iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Fca-036021

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AANG02024760

Gene Name

RNF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFCAG00000010281.3	ENSFCAT00000010284.3	ENSFCAP00000009544.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-09	36.8	240	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 240  CAICLDEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 282
           ********66666******************.....899********7 PP

Organism

Felis catus

Protein Sequence
(Fasta)

MLLSIGMLML SATQVYTILT VQLFAFLNLL PVEADILAYN FENASQTFDD LPARFGYRLP 60
AEGLKGFLIN SKPENACEPI VPPPLKDNSS GTFIVLIRRL DCNFDVKVLN AQRAGYKAAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGACCTCGTT TTTACAGATG ACGAATCAAA GCTCCAAAGA TCACATAAGC CAGAGACACA 60
GCTGGAATGA GAGGGTCAGA TCCCTTGACG ACCTGCTCCA AAGCCCATCA TTCTACACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0005765--C:lysosomal membrane
GO:0005654--C:nucleoplasm
GO:0008270--F:zinc ion binding

KEGG

fca:101098482

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000889	Aegilops tauschii	28.41	8.00e-18	85.10
IUUC-Aml-001909	Ailuropoda melanoleuca	98.95	0.00e+00	654.00
IUUC-Atr-003055	Amborella trichopoda	31.80	8.00e-32	131.00
IUUC-Apl-004022	Anas platyrhynchos	91.86	1.00e-174	605.00
IUUC-Aca-004641	Anolis carolinensis	88.54	8.00e-170	589.00
IUUC-Aly-006519	Arabidopsis lyrata	33.07	8.00e-33	134.00
IUUC-Ani-009337	Aspergillus nidulans	46.30	4.00e-13	67.80
IUUC-Ame-010635	Astyanax mexicanus	72.22	7.00e-141	493.00
IUUC-Bta-012593	Bos taurus	97.64	0.00e+00	690.00
IUUC-Bci-013936	Botrytis cinerea	35.14	4.00e-13	69.30
IUUC-Bdi-014479	Brachypodium distachyon	32.81	7.00e-28	117.00
IUUC-Bol-015396	Brassica oleracea	31.47	1.00e-22	100.00
IUUC-Bra-017689	Brassica rapa	33.10	2.00e-33	136.00
IUUC-Cel-018181	Caenorhabditis elegans	31.72	1.00e-28	120.00
IUUC-Cja-019353	Callithrix jacchus	96.59	0.00e+00	638.00
IUUC-Cfa-020234	Canis familiaris	98.69	0.00e+00	653.00
IUUC-Cpo-021602	Cavia porcellus	95.04	1.00e-158	552.00
IUUC-Cre-022983	Chlamydomonas reinhardtii	37.93	1.00e-10	61.20
IUUC-Csa-023201	Chlorocebus sabaeus	97.11	0.00e+00	641.00
IUUC-Cho-024954	Choloepus hoffmanni	81.89	5.00e-149	520.00
IUUC-Cin-025554	Ciona intestinalis	42.81	7.00e-62	230.00
IUUC-Csv-025959	Ciona savignyi	43.68	7.00e-52	197.00
IUUC-Dre-028744	Danio rerio	77.23	9.00e-137	479.00
IUUC-Dno-029675	Dasypus novemcinctus	96.85	0.00e+00	640.00
IUUC-Dor-030791	Dipodomys ordii	79.00	2.00e-136	478.00
IUUC-Dse-031406	Dothistroma septosporum	43.33	2.00e-12	68.20
IUUC-Dme-031765	Drosophila melanogaster	40.43	1.00e-51	197.00
IUUC-Ete-032577	Echinops telfairi	86.79	2.00e-140	491.00
IUUC-Eca-034148	Equus caballus	97.64	0.00e+00	642.00
IUUC-Eeu-034552	Erinaceus europaeus	95.28	9.00e-179	619.00
IUUC-Fal-037621	Ficedula albicollis	91.08	5.00e-172	596.00
IUUC-Gmo-039485	Gadus morhua	78.05	9.00e-135	473.00
IUUC-Gga-041166	Gallus gallus	91.60	3.00e-175	607.00
IUUC-Gac-042124	Gasterosteus aculeatus	76.25	1.00e-129	455.00
IUUC-Ggo-045344	Gorilla gorilla	97.38	0.00e+00	642.00
IUUC-Hsa-045960	Homo sapiens	97.38	0.00e+00	642.00
IUUC-Hvu-047136	Hordeum vulgare	33.73	3.00e-28	119.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	95.54	0.00e+00	633.00
IUUC-Lch-050635	Latimeria chalumnae	82.81	2.00e-135	474.00
IUUC-Lpe-051192	Leersia perrieri	34.39	2.00e-29	123.00
IUUC-Loc-052869	Lepisosteus oculatus	79.82	3.00e-141	494.00
IUUC-Laf-054477	Loxodonta africana	95.54	0.00e+00	635.00
IUUC-Mcc-055232	Macaca mulatta	97.11	0.00e+00	641.00
IUUC-Meu-056237	Macropus eugenii	83.46	8.00e-118	416.00
IUUC-Mpo-057522	Magnaporthe poae	44.44	3.00e-13	69.70
IUUC-Mtr-058129	Medicago truncatula	32.81	2.00e-28	120.00
IUUC-Mla-059171	Melampsora laricipopulina	42.59	2.00e-10	60.80
IUUC-Mga-059780	Meleagris gallopavo	91.60	5.00e-175	606.00
IUUC-Mvi-060468	Microbotryum violaceum	46.00	4.00e-12	66.60
IUUC-Mmr-061384	Microcebus murinus	97.30	1.00e-179	621.00
IUUC-Mdo-062781	Monodelphis domestica	92.93	1.00e-179	622.00
IUUC-Mmu-063727	Mus musculus	94.23	1.00e-173	602.00
IUUC-Mac-065216	Musa acuminata	32.57	8.00e-30	124.00
IUUC-Mpu-066497	Mustela putorius furo	99.48	0.00e+00	654.00
IUUC-Mlu-067654	Myotis lucifugus	95.71	7.00e-116	409.00
IUUC-Nle-069368	Nomascus leucogenys	97.38	0.00e+00	642.00
IUUC-Opr-070934	Ochotona princeps	68.50	5.00e-111	394.00
IUUC-Ont-071868	Oreochromis niloticus	75.86	4.00e-129	454.00
IUUC-Oan-072733	Ornithorhynchus anatinus	88.61	6.00e-106	376.00
IUUC-Ocu-074083	Oryctolagus cuniculus	96.59	0.00e+00	639.00
IUUC-Oba-075841	Oryza barthii	33.33	2.00e-27	117.00
IUUC-Obr-076703	Oryza brachyantha	34.75	2.00e-30	127.00
IUUC-Ogl-077861	Oryza glaberrima	35.57	2.00e-30	127.00
IUUC-Ogu-078205	Oryza glumaepatula	34.78	1.00e-28	120.00
IUUC-Olo-081024	Oryza longistaminata	35.18	1.00e-29	125.00
IUUC-Ome-081844	Oryza meridionalis	35.57	2.00e-30	126.00
IUUC-Oni-082382	Oryza nivara	32.81	3.00e-30	126.00
IUUC-Opu-083162	Oryza punctata	34.39	1.00e-30	127.00
IUUC-Oru-085122	Oryza rufipogon	33.23	3.00e-28	119.00
IUUC-Osa-086175	Oryza sativa	35.57	1.00e-30	127.00
IUUC-Ola-086440	Oryzias latipes	75.00	1.00e-116	412.00
IUUC-Oga-088291	Otolemur garnettii	92.72	2.00e-168	585.00
IUUC-Oar-089911	Ovis aries	97.38	0.00e+00	689.00
IUUC-Ptr-091166	Pan troglodytes	97.38	0.00e+00	642.00
IUUC-Pan-092154	Papio anubis	97.11	0.00e+00	641.00
IUUC-Psi-093062	Pelodiscus sinensis	92.39	1.00e-170	592.00
IUUC-Pma-094545	Petromyzon marinus	73.21	6.00e-26	108.00
IUUC-Ppa-095928	Physcomitrella patens	34.85	2.00e-31	129.00
IUUC-Pfo-097232	Poecilia formosa	77.74	1.00e-132	466.00
IUUC-Pab-097909	Pongo abelii	97.11	0.00e+00	644.00
IUUC-Pca-100724	Procavia capensis	80.49	6.00e-140	490.00
IUUC-Pva-102624	Pteropus vampyrus	91.60	5.00e-166	577.00
IUUC-Ptt-103943	Puccinia triticina	44.44	8.00e-11	62.00
IUUC-Rno-105109	Rattus norvegicus	92.13	6.00e-166	576.00
IUUC-Sha-107563	Sarcophilus harrisii	92.93	3.00e-175	607.00
IUUC-Spo-108083	Schizosaccharomyces pombe	26.09	2.00e-14	73.20
IUUC-Ssl-108601	Sclerotinia sclerotiorum	41.07	6.00e-13	68.60
IUUC-Smo-109274	Selaginella moellendorffii	35.83	2.00e-32	132.00
IUUC-Sit-110628	Setaria italica	33.33	9.00e-31	128.00
IUUC-Sly-110842	Solanum lycopersicum	29.39	4.00e-28	119.00
IUUC-Ssc-116043	Sus scrofa	97.90	0.00e+00	644.00
IUUC-Tgu-116908	Taeniopygia guttata	91.10	1.00e-172	598.00
IUUC-Tru-118219	Takifugu rubripes	76.42	1.00e-132	465.00
IUUC-Tsy-119333	Tarsius syrichta	97.90	0.00e+00	639.00
IUUC-Tni-120332	Tetraodon nigroviridis	71.89	5.00e-89	320.00
IUUC-Tae-125320	Triticum aestivum	31.16	2.00e-29	122.00
IUUC-Tur-126455	Triticum urartu	32.25	1.00e-26	114.00
IUUC-Tme-126894	Tuber melanosporum	40.79	3.00e-13	70.10
IUUC-Tbe-127859	Tupaia belangeri	86.05	3.00e-167	580.00
IUUC-Ttr-129219	Tursiops truncatus	87.66	1.00e-157	549.00
IUUC-Vda-129899	Verticillium dahliae	43.40	6.00e-13	68.90
IUUC-Vpa-130314	Vicugna pacos	94.75	5.00e-175	606.00
IUUC-Vvi-131355	Vitis vinifera	33.08	8.00e-29	121.00
IUUC-Xtr-132114	Xenopus tropicalis	77.50	8.00e-134	469.00
IUUC-Xma-133474	Xiphophorus maculatus	77.74	9.00e-133	466.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence