iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	3.40e-23	82.2	25	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 2    kltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           +l++ktl++++++++v++++tv  +Kekia+e+gvp+ qq+LI+ G++LkDd +Lse+++++g+++hl+v+++
   Q: 25   ELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLIVRQP 97
           799********************************************************************97 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MEDQPINQCS SSTNASEKTP ESTLELNIKT LDSRTYTFQV NKNETVLLFK EKIASETGVP 60
VGQQRLIFRG RVLKDDHPLS EYHLENGHTL HLIVRQPAES APSSGTPSQG ATANDGNNTN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTATATTCG CGGAAGCGTC AATTCAGGTT TTCAAAACGT CGTCGTTGTA TCTTCCTCCT 60
CTAGATTCTT CTTTTTCTTT TCAATTTCAC CAAAATCCCG AGTTCCCGAC ACAATCGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000364	Aegilops tauschii	43.62	1.00e-69	257.00
IUUC-Aml-001312	Ailuropoda melanoleuca	46.75	9.00e-14	72.40
IUUC-Atr-002741	Amborella trichopoda	47.47	3.00e-97	349.00
IUUC-Aca-005226	Anolis carolinensis	39.02	4.00e-17	83.60
IUUC-Aly-005932	Arabidopsis lyrata	92.60	0.00e+00	1461.00
IUUC-Ame-011212	Astyanax mexicanus	34.75	3.00e-17	84.00
IUUC-Bta-012561	Bos taurus	44.94	2.00e-14	74.70
IUUC-Bol-015438	Brassica oleracea	67.59	0.00e+00	888.00
IUUC-Bra-017388	Brassica rapa	68.38	0.00e+00	891.00
IUUC-Cja-019188	Callithrix jacchus	44.94	3.00e-14	73.90
IUUC-Cfa-021178	Canis familiaris	46.75	9.00e-14	72.40
IUUC-Cpo-022133	Cavia porcellus	45.05	7.00e-15	75.90
IUUC-Dre-027415	Danio rerio	32.65	2.00e-14	74.70
IUUC-Dno-029388	Dasypus novemcinctus	45.05	8.00e-15	75.90
IUUC-Dor-030577	Dipodomys ordii	45.05	7.00e-15	75.90
IUUC-Dme-031599	Drosophila melanogaster	35.78	5.00e-12	66.60
IUUC-Ete-032733	Echinops telfairi	47.25	2.00e-14	74.70
IUUC-Eca-033397	Equus caballus	44.94	2.00e-14	74.70
IUUC-Eeu-034638	Erinaceus europaeus	43.96	3.00e-14	74.30
IUUC-Fca-036518	Felis catus	46.75	8.00e-14	72.40
IUUC-Fox-037726	Fusarium oxysporum	36.71	9.00e-12	64.30
IUUC-Gmo-038892	Gadus morhua	42.11	3.00e-13	70.50
IUUC-Gac-041284	Gasterosteus aculeatus	43.75	3.00e-15	77.40
IUUC-Gma-043104	Glycine max	46.98	7.00e-168	583.00
IUUC-Ggo-044420	Gorilla gorilla	44.94	4.00e-14	73.60
IUUC-Hsa-046336	Homo sapiens	44.94	2.00e-14	74.30
IUUC-Hvu-047806	Hordeum vulgare	41.00	1.00e-68	254.00
IUUC-Itr-048007	Ictidomys tridecemlineatus	43.96	2.00e-14	74.30
IUUC-Lch-049762	Latimeria chalumnae	37.70	1.00e-16	81.30
IUUC-Lpe-051531	Leersia perrieri	43.26	1.00e-68	254.00
IUUC-Laf-053832	Loxodonta africana	44.94	2.00e-14	74.70
IUUC-Mcc-055256	Macaca mulatta	46.07	1.00e-14	75.10
IUUC-Meu-056280	Macropus eugenii	44.44	6.00e-14	72.80
IUUC-Mtr-058642	Medicago truncatula	46.84	2.00e-160	559.00
IUUC-Mmr-061073	Microcebus murinus	44.94	2.00e-14	74.30
IUUC-Mdo-062059	Monodelphis domestica	45.05	2.00e-14	74.30
IUUC-Mmu-063815	Mus musculus	34.44	1.00e-14	75.50
IUUC-Mac-064677	Musa acuminata	44.32	2.00e-82	300.00
IUUC-Mpu-066558	Mustela putorius furo	46.75	7.00e-14	72.80
IUUC-Mlu-067697	Myotis lucifugus	34.44	6.00e-15	76.30
IUUC-Nle-068988	Nomascus leucogenys	44.94	2.00e-14	74.30
IUUC-Ont-071931	Oreochromis niloticus	45.83	1.00e-13	71.60
IUUC-Ocu-073903	Oryctolagus cuniculus	45.05	5.00e-15	76.60
IUUC-Obr-076523	Oryza brachyantha	43.29	1.00e-68	254.00
IUUC-Oin-079286	Oryza indica	39.33	5.00e-72	265.00
IUUC-Olo-080433	Oryza longistaminata	31.67	8.00e-39	155.00
IUUC-Oni-082438	Oryza nivara	39.68	1.00e-71	264.00
IUUC-Osa-086288	Oryza sativa	39.00	1.00e-67	250.00
IUUC-Ola-087116	Oryzias latipes	44.59	2.00e-13	71.20
IUUC-Oga-088614	Otolemur garnettii	46.07	6.00e-15	76.30
IUUC-Oar-090085	Ovis aries	45.05	1.00e-14	75.50
IUUC-Pan-091999	Papio anubis	46.07	1.00e-14	75.50
IUUC-Pfo-097252	Poecilia formosa	45.95	2.00e-14	74.30
IUUC-Pab-098493	Pongo abelii	45.05	9.00e-15	75.50
IUUC-Pop-099968	Populus trichocarpa	47.96	0.00e+00	627.00
IUUC-Ppe-101620	Prunus persica	48.77	0.00e+00	644.00
IUUC-Pva-103214	Pteropus vampyrus	44.32	6.00e-14	72.80
IUUC-Rno-105636	Rattus norvegicus	43.96	2.00e-14	74.70
IUUC-Sha-106964	Sarcophilus harrisii	43.62	2.00e-15	77.80
IUUC-Smo-108772	Selaginella moellendorffii	36.48	2.00e-45	176.00
IUUC-Sit-109935	Setaria italica	41.16	4.00e-65	242.00
IUUC-Sly-111457	Solanum lycopersicum	42.04	3.00e-135	475.00
IUUC-Stu-111955	Solanum tuberosum	39.68	2.00e-91	328.00
IUUC-Sar-113198	Sorex araneus	43.96	1.00e-14	75.10
IUUC-Ssc-116256	Sus scrofa	46.07	6.00e-15	76.30
IUUC-Tru-118440	Takifugu rubripes	38.02	8.00e-15	75.90
IUUC-Tsy-119351	Tarsius syrichta	51.67	2.00e-11	64.70
IUUC-Tca-121642	Theobroma cacao	51.70	0.00e+00	672.00
IUUC-Tae-125547	Triticum aestivum	43.85	2.00e-70	260.00
IUUC-Tur-126438	Triticum urartu	43.42	9.00e-72	264.00
IUUC-Tbe-127897	Tupaia belangeri	45.05	5.00e-15	76.30
IUUC-Ttr-128389	Tursiops truncatus	44.94	2.00e-14	74.70
IUUC-Vvi-130920	Vitis vinifera	47.62	1.00e-180	626.00
IUUC-Xtr-132680	Xenopus tropicalis	45.83	5.00e-13	69.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence