iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107490

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01121018

Gene Name

UBR4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000009026.1	ENSSHAT00000010552.1	ENSSHAP00000010459.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/N-recognin/UBR-box	92.58	0.00e+00	5698.00	IUUC-Hsa-046955

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

SELEILHHDK QYEPFYSSFV ALSTHYITTV CSLIPRNQLQ SVAAACKVLI EFSLLRLENP 60
DEACAVSQKH LILLIKGLCT GCSRLDRTEI ITFTAMMKSA KLPQTVKTLS DVEDQKELAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGAATTAG AAATCCTGCA CCACGACAAG CAGTATGAGC CCTTCTACTC TTCCTTTGTC 60
GCACTTTCCA CACACTATAT CACAACGGTC TGCAGCCTCA GTAAGTATCC AGCTGCTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR025704--E3_Ub_ligase_UBR4
IPR017986--WD40_repeat_dom
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF13764--E3_UbLigase_R4
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0005813--C:centrosome
GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000915	Aegilops tauschii	33.87	0.00e+00	891.00
IUUC-Aml-001346	Ailuropoda melanoleuca	92.63	0.00e+00	5672.00
IUUC-Atr-002587	Amborella trichopoda	35.13	6.00e-149	523.00
IUUC-Apl-003678	Anas platyrhynchos	93.08	0.00e+00	5747.00
IUUC-Aca-004517	Anolis carolinensis	98.17	0.00e+00	890.00
IUUC-Aly-006117	Arabidopsis lyrata	32.17	0.00e+00	894.00
IUUC-Ath-007289	Arabidopsis thaliana	33.86	0.00e+00	824.00
IUUC-Ame-011965	Astyanax mexicanus	83.09	0.00e+00	4725.00
IUUC-Bta-012498	Bos taurus	91.22	0.00e+00	5547.00
IUUC-Bdi-014555	Brachypodium distachyon	32.04	0.00e+00	900.00
IUUC-Bol-015522	Brassica oleracea	33.51	0.00e+00	835.00
IUUC-Bra-017090	Brassica rapa	33.60	0.00e+00	772.00
IUUC-Cel-018504	Caenorhabditis elegans	26.98	1.00e-155	545.00
IUUC-Cja-018983	Callithrix jacchus	92.60	0.00e+00	5645.00
IUUC-Cfa-020612	Canis familiaris	92.49	0.00e+00	5671.00
IUUC-Cpo-021700	Cavia porcellus	92.33	0.00e+00	5674.00
IUUC-Csa-023771	Chlorocebus sabaeus	92.60	0.00e+00	5644.00
IUUC-Cho-024474	Choloepus hoffmanni	85.28	0.00e+00	3575.00
IUUC-Cin-025247	Ciona intestinalis	58.16	0.00e+00	1037.00
IUUC-Csv-026255	Ciona savignyi	58.02	0.00e+00	1059.00
IUUC-Dre-028796	Danio rerio	84.58	0.00e+00	5085.00
IUUC-Dno-030056	Dasypus novemcinctus	91.79	0.00e+00	5633.00
IUUC-Dor-030711	Dipodomys ordii	92.48	0.00e+00	3400.00
IUUC-Dme-032113	Drosophila melanogaster	48.24	0.00e+00	1731.00
IUUC-Ete-032334	Echinops telfairi	84.67	0.00e+00	4494.00
IUUC-Eca-033327	Equus caballus	92.42	0.00e+00	5709.00
IUUC-Eeu-034698	Erinaceus europaeus	83.90	0.00e+00	1196.00
IUUC-Fca-035430	Felis catus	92.31	0.00e+00	5664.00
IUUC-Fal-037566	Ficedula albicollis	91.60	0.00e+00	5644.00
IUUC-Gmo-038674	Gadus morhua	81.89	0.00e+00	4801.00
IUUC-Gga-040641	Gallus gallus	92.50	0.00e+00	5677.00
IUUC-Gac-041870	Gasterosteus aculeatus	84.42	0.00e+00	8329.00
IUUC-Gma-042722	Glycine max	32.33	0.00e+00	919.00
IUUC-Ggo-045360	Gorilla gorilla	92.64	0.00e+00	5652.00
IUUC-Hsa-046955	Homo sapiens	92.48	0.00e+00	5643.00
IUUC-Hvu-047255	Hordeum vulgare	28.97	6.00e-57	218.00
IUUC-Itr-048714	Ictidomys tridecemlineatus	89.88	0.00e+00	3713.00
IUUC-Lch-049893	Latimeria chalumnae	81.34	0.00e+00	4955.00
IUUC-Lpe-050948	Leersia perrieri	33.28	0.00e+00	822.00
IUUC-Loc-052019	Lepisosteus oculatus	85.68	0.00e+00	5207.00
IUUC-Laf-054238	Loxodonta africana	91.50	0.00e+00	5581.00
IUUC-Mcc-054905	Macaca mulatta	92.60	0.00e+00	5646.00
IUUC-Meu-056297	Macropus eugenii	91.09	0.00e+00	5462.00
IUUC-Mtr-058169	Medicago truncatula	31.32	0.00e+00	915.00
IUUC-Mga-059621	Meleagris gallopavo	92.88	0.00e+00	5711.00
IUUC-Mmr-061395	Microcebus murinus	97.78	0.00e+00	2967.00
IUUC-Mdo-063037	Monodelphis domestica	96.70	0.00e+00	4856.00
IUUC-Mmu-063200	Mus musculus	91.81	0.00e+00	5561.00
IUUC-Mac-065267	Musa acuminata	32.70	0.00e+00	785.00
IUUC-Mpu-066639	Mustela putorius furo	92.69	0.00e+00	5671.00
IUUC-Mlu-067172	Myotis lucifugus	92.58	0.00e+00	5685.00
IUUC-Nle-069162	Nomascus leucogenys	92.58	0.00e+00	4534.00
IUUC-Opr-070567	Ochotona princeps	85.35	0.00e+00	1795.00
IUUC-Ont-072364	Oreochromis niloticus	83.01	0.00e+00	4980.00
IUUC-Oan-072804	Ornithorhynchus anatinus	82.48	0.00e+00	1415.00
IUUC-Ocu-074637	Oryctolagus cuniculus	92.42	0.00e+00	5628.00
IUUC-Oba-075215	Oryza barthii	33.75	0.00e+00	820.00
IUUC-Obr-076704	Oryza brachyantha	34.03	0.00e+00	869.00
IUUC-Ogl-077593	Oryza glaberrima	35.75	0.00e+00	649.00
IUUC-Ogu-078732	Oryza glumaepatula	33.73	0.00e+00	823.00
IUUC-Oin-079805	Oryza indica	32.52	0.00e+00	730.00
IUUC-Olo-080261	Oryza longistaminata	33.59	0.00e+00	825.00
IUUC-Ome-081392	Oryza meridionalis	33.70	0.00e+00	863.00
IUUC-Oni-082086	Oryza nivara	33.79	0.00e+00	825.00
IUUC-Opu-083535	Oryza punctata	33.85	0.00e+00	829.00
IUUC-Oru-084735	Oryza rufipogon	33.85	0.00e+00	826.00
IUUC-Ola-086799	Oryzias latipes	82.12	0.00e+00	4998.00
IUUC-Olu-087777	Ostreococcus lucimarinus	27.35	8.00e-84	306.00
IUUC-Oga-088126	Otolemur garnettii	92.54	0.00e+00	1516.00
IUUC-Oar-090428	Ovis aries	89.43	0.00e+00	5383.00
IUUC-Ptr-091407	Pan troglodytes	92.64	0.00e+00	5653.00
IUUC-Pan-091777	Papio anubis	93.13	0.00e+00	9181.00
IUUC-Psi-093587	Pelodiscus sinensis	93.47	0.00e+00	5801.00
IUUC-Ppa-095781	Physcomitrella patens	34.48	0.00e+00	928.00
IUUC-Pfo-097449	Poecilia formosa	82.35	0.00e+00	5055.00
IUUC-Pab-098450	Pongo abelii	90.75	0.00e+00	5514.00
IUUC-Pop-100041	Populus trichocarpa	31.43	0.00e+00	888.00
IUUC-Pca-100663	Procavia capensis	88.70	0.00e+00	2821.00
IUUC-Ppe-101386	Prunus persica	32.23	0.00e+00	817.00
IUUC-Pva-102701	Pteropus vampyrus	93.36	0.00e+00	3940.00
IUUC-Rno-105367	Rattus norvegicus	91.24	0.00e+00	5519.00
IUUC-Smo-109103	Selaginella moellendorffii	33.47	0.00e+00	911.00
IUUC-Sit-110670	Setaria italica	33.99	0.00e+00	884.00
IUUC-Sly-110952	Solanum lycopersicum	31.76	0.00e+00	883.00
IUUC-Stu-112624	Solanum tuberosum	35.26	3.00e-131	463.00
IUUC-Sar-113180	Sorex araneus	85.11	0.00e+00	4005.00
IUUC-Sbi-114596	Sorghum bicolor	31.54	0.00e+00	929.00
IUUC-Ssc-115377	Sus scrofa	97.65	0.00e+00	2964.00
IUUC-Tgu-117330	Taeniopygia guttata	90.79	0.00e+00	5642.00
IUUC-Tru-117635	Takifugu rubripes	81.89	0.00e+00	5024.00
IUUC-Tsy-119551	Tarsius syrichta	89.53	0.00e+00	3967.00
IUUC-Tni-119727	Tetraodon nigroviridis	81.71	0.00e+00	4998.00
IUUC-Tca-121017	Theobroma cacao	33.93	0.00e+00	859.00
IUUC-Tae-122892	Triticum aestivum	35.37	2.00e-25	110.00
IUUC-Tur-126292	Triticum urartu	33.87	0.00e+00	890.00
IUUC-Ttr-128332	Tursiops truncatus	92.13	0.00e+00	4765.00
IUUC-Vpa-130615	Vicugna pacos	85.56	0.00e+00	2406.00
IUUC-Vvi-131435	Vitis vinifera	33.64	0.00e+00	809.00
IUUC-Xtr-132130	Xenopus tropicalis	90.24	0.00e+00	2114.00
IUUC-Xma-133859	Xiphophorus maculatus	82.62	0.00e+00	5038.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence