iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114522

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G279900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g034040	Sb06g034040.1	Sb06g034040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.60e-07	30.0	232	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl d+   ++ ++vlpC H fha C+  w     ++s +  CP+C+
   Q: 232  CAICLADYnvgEK-LRVLPCRHKFHAACVDLW-----LTSWRTFCPICK 274
           ********99555.******************.....5555666****6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKSSRFLFLC AMFCLMARLG AANVVLMGNN LTLSFDDIEA SFSPGVKGSG VSGVVYASEP 60
LNACSPLTIK TVNGPPSPFA LIIRGGCTFD EKVKNAQDAG FKAAIVYDNK NSGVLVSMAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTCTCTCC TCAGTCCTCC CCCTGGTTTG CCTGCCCTGT CTTGCCCAGT TGCCCAGTTG 60
CCCCTGTCGG AATCAGTCCA GGTTCAGGTC GGCAGTGGGC AGTGGTTCAG GTCGAGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_06g034040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001617	Ailuropoda melanoleuca	31.59	2.00e-31	128.00
IUUC-Aca-004641	Anolis carolinensis	34.04	3.00e-33	135.00
IUUC-Bta-012593	Bos taurus	33.02	4.00e-34	137.00
IUUC-Cja-019353	Callithrix jacchus	33.02	5.00e-33	134.00
IUUC-Cpo-021602	Cavia porcellus	34.14	3.00e-32	131.00
IUUC-Csv-025959	Ciona savignyi	35.63	8.00e-30	124.00
IUUC-Dor-030128	Dipodomys ordii	34.52	9.00e-28	116.00
IUUC-Loc-051914	Lepisosteus oculatus	32.46	2.00e-30	125.00
IUUC-Laf-053687	Loxodonta africana	33.23	2.00e-30	125.00
IUUC-Meu-056408	Macropus eugenii	37.13	6.00e-28	117.00
IUUC-Mdo-062795	Monodelphis domestica	36.02	2.00e-32	132.00
IUUC-Mmu-063722	Mus musculus	33.97	1.00e-34	139.00
IUUC-Mlu-067350	Myotis lucifugus	34.34	2.00e-28	118.00
IUUC-Opr-070767	Ochotona princeps	28.94	1.00e-21	96.30
IUUC-Oga-089169	Otolemur garnettii	33.86	2.00e-33	135.00
IUUC-Oar-089911	Ovis aries	33.02	5.00e-34	137.00
IUUC-Psi-093038	Pelodiscus sinensis	31.83	2.00e-33	135.00
IUUC-Ppa-095421	Physcomitrella patens	51.23	3.00e-81	294.00
IUUC-Pca-100609	Procavia capensis	33.12	1.00e-27	116.00
IUUC-Pva-102834	Pteropus vampyrus	32.48	1.00e-30	125.00
IUUC-Pgr-103263	Puccinia graminis	28.74	1.00e-12	67.40
IUUC-Sha-106787	Sarcophilus harrisii	36.02	3.00e-32	131.00
IUUC-Ssc-116043	Sus scrofa	33.02	2.00e-33	135.00
IUUC-Tni-120357	Tetraodon nigroviridis	32.35	7.00e-27	113.00
IUUC-Tbe-127812	Tupaia belangeri	37.29	9.00e-28	116.00
IUUC-Ttr-128409	Tursiops truncatus	37.29	2.00e-27	115.00
IUUC-Uma-129559	Ustilago maydis	53.06	7.00e-12	65.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence