iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049120

Ensembl Protein ID

CAY67210

UniProt Accession

C4QVD7; C4QVD7_KOMPG

Genbank Protein ID

CAY67210.1

Protein Name

Ubiquitin-protein ligase (E3)

Genbank Nucleotide ID

FN392319

Gene Name

PAS_chr1-3_0150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-3_0150	CAY67210	CAY67210

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-07	29.0	1218	1249
E3 activity/N-recognin/UBR-box	1.20e-20	71.9	95	164

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 12   plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
            +v +CgH++h +C+  +     +s+k+ +CPlCr
   Q: 1218 HIVKSCGHHMHYKCFSEL---LENSRKFSTCPLCR 1249
           33688**********666...577**********8 PP

E3 activity/N-recognin/UBR-box

   S: 3    CgrvfkvgetiyeCrtCsvdetlvlCteCfakvvHkdHey..klkksggggfCdCGdteAwedgskCkkl 70
           C+r fk+ge iy+C +C+ det+v+C++Cf+++ H+dHe+  +++ s++ g+CdCGd++Aw+ + +C+++
   Q: 95   CARQFKQGEPIYRCYECGFDETCVMCMHCFNREQHRDHEVsiSIASSSNDGICDCGDPQAWNIELHCQSE 164
           ***************************************95567788889**************99*987 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MSLSDPEDSL RRLLVSLPSN VKYDAESSVL KSRLNLALYF SLTKRGEYLG SLVTDLPMDL 60
PSSYSEILEA EDDSYSRLAE SMYKCPNYKH HGRPCARQFK QGEPIYRCYE CGFDETCVMC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATTGT CTGATCCTGA GGACAGCCTA AGACGTCTAC TTGTGAGTTT ACCCTCCAAT 60
GTTAAGTACG ATGCGGAGTC TTCGGTATTG AAAAGCCGAC TGAACCTTGC TCTATATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR003769--ClpS_core
IPR014719--Ribosomal_L7/12_C/ClpS-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR003126--Znf_UBR

PROSITE

PS50089--ZF_RING_2
PS51157--ZF_UBR

Pfam

PF02617--ClpS
PF13639--zf-RING_2
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding
GO:0030163--P:protein catabolic process

KEGG

ppa:PAS_chr1-3_0150

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007946	Ashbya gossypii	26.81	1.00e-148	519.00
IUUC-Dre-028242	Danio rerio	26.89	4.00e-19	87.00
IUUC-Gac-042622	Gasterosteus aculeatus	22.23	4.00e-35	142.00
IUUC-Mmr-061128	Microcebus murinus	28.77	2.00e-19	90.10
IUUC-Ont-072189	Oreochromis niloticus	22.38	8.00e-29	121.00
IUUC-Osa-086106	Oryza sativa	40.48	9.00e-07	47.00
IUUC-Sce-106272	Saccharomyces cerevisiae	25.14	5.00e-143	500.00
IUUC-Tni-119987	Tetraodon nigroviridis	30.58	2.00e-21	97.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence