iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052136

Ensembl Protein ID

ENSLOCP00000021436.1

UniProt Accession

W5NLC7; W5NLC7_LEPOC

Genbank Protein ID

ENSLOCP00000021436

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01021879

Gene Name

RNF183

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000017331.1	ENSLOCT00000021473.1	ENSLOCP00000021436.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-08	33.3	12	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           CaiC+++f   ++ p++l C H+f+++Cl ++   +++    ++  +CPlCr
   Q: 12   CAICWSPFdnaFRTPKLLACHHAFCLECLARLslaMDPE--PQGGLSCPLCR 61
           ********66655588899**********8887554444..889999****8 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MAEEPPPPQL DCAICWSPFD NAFRTPKLLA CHHAFCLECL ARLSLAMDPE PQGGLSCPLC 60
RRLTPLHDAQ SIAELPTDQA LLDRLRLEAR PVALEDGRLW YRAAPARSWL RRSRPTVYTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGAGG AGCCCCCCCC GCCCCAGCTG GACTGTGCCA TCTGCTGGAG CCCCTTCGAC 60
AACGCCTTCC GGACGCCCAA GCTGCTGGCG TGCCACCACG CCTTCTGCCT GGAGTGCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010644	Astyanax mexicanus	45.45	9.00e-17	79.70
IUUC-Cja-019712	Callithrix jacchus	51.95	1.00e-13	70.10
IUUC-Cfa-020515	Canis familiaris	50.65	2.00e-13	69.30
IUUC-Csa-023128	Chlorocebus sabaeus	39.23	2.00e-25	108.00
IUUC-Dre-028812	Danio rerio	33.58	2.00e-17	82.80
IUUC-Dno-029116	Dasypus novemcinctus	38.02	2.00e-25	108.00
IUUC-Dor-031130	Dipodomys ordii	38.25	3.00e-19	87.80
IUUC-Eca-033747	Equus caballus	40.21	3.00e-29	121.00
IUUC-Fca-036424	Felis catus	56.36	1.00e-11	60.80
IUUC-Gmo-038633	Gadus morhua	38.89	2.00e-14	70.10
IUUC-Ggo-045542	Gorilla gorilla	54.39	4.00e-11	61.20
IUUC-Hsa-046242	Homo sapiens	48.78	5.00e-13	68.20
IUUC-Itr-048513	Ictidomys tridecemlineatus	37.50	3.00e-25	108.00
IUUC-Lch-049536	Latimeria chalumnae	50.27	8.00e-41	159.00
IUUC-Mcc-054897	Macaca mulatta	39.23	1.00e-25	108.00
IUUC-Meu-056717	Macropus eugenii	40.00	7.00e-25	106.00
IUUC-Mga-060186	Meleagris gallopavo	51.52	3.00e-14	71.60
IUUC-Mmr-061396	Microcebus murinus	38.12	4.00e-24	104.00
IUUC-Mdo-062101	Monodelphis domestica	42.93	3.00e-25	107.00
IUUC-Mmu-063087	Mus musculus	49.40	1.00e-13	70.90
IUUC-Nle-069438	Nomascus leucogenys	48.78	5.00e-13	68.20
IUUC-Ocu-074595	Oryctolagus cuniculus	38.14	4.00e-18	84.00
IUUC-Ola-086363	Oryzias latipes	40.48	3.00e-14	70.90
IUUC-Oga-089178	Otolemur garnettii	38.89	5.00e-24	103.00
IUUC-Pan-092010	Papio anubis	39.34	2.00e-25	108.00
IUUC-Psi-093722	Pelodiscus sinensis	51.06	9.00e-21	92.00
IUUC-Pfo-097287	Poecilia formosa	47.50	7.00e-16	77.80
IUUC-Pab-098138	Pongo abelii	48.15	2.00e-12	66.60
IUUC-Rno-105774	Rattus norvegicus	50.00	3.00e-13	69.30
IUUC-Sha-106674	Sarcophilus harrisii	38.34	3.00e-22	97.80
IUUC-Sar-113158	Sorex araneus	39.78	1.00e-24	106.00
IUUC-Ssc-115834	Sus scrofa	39.23	4.00e-23	100.00
IUUC-Tru-118029	Takifugu rubripes	44.05	2.00e-15	76.60
IUUC-Tni-120086	Tetraodon nigroviridis	37.33	1.00e-16	80.50
IUUC-Tbe-128022	Tupaia belangeri	45.26	2.00e-15	73.60
IUUC-Ttr-128432	Tursiops truncatus	38.85	1.00e-19	89.40
IUUC-Vpa-130551	Vicugna pacos	38.12	2.00e-23	102.00
IUUC-Xtr-132792	Xenopus tropicalis	33.87	8.00e-21	93.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence