iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116923

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01015900

Gene Name

RBX1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000010035.1	ENSTGUT00000010460.1	ENSTGUP00000010350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.30e-09	37.0	17	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplv..................lpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+++++d +++                  + C+H+fh++C+ +w       ++++ CPl++
   Q: 17   CAICRNHIMD-LCIecqanqasatseectvawGVCNHAFHFHCISRW------LKTRQVCPLDN 73
           ********66.55333444444433333333488*************......********975 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

QWNAVALWAW DIVVDNCAIC RNHIMDLCIE CQANQASATS EECTVAWGVC NHAFHFHCIS 60
RWLKTRQVCP LDNREWEFQ 79

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGTGGAACG CCGTAGCTCT GTGGGCATGG GACATTGTGG TTGATAACTG TGCCATTTGC 60
AGAAACCACA TTATGGATCT GTGTAAGTAC ATGGGGAGGG TCACATTTGG ACTTGTATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

Gene Ontology

GO:0031462--C:Cul2-RING ubiquitin ligase complex
GO:0031463--C:Cul3-RING ubiquitin ligase complex
GO:0031464--C:Cul4A-RING E3 ubiquitin ligase complex
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0031466--C:Cul5-RING ubiquitin ligase complex
GO:0031467--C:Cul7-RING ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0019788--F:NEDD8 transferase activity
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0008270--F:zinc ion binding
GO:0006513--P:protein monoubiquitination
GO:0045116--P:protein neddylation
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001798	Ailuropoda melanoleuca	98.73	5.00e-43	165.00
IUUC-Atr-002900	Amborella trichopoda	97.47	2.00e-42	163.00
IUUC-Apl-003762	Anas platyrhynchos	100.00	1.00e-41	160.00
IUUC-Aca-005328	Anolis carolinensis	98.73	6.00e-43	164.00
IUUC-Aly-005923	Arabidopsis lyrata	96.20	2.00e-41	159.00
IUUC-Ath-007535	Arabidopsis thaliana	93.67	2.00e-39	152.00
IUUC-Ago-007991	Ashbya gossypii	64.10	3.00e-29	119.00
IUUC-Acl-008332	Aspergillus clavatus	92.41	3.00e-41	159.00
IUUC-Afl-008537	Aspergillus flavus	92.41	6.00e-41	158.00
IUUC-Afu-008985	Aspergillus fumigatus	92.41	3.00e-41	159.00
IUUC-Ani-009342	Aspergillus nidulans	91.14	4.00e-41	159.00
IUUC-Ang-009778	Aspergillus niger	92.41	5.00e-41	158.00
IUUC-Aor-009918	Aspergillus oryzae	92.41	6.00e-41	158.00
IUUC-Ame-010814	Astyanax mexicanus	100.00	1.00e-28	117.00
IUUC-Bgr-012224	Blumeria graminis	93.67	3.00e-42	162.00
IUUC-Bta-012426	Bos taurus	98.73	5.00e-43	164.00
IUUC-Bci-013839	Botrytis cinerea	96.20	5.00e-42	162.00
IUUC-Bdi-014575	Brachypodium distachyon	97.47	7.00e-42	161.00
IUUC-Bol-015671	Brassica oleracea	96.20	7.00e-42	161.00
IUUC-Bra-017034	Brassica rapa	96.20	7.00e-42	161.00
IUUC-Cel-018195	Caenorhabditis elegans	88.61	6.00e-39	151.00
IUUC-Cja-018788	Callithrix jacchus	98.73	3.00e-43	165.00
IUUC-Cpo-021365	Cavia porcellus	98.73	5.00e-43	164.00
IUUC-Cre-022904	Chlamydomonas reinhardtii	54.43	1.00e-21	94.40
IUUC-Csa-024198	Chlorocebus sabaeus	98.73	5.00e-43	164.00
IUUC-Cho-024344	Choloepus hoffmanni	100.00	4.00e-26	108.00
IUUC-Cin-025449	Ciona intestinalis	97.47	1.00e-42	163.00
IUUC-Cgl-026522	Colletotrichum gloeosporioides	94.94	3.00e-42	162.00
IUUC-Cne-027067	Cryptococcus neoformans	79.10	8.00e-30	122.00
IUUC-Cme-027268	Cyanidioschyzon merolae	72.37	2.00e-31	127.00
IUUC-Dre-027434	Danio rerio	98.73	5.00e-43	164.00
IUUC-Dno-029252	Dasypus novemcinctus	98.73	1.00e-42	164.00
IUUC-Dor-030861	Dipodomys ordii	68.35	1.00e-26	110.00
IUUC-Dse-031355	Dothistroma septosporum	93.67	2.00e-41	160.00
IUUC-Dme-031585	Drosophila melanogaster	97.47	1.00e-42	163.00
IUUC-Ete-032747	Echinops telfairi	55.74	5.00e-12	62.00
IUUC-Eca-033758	Equus caballus	98.73	5.00e-43	164.00
IUUC-Fca-035586	Felis catus	98.73	5.00e-43	164.00
IUUC-Fal-037097	Ficedula albicollis	100.00	2.00e-42	162.00
IUUC-Fox-037881	Fusarium oxysporum	94.87	2.00e-40	156.00
IUUC-Fso-038373	Fusarium solani	93.67	1.00e-41	160.00
IUUC-Gmo-039457	Gadus morhua	98.73	6.00e-43	164.00
IUUC-Ggr-039970	Gaeumannomyces graminis	93.67	9.00e-41	157.00
IUUC-Gga-040328	Gallus gallus	98.73	5.00e-43	164.00
IUUC-Gac-041578	Gasterosteus aculeatus	98.73	5.00e-43	164.00
IUUC-Gma-042692	Glycine max	97.47	8.00e-42	161.00
IUUC-Ggo-045249	Gorilla gorilla	100.00	5.00e-27	111.00
IUUC-Hsa-046279	Homo sapiens	98.73	5.00e-43	164.00
IUUC-Hvu-047597	Hordeum vulgare	97.47	8.00e-42	161.00
IUUC-Itr-048174	Ictidomys tridecemlineatus	98.73	5.00e-43	164.00
IUUC-Kpa-049330	Komagataella pastoris	64.56	2.00e-29	119.00
IUUC-Lch-049667	Latimeria chalumnae	98.73	5.00e-43	164.00
IUUC-Lma-053052	Leptosphaeria maculans	96.20	7.00e-42	161.00
IUUC-Laf-053827	Loxodonta africana	98.73	4.00e-43	165.00
IUUC-Mcc-055208	Macaca mulatta	98.73	5.00e-43	164.00
IUUC-Meu-056143	Macropus eugenii	100.00	6.00e-42	160.00
IUUC-Mor-057158	Magnaporthe oryzae	94.94	2.00e-41	159.00
IUUC-Mpo-057409	Magnaporthe poae	93.67	9.00e-41	157.00
IUUC-Mtr-058505	Medicago truncatula	97.47	6.00e-42	161.00
IUUC-Mla-059071	Melampsora laricipopulina	79.79	8.00e-39	151.00
IUUC-Mga-059797	Meleagris gallopavo	98.73	5.00e-43	164.00
IUUC-Mvi-060401	Microbotryum violaceum	92.41	1.00e-40	158.00
IUUC-Mmr-061077	Microcebus murinus	98.73	5.00e-43	164.00
IUUC-Mdo-062218	Monodelphis domestica	98.73	5.00e-43	164.00
IUUC-Mmu-064224	Mus musculus	98.73	5.00e-43	164.00
IUUC-Mac-064505	Musa acuminata	97.47	1.00e-41	160.00
IUUC-Mpu-066572	Mustela putorius furo	98.73	5.00e-43	164.00
IUUC-Mlu-067821	Myotis lucifugus	98.73	5.00e-43	164.00
IUUC-Nfi-068412	Neosartorya fischeri	92.41	3.00e-41	159.00
IUUC-Nle-069309	Nomascus leucogenys	98.73	5.00e-43	164.00
IUUC-Opr-070307	Ochotona princeps	98.73	5.00e-43	164.00
IUUC-Ont-071677	Oreochromis niloticus	98.73	5.00e-43	164.00
IUUC-Oan-072926	Ornithorhynchus anatinus	100.00	6.00e-42	160.00
IUUC-Oba-075405	Oryza barthii	97.47	8.00e-42	161.00
IUUC-Obr-076843	Oryza brachyantha	97.47	3.00e-42	163.00
IUUC-Ogl-077608	Oryza glaberrima	97.47	8.00e-42	161.00
IUUC-Ogu-078316	Oryza glumaepatula	97.47	7.00e-42	161.00
IUUC-Oin-079918	Oryza indica	62.81	4.00e-36	143.00
IUUC-Olo-080968	Oryza longistaminata	95.83	1.00e-22	97.10
IUUC-Ome-081246	Oryza meridionalis	96.20	1.00e-41	160.00
IUUC-Oni-082133	Oryza nivara	96.20	1.00e-41	160.00
IUUC-Opu-084035	Oryza punctata	96.20	3.00e-42	162.00
IUUC-Oru-084941	Oryza rufipogon	97.47	8.00e-42	161.00
IUUC-Osa-085800	Oryza sativa	97.47	8.00e-42	161.00
IUUC-Ola-087352	Oryzias latipes	98.73	5.00e-43	165.00
IUUC-Olu-087676	Ostreococcus lucimarinus	53.16	7.00e-23	98.20
IUUC-Oga-088880	Otolemur garnettii	98.73	5.00e-43	164.00
IUUC-Oar-089286	Ovis aries	98.73	6.00e-43	164.00
IUUC-Ptr-091402	Pan troglodytes	98.73	5.00e-43	164.00
IUUC-Pan-091687	Papio anubis	97.47	3.00e-42	162.00
IUUC-Psi-093640	Pelodiscus sinensis	98.73	4.00e-43	165.00
IUUC-Pma-094723	Petromyzon marinus	100.00	2.00e-42	162.00
IUUC-Pno-094822	Phaeosphaeria nodorum	96.20	2.00e-42	163.00
IUUC-Ppa-095730	Physcomitrella patens	97.47	2.00e-42	163.00
IUUC-Pfo-096055	Poecilia formosa	98.73	5.00e-43	164.00
IUUC-Pab-098577	Pongo abelii	98.73	5.00e-43	164.00
IUUC-Pop-099697	Populus trichocarpa	97.47	2.00e-42	163.00
IUUC-Pca-100719	Procavia capensis	98.73	5.00e-43	164.00
IUUC-Ppe-101429	Prunus persica	97.47	1.00e-42	164.00
IUUC-Pva-102885	Pteropus vampyrus	100.00	7.00e-27	111.00
IUUC-Pgr-103470	Puccinia graminis	93.67	2.00e-41	159.00
IUUC-Ptt-103909	Puccinia triticina	92.16	2.00e-24	103.00
IUUC-Pte-104144	Pyrenophora teres	96.20	8.00e-42	160.00
IUUC-Pyt-104533	Pyrenophora triticirepentis	96.20	4.00e-42	162.00
IUUC-Rno-105912	Rattus norvegicus	98.73	5.00e-43	164.00
IUUC-Sce-106407	Saccharomyces cerevisiae	65.38	3.00e-29	119.00
IUUC-Sha-107549	Sarcophilus harrisii	98.73	5.00e-43	164.00
IUUC-Sja-108003	Schizosaccharomyces japonicus	89.87	2.00e-39	153.00
IUUC-Spo-108091	Schizosaccharomyces pombe	87.34	5.00e-38	148.00
IUUC-Ssl-108634	Sclerotinia sclerotiorum	96.20	5.00e-42	162.00
IUUC-Smo-109406	Selaginella moellendorffii	97.47	4.00e-42	162.00
IUUC-Sit-110419	Setaria italica	96.20	2.00e-41	159.00
IUUC-Sly-110933	Solanum lycopersicum	96.20	3.00e-42	162.00
IUUC-Stu-112567	Solanum tuberosum	96.20	4.00e-42	162.00
IUUC-Sar-113409	Sorex araneus	100.00	7.00e-27	111.00
IUUC-Sbi-113799	Sorghum bicolor	97.47	6.00e-42	161.00
IUUC-Sre-115142	Sporisorium reilianum	91.14	6.00e-40	154.00
IUUC-Tru-117710	Takifugu rubripes	96.20	2.00e-42	162.00
IUUC-Tni-119934	Tetraodon nigroviridis	98.73	2.00e-43	167.00
IUUC-Tca-121820	Theobroma cacao	96.20	2.00e-41	160.00
IUUC-Tre-122212	Trichoderma reesei	94.87	8.00e-41	157.00
IUUC-Tvi-122357	Trichoderma virens	93.67	1.00e-41	160.00
IUUC-Tae-125834	Triticum aestivum	97.47	4.00e-42	162.00
IUUC-Tur-125958	Triticum urartu	97.47	1.00e-41	159.00
IUUC-Tme-126940	Tuber melanosporum	92.41	2.00e-41	159.00
IUUC-Tbe-127918	Tupaia belangeri	100.00	6.00e-42	160.00
IUUC-Ttr-128306	Tursiops truncatus	100.00	6.00e-42	160.00
IUUC-Uma-129482	Ustilago maydis	86.08	5.00e-38	148.00
IUUC-Vda-129917	Verticillium dahliae	96.20	8.00e-43	164.00
IUUC-Vpa-130142	Vicugna pacos	94.94	1.00e-39	154.00
IUUC-Vvi-130957	Vitis vinifera	97.47	6.00e-42	161.00
IUUC-Xma-133061	Xiphophorus maculatus	98.73	5.00e-43	164.00
IUUC-Yli-134542	Yarrowia lipolytica	67.95	7.00e-30	121.00
IUUC-Zma-135466	Zea mays	97.47	7.00e-42	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence