iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058227

Ensembl Protein ID

AET01903

UniProt Accession

G7L949; G7L949_MEDTR

Genbank Protein ID

AET01903.1

Protein Name

C6HC-type zinc finger RING/U-box protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g022900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g022900	AET01903	AET01903

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-06	27.7	63	108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCle..dfkdgplvlp.CgHvfhadClqkw.pglknssskefrCP 43
           C iC+e  ++++  +  + C H f++dC+ ++   + ++++ +++CP
   Q: 63   CGICMEnkPIEK-MFKSRnCSHSFCEDCVARFlAVKIQEKKATIKCP 108
           99**99655566.665556*********8666544667789999999 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MEIGKFLSKD LVGHSLSFLL VWTLISRALK QAQKEILKQE QEEPLILRAF KQAQKKISQL 60
KPCGICMENK PIEKMFKSRN CSHSFCEDCV ARFLAVKIQE KKATIKCPDP NCNSNFDTQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAATTG GCAAGTTCCT TTCCAAAGAC CTAGTTGGCC ATTCTCTATC ATTTCTCTTG 60
GTATGGACAC TAATTTCGAG AGCACTCAAA CAAGCACAGA AAGAGATACT AAAACAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF01485--IBR
PF13445--zf-RING_UBOX

SMART

SM00647--IBR

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_8g022900

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000190	Aegilops tauschii	42.33	1.00e-47	182.00
IUUC-Atr-002709	Amborella trichopoda	47.57	6.00e-52	198.00
IUUC-Apl-004112	Anas platyrhynchos	26.72	1.00e-15	76.30
IUUC-Cel-018626	Caenorhabditis elegans	26.39	1.00e-14	75.10
IUUC-Cja-019367	Callithrix jacchus	26.67	9.00e-18	83.60
IUUC-Csa-023174	Chlorocebus sabaeus	26.67	1.00e-17	83.20
IUUC-Dno-029150	Dasypus novemcinctus	26.67	2.00e-17	82.40
IUUC-Eca-034129	Equus caballus	27.14	1.00e-17	83.20
IUUC-Fal-037155	Ficedula albicollis	29.05	4.00e-21	94.70
IUUC-Gga-041198	Gallus gallus	28.10	3.00e-20	92.40
IUUC-Gac-041506	Gasterosteus aculeatus	24.52	2.00e-15	75.90
IUUC-Hvu-047484	Hordeum vulgare	44.81	8.00e-51	193.00
IUUC-Itr-048257	Ictidomys tridecemlineatus	24.32	1.00e-13	71.20
IUUC-Lpe-051649	Leersia perrieri	44.60	8.00e-47	181.00
IUUC-Meu-056354	Macropus eugenii	23.85	5.00e-14	73.20
IUUC-Mdo-062999	Monodelphis domestica	28.10	1.00e-18	87.40
IUUC-Mac-065414	Musa acuminata	44.60	2.00e-51	195.00
IUUC-Mpu-065973	Mustela putorius furo	28.11	3.00e-19	88.60
IUUC-Nle-069289	Nomascus leucogenys	26.67	8.00e-18	83.60
IUUC-Ont-072164	Oreochromis niloticus	24.88	2.00e-18	85.50
IUUC-Oan-072980	Ornithorhynchus anatinus	26.89	9.00e-18	83.60
IUUC-Ocu-074266	Oryctolagus cuniculus	26.67	2.00e-17	82.00
IUUC-Ogu-078368	Oryza glumaepatula	48.51	1.00e-47	183.00
IUUC-Opu-083215	Oryza punctata	47.52	1.00e-54	206.00
IUUC-Pan-091768	Papio anubis	26.67	1.00e-17	83.20
IUUC-Psi-093567	Pelodiscus sinensis	28.57	6.00e-21	94.40
IUUC-Pfo-096655	Poecilia formosa	24.64	1.00e-18	87.40
IUUC-Pop-099816	Populus trichocarpa	43.04	3.00e-57	214.00
IUUC-Stu-112736	Solanum tuberosum	51.17	6.00e-57	213.00
IUUC-Sbi-114532	Sorghum bicolor	48.11	3.00e-55	208.00
IUUC-Tae-124420	Triticum aestivum	45.28	2.00e-51	196.00
IUUC-Tur-126368	Triticum urartu	42.99	2.00e-47	182.00
IUUC-Vvi-130951	Vitis vinifera	43.83	6.00e-47	180.00
IUUC-Xtr-132796	Xenopus tropicalis	28.23	2.00e-20	93.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence