKCLEGLLEG NVRNSLWRPS PFKCPTCRKE 60
TSATGVNSLQ VNYSLKGIVE KYNKIKVSPK MPVCKGHLGQ PLNIFCLTDM QLICGICATR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCTGC TTGAAGAAGA TCTCACGTGT CCAATTTGTT GCAGTCTGTT TGATGATCCT 60
CGAGTTTTGC CTTGTTCACA CAACTTCTGC AAAAAATGCT TAGAAGGTCT CTTAGAGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0016021--C:integral component of membrane
GO:0097038--C:perinuclear endoplasmic reticulum
GO:0004871--F:signal transducer activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045087--P:innate immune response
GO:1902187--P:negative regulation of viral release from host cell
GO:0032897--P:negative regulation of viral transcription
GO:0010942--P:positive regulation of cell death
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0016239--P:positive regulation of macroautophagy
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0051865--P:protein autoubiquitination
GO:0010332--P:response to gamma radiation
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002269	Ailuropoda melanoleuca	91.95	0.00e+00	729.00
IUUC-Apl-004168	Anas platyrhynchos	76.40	0.00e+00	628.00
IUUC-Aca-004395	Anolis carolinensis	70.56	1.00e-165	575.00
IUUC-Ame-011325	Astyanax mexicanus	46.44	8.00e-68	250.00
IUUC-Bta-012613	Bos taurus	90.98	0.00e+00	731.00
IUUC-Cja-018856	Callithrix jacchus	91.22	0.00e+00	754.00
IUUC-Cfa-021019	Canis familiaris	91.22	0.00e+00	728.00
IUUC-Cpo-021845	Cavia porcellus	90.24	0.00e+00	722.00
IUUC-Csa-023380	Chlorocebus sabaeus	90.49	0.00e+00	728.00
IUUC-Cho-024733	Choloepus hoffmanni	81.25	3.00e-88	318.00
IUUC-Dre-028675	Danio rerio	60.54	5.00e-110	390.00
IUUC-Dno-030018	Dasypus novemcinctus	89.78	0.00e+00	721.00
IUUC-Dor-030599	Dipodomys ordii	88.52	3.00e-125	440.00
IUUC-Ete-033134	Echinops telfairi	87.59	0.00e+00	720.00
IUUC-Eca-033931	Equus caballus	92.20	0.00e+00	729.00
IUUC-Eeu-034903	Erinaceus europaeus	91.71	0.00e+00	728.00
IUUC-Fca-035642	Felis catus	90.49	0.00e+00	716.00
IUUC-Fal-037108	Ficedula albicollis	77.62	0.00e+00	635.00
IUUC-Gga-040903	Gallus gallus	75.68	6.00e-176	609.00
IUUC-Ggo-044635	Gorilla gorilla	90.98	0.00e+00	730.00
IUUC-Hsa-046345	Homo sapiens	90.98	0.00e+00	729.00
IUUC-Lch-050599	Latimeria chalumnae	60.25	5.00e-136	477.00
IUUC-Loc-052378	Lepisosteus oculatus	63.40	1.00e-117	416.00
IUUC-Laf-053332	Loxodonta africana	91.00	0.00e+00	724.00
IUUC-Mcc-054705	Macaca mulatta	90.98	0.00e+00	730.00
IUUC-Meu-056825	Macropus eugenii	82.24	0.00e+00	681.00
IUUC-Mga-059528	Meleagris gallopavo	75.43	1.00e-180	625.00
IUUC-Mmr-060688	Microcebus murinus	92.44	0.00e+00	733.00
IUUC-Mdo-061882	Monodelphis domestica	81.51	0.00e+00	684.00
IUUC-Mmu-064352	Mus musculus	88.05	0.00e+00	728.00
IUUC-Mpu-066712	Mustela putorius furo	91.62	0.00e+00	676.00
IUUC-Mlu-068093	Myotis lucifugus	89.76	0.00e+00	714.00
IUUC-Nle-069310	Nomascus leucogenys	90.73	0.00e+00	726.00
IUUC-Ont-071759	Oreochromis niloticus	60.26	8.00e-112	396.00
IUUC-Oan-073673	Ornithorhynchus anatinus	78.10	0.00e+00	660.00
IUUC-Ocu-074192	Oryctolagus cuniculus	92.20	0.00e+00	736.00
IUUC-Ola-087424	Oryzias latipes	59.93	4.00e-110	391.00
IUUC-Oga-088808	Otolemur garnettii	91.71	0.00e+00	736.00
IUUC-Oar-089553	Ovis aries	90.49	0.00e+00	729.00
IUUC-Ptr-090518	Pan troglodytes	90.73	0.00e+00	726.00
IUUC-Pan-092781	Papio anubis	90.73	0.00e+00	729.00
IUUC-Psi-093914	Pelodiscus sinensis	75.73	2.00e-179	621.00
IUUC-Pfo-096346	Poecilia formosa	58.41	3.00e-109	388.00
IUUC-Pca-100914	Procavia capensis	88.32	0.00e+00	733.00
IUUC-Pva-102728	Pteropus vampyrus	90.24	0.00e+00	722.00
IUUC-Rno-105922	Rattus norvegicus	87.56	0.00e+00	679.00
IUUC-Sha-107124	Sarcophilus harrisii	82.00	0.00e+00	691.00
IUUC-Sar-113607	Sorex araneus	88.05	0.00e+00	696.00
IUUC-Ssc-116355	Sus scrofa	92.44	0.00e+00	736.00
IUUC-Tgu-116476	Taeniopygia guttata	77.13	0.00e+00	632.00
IUUC-Tru-118737	Takifugu rubripes	60.26	1.00e-112	399.00
IUUC-Tsy-118908	Tarsius syrichta	92.44	0.00e+00	738.00
IUUC-Tbe-127258	Tupaia belangeri	93.41	0.00e+00	744.00
IUUC-Vpa-130138	Vicugna pacos	90.98	0.00e+00	732.00
IUUC-Xtr-132100	Xenopus tropicalis	59.61	6.00e-134	470.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence