iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000090371.3	ENSDART00000173403.1	ENSDARP00000142622.1
ENSDARG00000090371.3	ENSDART00000123429.2	ENSDARP00000111607.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-06	28.3	12	81
E3 activity/RING/RING	7.80e-08	33.6	15	55

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqpl.teedlvPnltlrrliqawceen 72
           + +C+I l+++++Pv +p+G+ +  ++I  + +s+    cP++++++ ++ d+  n++lr++ +++ e +
   Q: 12   QVHCSICLDVFTNPVSIPCGHNFCMACIGSYWKSSALfMCPMCKKTFfKQPDISINTVLREIAEKFKEMK 81
           679***************************99888888********99999*************998765 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl+ f + p++ pCgH f+  C+   w     +ss  f+CP C+
   Q: 15   CSICLDVFTN-PVSIPCGHNFCMACIgSYW-----KSSALFMCPMCK 55
           **********.***************7667.....7**********6 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MASPSSMLAE EQVHCSICLD VFTNPVSIPC GHNFCMACIG SYWKSSALFM CPMCKKTFFK 60
QPDISINTVL REIAEKFKEM KRNPIVSLQS ATQPDPTPSP VELPIEMPEL IPPNAPWAQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTAAATACA CGCAGCCCTG ATCAGGACGG TCTGATAGTC TGAGCCGTGT CTGGTGACGG 60
TGCTGTCAAA GTGAAACTAG GCTAAGGGGG CGGGCAGGGG ATATTTCAGG AGAAGCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

dre:571944

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011809	Astyanax mexicanus	75.46	0.00e+00	882.00
IUUC-Cre-022560	Chlamydomonas reinhardtii	37.18	7.00e-07	49.70
IUUC-Gac-042479	Gasterosteus aculeatus	67.56	3.00e-178	619.00
IUUC-Loc-052579	Lepisosteus oculatus	54.96	2.00e-155	542.00
IUUC-Ont-071520	Oreochromis niloticus	69.64	0.00e+00	775.00
IUUC-Ola-086928	Oryzias latipes	66.13	0.00e+00	739.00
IUUC-Pfo-096948	Poecilia formosa	68.21	0.00e+00	786.00
IUUC-Tru-118612	Takifugu rubripes	62.89	0.00e+00	729.00
IUUC-Tni-120467	Tetraodon nigroviridis	60.85	0.00e+00	659.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence