iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000011574.2	ENSORLT00000014502.1	ENSORLP00000014501.1
ENSORLG00000011574.2	ENSORLT00000014499.2	ENSORLP00000014498.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.10e-11	45.0	1162	1209

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           + C+vC+++g+de +l+ C++C+++fH  Cl ++     p+ e w Cp C+
   Q: 1162 ARCKVCRRKGDDE-KLILCDECNKAFHLFCLRPA-LYRIPTGE-WLCPACQ 1209
           57*********88.6*******************.99*****8.******7 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MAPLLGRKPY PLAKPLAEAP GPGDEVYIIE HTKEAFRNKE EYEARLQKYG ERIWTCKSTG 60
SLQLTHKEAW EEEQEVTELL QEEYPQWFEK PVLEMVHHNT VSLDKLVEMS WLEVLTKYAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACCGC TTTTGGGCCG GAAACCGTAC CCACTGGCTA AGCCTTTAGC CGAGGCTCCA 60
GGCCCGGGAG ACGAGGTCTA CATCATCGAG CACACCAAGG AGGCCTTCAG GAACAAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011989--ARM-like
IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR028941--WHIM2_dom
IPR013136--WSTF_Acf1_Cbp146
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50827--DDT
PS51136--WAC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS50089--ZF_RING_2

Pfam

PF00439--Bromodomain
PF00628--PHD
PF10537--WAC_Acf1_DNA_bd
PF15612--WHIM1
PF15613--WSD

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO
SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002113	Ailuropoda melanoleuca	59.64	0.00e+00	1335.00
IUUC-Apl-003454	Anas platyrhynchos	61.40	0.00e+00	1428.00
IUUC-Ame-011469	Astyanax mexicanus	71.64	0.00e+00	1387.00
IUUC-Bta-012408	Bos taurus	59.59	0.00e+00	1381.00
IUUC-Cja-019194	Callithrix jacchus	61.16	0.00e+00	1250.00
IUUC-Cfa-021083	Canis familiaris	59.96	0.00e+00	1385.00
IUUC-Cpo-021422	Cavia porcellus	59.37	0.00e+00	931.00
IUUC-Cre-022831	Chlamydomonas reinhardtii	45.28	2.00e-11	64.70
IUUC-Csa-023848	Chlorocebus sabaeus	59.25	0.00e+00	1388.00
IUUC-Dre-027895	Danio rerio	70.67	0.00e+00	1470.00
IUUC-Dno-029686	Dasypus novemcinctus	58.85	0.00e+00	1357.00
IUUC-Dor-030625	Dipodomys ordii	56.98	2.00e-115	410.00
IUUC-Ete-032702	Echinops telfairi	54.29	1.00e-130	461.00
IUUC-Eca-033647	Equus caballus	59.60	0.00e+00	1378.00
IUUC-Eeu-034626	Erinaceus europaeus	55.58	0.00e+00	1076.00
IUUC-Fca-036092	Felis catus	57.94	0.00e+00	1123.00
IUUC-Fal-037127	Ficedula albicollis	60.92	0.00e+00	1446.00
IUUC-Gmo-039455	Gadus morhua	73.28	0.00e+00	1782.00
IUUC-Gga-041120	Gallus gallus	61.17	0.00e+00	1404.00
IUUC-Gac-041873	Gasterosteus aculeatus	80.61	0.00e+00	1939.00
IUUC-Gma-044242	Glycine max	48.98	3.00e-13	67.00
IUUC-Ggo-045317	Gorilla gorilla	60.13	0.00e+00	1347.00
IUUC-Hsa-046773	Homo sapiens	60.22	0.00e+00	1380.00
IUUC-Itr-049026	Ictidomys tridecemlineatus	59.19	0.00e+00	1326.00
IUUC-Lch-050271	Latimeria chalumnae	63.81	0.00e+00	642.00
IUUC-Loc-052699	Lepisosteus oculatus	71.68	0.00e+00	701.00
IUUC-Mcc-055171	Macaca mulatta	59.25	0.00e+00	1388.00
IUUC-Meu-055990	Macropus eugenii	58.11	0.00e+00	1188.00
IUUC-Mga-059913	Meleagris gallopavo	60.43	0.00e+00	1342.00
IUUC-Mmr-061681	Microcebus murinus	59.57	0.00e+00	1386.00
IUUC-Mdo-062486	Monodelphis domestica	59.18	0.00e+00	1349.00
IUUC-Mmu-063460	Mus musculus	58.93	0.00e+00	1317.00
IUUC-Mpu-066324	Mustela putorius furo	57.43	0.00e+00	654.00
IUUC-Mlu-067334	Myotis lucifugus	60.22	0.00e+00	1386.00
IUUC-Nle-069983	Nomascus leucogenys	60.28	0.00e+00	1403.00
IUUC-Opr-070678	Ochotona princeps	56.57	2.00e-131	464.00
IUUC-Ont-071565	Oreochromis niloticus	86.33	0.00e+00	1925.00
IUUC-Ocu-074779	Oryctolagus cuniculus	59.81	0.00e+00	1338.00
IUUC-Oba-075648	Oryza barthii	52.94	2.00e-13	69.70
IUUC-Obr-076539	Oryza brachyantha	53.19	2.00e-12	66.60
IUUC-Ogl-076971	Oryza glaberrima	52.94	2.00e-13	69.70
IUUC-Ogu-078790	Oryza glumaepatula	52.94	2.00e-13	69.70
IUUC-Oin-079240	Oryza indica	52.94	2.00e-13	69.30
IUUC-Ome-081195	Oryza meridionalis	52.94	2.00e-13	69.70
IUUC-Oni-082728	Oryza nivara	52.94	2.00e-13	69.70
IUUC-Oru-084688	Oryza rufipogon	52.94	2.00e-13	69.70
IUUC-Oga-088475	Otolemur garnettii	61.31	0.00e+00	751.00
IUUC-Oar-090191	Ovis aries	60.86	0.00e+00	1189.00
IUUC-Ptr-090963	Pan troglodytes	60.04	0.00e+00	1373.00
IUUC-Pan-091819	Papio anubis	56.89	0.00e+00	972.00
IUUC-Psi-093967	Pelodiscus sinensis	60.35	0.00e+00	1382.00
IUUC-Pfo-096939	Poecilia formosa	83.50	0.00e+00	1962.00
IUUC-Pab-098679	Pongo abelii	58.96	0.00e+00	1312.00
IUUC-Pop-099061	Populus trichocarpa	62.07	3.00e-09	55.50
IUUC-Pva-102969	Pteropus vampyrus	59.79	0.00e+00	1289.00
IUUC-Rno-104927	Rattus norvegicus	59.19	0.00e+00	1324.00
IUUC-Sha-107021	Sarcophilus harrisii	58.64	0.00e+00	1280.00
IUUC-Ssc-116243	Sus scrofa	59.74	0.00e+00	1386.00
IUUC-Tgu-117073	Taeniopygia guttata	61.28	0.00e+00	1048.00
IUUC-Tru-118265	Takifugu rubripes	77.79	0.00e+00	1808.00
IUUC-Tur-126242	Triticum urartu	40.45	2.00e-13	72.80
IUUC-Ttr-128885	Tursiops truncatus	56.64	0.00e+00	1090.00
IUUC-Xtr-131812	Xenopus tropicalis	57.10	0.00e+00	925.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence