iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005579

Ensembl Protein ID

fgenesh1_pm.C_scaffold_8000989

UniProt Accession

D7MS95; D7MS95_ARALL

Genbank Protein ID

EFH42194.1

Protein Name

F-box family protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_331646

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_8000989	fgenesh1_pm.C_scaffold_8000989	fgenesh1_pm.C_scaffold_8000989

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	2.80e-06	28.1	112	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 103  ldrlpeeilveilklldkeellraarvcrrwqelasqkalwkt 145
           + +lp++il++i+++ld ++ll+ a+v+r+w++++++++lw+t
   Q: 112  IPSLPQDILIHIFSFLDVSSLLSSAQVSRSWNQATHENSLWQT 154
           6789******************************999****98 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MERYQNLMVG EALSKNRLYS FACNELSSIL NLAYARLPKN VKALIFRDTL SAFRLLPDIN 60
TSAAVSAANL LLKSVEAVLP KQKKNLAIVE FKQAKVALKR RSKSCEEKDI DIPSLPQDIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAGAT ACCAAAATCT AATGGTAGGA GAAGCTTTAT CGAAGAATCG TCTTTACTCA 60
TTTGCTTGCA ATGAACTAAG CTCCATTTTG AATCTTGCTT ACGCTCGATT ACCCAAAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

KEGG

aly:ARALYDRAFT_331646

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002801	Amborella trichopoda	41.95	2.00e-52	198.00
IUUC-Ath-007384	Arabidopsis thaliana	89.81	2.00e-125	440.00
IUUC-Ame-011238	Astyanax mexicanus	37.31	5.00e-06	45.10
IUUC-Bdi-014933	Brachypodium distachyon	33.33	2.00e-07	48.50
IUUC-Bol-015838	Brassica oleracea	76.99	2.00e-101	361.00
IUUC-Csa-023865	Chlorocebus sabaeus	35.19	2.00e-05	44.30
IUUC-Ete-032477	Echinops telfairi	39.06	3.00e-07	49.30
IUUC-Gmo-039537	Gadus morhua	36.23	4.00e-07	48.50
IUUC-Kpa-049204	Komagataella pastoris	32.81	4.00e-06	46.20
IUUC-Lch-049981	Latimeria chalumnae	41.51	1.00e-06	47.40
IUUC-Loc-052324	Lepisosteus oculatus	41.67	6.00e-06	44.70
IUUC-Mtr-058175	Medicago truncatula	47.84	5.00e-54	204.00
IUUC-Mla-059180	Melampsora laricipopulina	33.90	1.70e+00	28.10
IUUC-Mpu-065756	Mustela putorius furo	41.67	3.60e-01	29.60
IUUC-Opr-070436	Ochotona princeps	33.33	2.00e-06	46.20
IUUC-Ont-072618	Oreochromis niloticus	40.35	9.00e-07	47.40
IUUC-Ola-086567	Oryzias latipes	35.14	6.00e-07	48.10
IUUC-Ppa-095448	Physcomitrella patens	25.90	5.00e-17	80.90
IUUC-Pfo-096760	Poecilia formosa	43.75	2.00e-06	46.60
IUUC-Ppe-102013	Prunus persica	46.83	6.00e-58	216.00
IUUC-Pva-102705	Pteropus vampyrus	34.25	3.00e-06	45.80
IUUC-Sha-107356	Sarcophilus harrisii	37.50	1.00e-06	47.00
IUUC-Sly-110947	Solanum lycopersicum	41.86	3.00e-44	171.00
IUUC-Stu-112615	Solanum tuberosum	41.00	1.00e-43	169.00
IUUC-Sbi-113808	Sorghum bicolor	40.61	2.00e-45	175.00
IUUC-Ssc-115489	Sus scrofa	33.33	3.00e-05	43.10
IUUC-Tru-117842	Takifugu rubripes	34.72	4.00e-07	48.50
IUUC-Tni-120727	Tetraodon nigroviridis	39.66	6.00e-07	48.10
IUUC-Tca-121334	Theobroma cacao	53.42	9.00e-39	152.00
IUUC-Tur-126713	Triticum urartu	37.93	2.00e-25	108.00
IUUC-Vvi-131501	Vitis vinifera	45.04	1.00e-60	225.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence