iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134520

Ensembl Protein ID

CAG81637

UniProt Accession

Q6CDC4; Q6CDC4_YARLI

Genbank Protein ID

CAG81637.1

Protein Name

YALI0C01738p

Genbank Nucleotide ID

CR382129

Gene Name

YALI0_C01738g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_C01738g	CAG81637	CAG81637

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-16	55.9	321	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtllvsGsdDgtikvWDlr 31
           sv +l++  s +ll++G+  g+i+++D+ 
   Q: 321  SVEALSWckSMKLLAAGTTSGQIMLYDTN 349
           68999***766****************75 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

MSVNNHLGDQ IDAQASHDQD NQNDIYIDES EIADVVPDSN EPEPEEDDDD MEGLDEGMED 60
DGEQGEGEER IEVDMRNNAV AWFDKHEDSV FRVIAHPSVP LVVSGGGDNC GYMWTSNSNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTGTAA ACAACCATCT AGGAGACCAG ATCGACGCGC AGGCATCGCA CGACCAGGAT 60
AACCAGAACG ACATCTACAT TGACGAATCT GAAATCGCCG ATGTTGTTCC CGATTCCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0022626--C:cytosolic ribosome
GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0000027--P:ribosomal large subunit assembly
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

yli:YALI0C01738g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001781	Ailuropoda melanoleuca	29.26	1.00e-27	115.00
IUUC-Apl-003939	Anas platyrhynchos	23.96	4.00e-08	50.10
IUUC-Aca-004594	Anolis carolinensis	28.41	8.00e-28	115.00
IUUC-Ago-007790	Ashbya gossypii	39.63	1.00e-70	258.00
IUUC-Acl-008079	Aspergillus clavatus	30.77	2.00e-19	88.60
IUUC-Afl-008588	Aspergillus flavus	27.09	5.00e-27	113.00
IUUC-Afu-009093	Aspergillus fumigatus	30.60	2.00e-20	91.30
IUUC-Ani-009179	Aspergillus nidulans	28.93	1.00e-22	99.00
IUUC-Aor-010024	Aspergillus oryzae	27.09	5.00e-27	113.00
IUUC-Ate-010448	Aspergillus terreus	26.90	9.00e-30	122.00
IUUC-Ame-011651	Astyanax mexicanus	25.07	1.00e-22	98.60
IUUC-Bgr-012118	Blumeria graminis	27.63	2.00e-31	128.00
IUUC-Bta-012833	Bos taurus	29.55	8.00e-27	112.00
IUUC-Bci-013724	Botrytis cinerea	32.24	2.00e-20	92.00
IUUC-Cel-018305	Caenorhabditis elegans	24.37	1.00e-18	85.10
IUUC-Cja-019433	Callithrix jacchus	28.69	9.00e-27	112.00
IUUC-Cfa-020093	Canis familiaris	28.69	1.00e-27	115.00
IUUC-Cpo-021742	Cavia porcellus	28.69	7.00e-27	112.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	24.46	4.00e-21	94.00
IUUC-Csa-023608	Chlorocebus sabaeus	29.25	1.00e-27	115.00
IUUC-Cho-024628	Choloepus hoffmanni	28.37	4.00e-18	83.60
IUUC-Cin-025244	Ciona intestinalis	25.07	1.00e-17	81.60
IUUC-Csv-026218	Ciona savignyi	24.86	2.00e-19	87.80
IUUC-Cne-026911	Cryptococcus neoformans	26.38	3.00e-24	104.00
IUUC-Dre-028528	Danio rerio	25.92	4.00e-27	113.00
IUUC-Dno-029297	Dasypus novemcinctus	28.41	2.00e-26	111.00
IUUC-Dse-031205	Dothistroma septosporum	23.67	4.00e-22	97.40
IUUC-Dme-031587	Drosophila melanogaster	23.69	4.00e-18	83.60
IUUC-Ete-033100	Echinops telfairi	26.94	4.00e-14	70.10
IUUC-Eca-034277	Equus caballus	28.69	6.00e-27	112.00
IUUC-Fca-036115	Felis catus	28.41	2.00e-27	114.00
IUUC-Fal-036864	Ficedula albicollis	29.92	6.00e-31	126.00
IUUC-Fox-037970	Fusarium oxysporum	25.59	6.00e-23	99.80
IUUC-Fso-038432	Fusarium solani	25.16	3.00e-21	94.40
IUUC-Ggr-040066	Gaeumannomyces graminis	27.08	2.00e-22	98.60
IUUC-Gga-040545	Gallus gallus	29.55	1.00e-31	128.00
IUUC-Gac-042027	Gasterosteus aculeatus	27.86	8.00e-27	112.00
IUUC-Gma-043676	Glycine max	25.70	7.00e-24	102.00
IUUC-Ggo-045036	Gorilla gorilla	28.69	9.00e-27	112.00
IUUC-Hsa-046749	Homo sapiens	28.69	9.00e-27	112.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	28.98	5.00e-27	113.00
IUUC-Kpa-049147	Komagataella pastoris	44.14	4.00e-87	312.00
IUUC-Lch-049747	Latimeria chalumnae	25.40	5.00e-22	96.70
IUUC-Loc-052406	Lepisosteus oculatus	26.76	4.00e-26	110.00
IUUC-Lma-053153	Leptosphaeria maculans	26.88	2.00e-32	131.00
IUUC-Laf-053901	Loxodonta africana	28.98	3.00e-27	114.00
IUUC-Mcc-054990	Macaca mulatta	28.69	9.00e-27	112.00
IUUC-Meu-056844	Macropus eugenii	27.56	5.00e-27	113.00
IUUC-Mor-056975	Magnaporthe oryzae	25.88	6.00e-23	100.00
IUUC-Mtr-057759	Medicago truncatula	26.00	6.00e-25	106.00
IUUC-Mla-058856	Melampsora laricipopulina	25.47	8.00e-31	125.00
IUUC-Mga-059749	Meleagris gallopavo	29.92	2.00e-30	124.00
IUUC-Mvi-060237	Microbotryum violaceum	28.65	4.00e-29	120.00
IUUC-Mmr-061270	Microcebus murinus	28.27	6.00e-25	106.00
IUUC-Mdo-062965	Monodelphis domestica	27.27	8.00e-27	112.00
IUUC-Mmu-064081	Mus musculus	28.98	8.00e-27	112.00
IUUC-Mpu-066355	Mustela putorius furo	28.69	1.00e-27	115.00
IUUC-Mlu-067630	Myotis lucifugus	27.56	8.00e-27	112.00
IUUC-Nfi-068543	Neosartorya fischeri	31.33	1.00e-20	92.00
IUUC-Ncr-068720	Neurospora crassa	29.69	2.00e-19	88.60
IUUC-Nle-069701	Nomascus leucogenys	28.69	8.00e-27	112.00
IUUC-Opr-070337	Ochotona princeps	28.29	8.00e-22	95.90
IUUC-Ont-072614	Oreochromis niloticus	27.73	4.00e-30	123.00
IUUC-Ocu-073912	Oryctolagus cuniculus	28.69	9.00e-27	112.00
IUUC-Ola-087164	Oryzias latipes	27.17	2.00e-29	120.00
IUUC-Oga-088864	Otolemur garnettii	28.69	7.00e-27	112.00
IUUC-Oar-090115	Ovis aries	29.55	9.00e-27	112.00
IUUC-Ptr-091398	Pan troglodytes	28.69	8.00e-27	112.00
IUUC-Pan-092002	Papio anubis	28.69	9.00e-27	112.00
IUUC-Psi-093979	Pelodiscus sinensis	32.04	3.00e-17	80.10
IUUC-Pma-094618	Petromyzon marinus	27.55	4.00e-26	110.00
IUUC-Pno-095088	Phaeosphaeria nodorum	27.16	3.00e-33	135.00
IUUC-Ppa-095351	Physcomitrella patens	25.77	1.00e-29	122.00
IUUC-Pfo-097078	Poecilia formosa	28.93	4.00e-30	123.00
IUUC-Pab-098540	Pongo abelii	28.69	8.00e-27	112.00
IUUC-Pca-101072	Procavia capensis	28.53	3.00e-25	107.00
IUUC-Pgr-103362	Puccinia graminis	24.80	3.00e-28	117.00
IUUC-Ptt-103756	Puccinia triticina	29.05	1.00e-21	95.10
IUUC-Pte-104401	Pyrenophora teres	26.16	5.00e-29	120.00
IUUC-Pyt-104510	Pyrenophora triticirepentis	25.28	1.00e-25	108.00
IUUC-Rno-105672	Rattus norvegicus	28.98	5.00e-27	113.00
IUUC-Sce-106242	Saccharomyces cerevisiae	39.53	7.00e-67	245.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	28.61	1.00e-34	138.00
IUUC-Spo-108208	Schizosaccharomyces pombe	27.90	2.00e-42	164.00
IUUC-Sre-115029	Sporisorium reilianum	29.90	3.00e-36	144.00
IUUC-Ssc-116045	Sus scrofa	27.68	9.00e-18	82.40
IUUC-Tgu-117514	Taeniopygia guttata	30.47	8.00e-32	129.00
IUUC-Tru-117851	Takifugu rubripes	28.85	4.00e-30	123.00
IUUC-Tsy-119140	Tarsius syrichta	27.16	5.00e-20	90.10
IUUC-Tni-120248	Tetraodon nigroviridis	27.89	5.00e-30	123.00
IUUC-Tre-122058	Trichoderma reesei	26.70	1.00e-26	112.00
IUUC-Tvi-122350	Trichoderma virens	25.88	7.00e-25	106.00
IUUC-Tme-127079	Tuber melanosporum	37.56	5.00e-31	126.00
IUUC-Ttr-128182	Tursiops truncatus	28.12	3.00e-25	107.00
IUUC-Uma-129624	Ustilago maydis	28.44	1.00e-33	135.00
IUUC-Vda-129787	Verticillium dahliae	25.68	2.00e-27	114.00
IUUC-Vpa-130605	Vicugna pacos	25.31	9.00e-15	72.40
IUUC-Xtr-132193	Xenopus tropicalis	28.86	8.00e-30	122.00
IUUC-Xma-133880	Xiphophorus maculatus	28.10	3.00e-29	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence