iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049536

Ensembl Protein ID

ENSLACP00000018643.1

UniProt Accession

H3B9S2; H3B9S2_LATCH

Genbank Protein ID

ENSLACP00000018643

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01057137

Gene Name

RNF183

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000016417.1	ENSLACT00000018776.1	ENSLACP00000018643.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-08	34.5	13	63

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           CaiC++++   ++ p+ l C+H f+++Cl ++    +    ++ ++  CPlCr
   Q: 13   CAICWSRYdntFRTPKQLECQHSFCLECLARMslaaV--AEQTAGRLPCPLCR 63
           ********44433355666**********88888444..55599********8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

TAEEGAREPE ADCAICWSRY DNTFRTPKQL ECQHSFCLEC LARMSLAAVA EQTAGRLPCP 60
LCRHPTVLDT GQLITDLPTN SSILNQLKLE PNHIILEDGR LYYKDSQKSR FFLRQPTIYT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGGCAGAGG AAGGGGCCCG GGAACCCGAG GCCGACTGTG CAATCTGCTG GAGTCGGTAT 60
GACAACACCT TCCGCACCCC CAAGCAGCTG GAATGTCAGC ACTCCTTCTG CTTGGAGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Csa-023128	Chlorocebus sabaeus	49.74	1.00e-50	192.00
IUUC-Dno-029116	Dasypus novemcinctus	49.22	2.00e-49	187.00
IUUC-Dor-031130	Dipodomys ordii	48.02	2.00e-38	151.00
IUUC-Eca-033747	Equus caballus	50.78	8.00e-54	202.00
IUUC-Fal-037610	Ficedula albicollis	40.51	3.00e-10	57.80
IUUC-Itr-048513	Ictidomys tridecemlineatus	49.50	1.00e-49	189.00
IUUC-Loc-052136	Lepisosteus oculatus	50.27	8.00e-41	159.00
IUUC-Mcc-054897	Macaca mulatta	49.74	1.00e-50	192.00
IUUC-Meu-056717	Macropus eugenii	50.00	2.00e-47	181.00
IUUC-Mmr-061396	Microcebus murinus	48.70	3.00e-47	181.00
IUUC-Mdo-062101	Monodelphis domestica	52.63	1.00e-51	195.00
IUUC-Ocu-074595	Oryctolagus cuniculus	47.21	1.00e-38	152.00
IUUC-Osa-086244	Oryza sativa	43.06	1.00e-09	57.40
IUUC-Oga-089178	Otolemur garnettii	49.74	4.00e-43	167.00
IUUC-Pan-092010	Papio anubis	50.00	2.00e-50	191.00
IUUC-Psi-093722	Pelodiscus sinensis	37.57	2.00e-27	114.00
IUUC-Sha-106674	Sarcophilus harrisii	47.37	4.00e-43	167.00
IUUC-Sar-113158	Sorex araneus	51.28	7.00e-46	176.00
IUUC-Ssc-115834	Sus scrofa	47.67	4.00e-42	164.00
IUUC-Tbe-128022	Tupaia belangeri	51.92	6.00e-24	102.00
IUUC-Ttr-128432	Tursiops truncatus	46.00	1.00e-37	149.00
IUUC-Vpa-130551	Vicugna pacos	48.70	1.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence