iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003371

Ensembl Protein ID

ENSAPLP00000012334.1

UniProt Accession

U3IYK8; U3IYK8_ANAPL

Genbank Protein ID

ENSAPLP00000012334

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01031496

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000012525.1	ENSAPLT00000013069.1	ENSAPLP00000012334.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	6.30e-20	70.4	183	220
ULD/UDP/UBQ/UBQ_PIM	5.50e-22	77.2	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 183  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 220
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m ++ k+l++k++e  +++++ v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    MLINSKALNEKTYEYAGKKKEQVKALKEKIESERGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 78
           667889*********************************************************************997 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

MLINSKALNE KTYEYAGKKK EQVKALKEKI ESERGKDAFP VAGQKLIYAG KILNDDTALK 60
EYKIDEKNFV VVMVTKPKAA AAATQQSNST ATVSLTSAAP TPASAPTPAA APVPAPVPTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTATTA ACAGCAAAGC GTTGAATGAA AAAACTTATG AATATGCAGG AAAAAGAAAG 60
CTCTAGAAGG TGGAGTTTGG ATCAGTAAGT TCATAACAGA TTGGCGGCAT CTGTCTGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	37.85	6.00e-34	137.00
IUUC-Aml-001195	Ailuropoda melanoleuca	82.40	2.00e-87	315.00
IUUC-Atr-003116	Amborella trichopoda	37.07	5.00e-34	137.00
IUUC-Aca-004599	Anolis carolinensis	78.55	3.00e-90	325.00
IUUC-Aly-005498	Arabidopsis lyrata	40.24	1.00e-42	167.00
IUUC-Ath-006676	Arabidopsis thaliana	39.08	6.00e-43	167.00
IUUC-Ago-007830	Ashbya gossypii	43.56	3.00e-14	72.40
IUUC-Acl-008212	Aspergillus clavatus	47.79	5.00e-21	95.10
IUUC-Afl-008605	Aspergillus flavus	45.52	9.00e-20	90.90
IUUC-Afu-008877	Aspergillus fumigatus	47.06	1.00e-20	93.60
IUUC-Ani-009460	Aspergillus nidulans	47.79	6.00e-22	97.80
IUUC-Aor-010032	Aspergillus oryzae	35.23	2.00e-27	115.00
IUUC-Ate-010458	Aspergillus terreus	39.44	8.00e-31	127.00
IUUC-Ame-011107	Astyanax mexicanus	64.76	7.00e-33	134.00
IUUC-Bgr-012056	Blumeria graminis	45.89	2.00e-14	73.20
IUUC-Bta-012922	Bos taurus	82.77	2.00e-88	319.00
IUUC-Bci-013933	Botrytis cinerea	50.74	4.00e-21	95.10
IUUC-Bdi-014452	Brachypodium distachyon	35.69	7.00e-36	144.00
IUUC-Bol-016493	Brassica oleracea	36.00	8.00e-38	150.00
IUUC-Bra-017983	Brassica rapa	39.13	9.00e-42	164.00
IUUC-Cel-018364	Caenorhabditis elegans	36.73	2.00e-19	89.40
IUUC-Cja-019496	Callithrix jacchus	70.90	7.00e-68	250.00
IUUC-Cfa-020683	Canis familiaris	81.89	4.00e-93	334.00
IUUC-Cpo-022145	Cavia porcellus	83.81	2.00e-93	335.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	38.89	6.00e-31	127.00
IUUC-Csa-023714	Chlorocebus sabaeus	81.88	4.00e-101	360.00
IUUC-Cho-024814	Choloepus hoffmanni	64.98	6.00e-72	263.00
IUUC-Cin-025741	Ciona intestinalis	43.58	2.00e-39	155.00
IUUC-Csv-025823	Ciona savignyi	35.97	3.00e-33	135.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	44.00	3.00e-14	72.40
IUUC-Cne-027056	Cryptococcus neoformans	43.42	5.00e-12	65.10
IUUC-Cme-027260	Cyanidioschyzon merolae	29.02	5.00e-26	111.00
IUUC-Dre-028369	Danio rerio	69.84	2.00e-80	291.00
IUUC-Dno-029543	Dasypus novemcinctus	83.96	2.00e-92	332.00
IUUC-Dor-030358	Dipodomys ordii	62.17	1.00e-65	242.00
IUUC-Dse-031336	Dothistroma septosporum	50.38	1.00e-19	90.10
IUUC-Dme-032027	Drosophila melanogaster	36.26	3.00e-61	228.00
IUUC-Ete-032583	Echinops telfairi	73.00	3.00e-59	222.00
IUUC-Eca-034243	Equus caballus	85.17	1.00e-87	316.00
IUUC-Eeu-034721	Erinaceus europaeus	80.28	1.00e-66	246.00
IUUC-Fca-035679	Felis catus	82.40	7.00e-90	323.00
IUUC-Fal-037148	Ficedula albicollis	91.39	2.00e-110	392.00
IUUC-Fox-037960	Fusarium oxysporum	44.12	3.00e-16	79.30
IUUC-Fso-038107	Fusarium solani	44.03	5.00e-16	78.20
IUUC-Gmo-039080	Gadus morhua	60.16	5.00e-60	224.00
IUUC-Ggr-040116	Gaeumannomyces graminis	46.32	2.00e-17	82.80
IUUC-Gga-040544	Gallus gallus	91.88	2.00e-149	521.00
IUUC-Gac-041621	Gasterosteus aculeatus	58.96	1.00e-64	239.00
IUUC-Gma-043835	Glycine max	36.70	2.00e-41	162.00
IUUC-Ggo-045125	Gorilla gorilla	84.06	4.00e-93	334.00
IUUC-Hsa-046519	Homo sapiens	84.06	4.00e-93	334.00
IUUC-Hvu-047832	Hordeum vulgare	38.40	1.00e-35	143.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	84.21	1.00e-81	296.00
IUUC-Kpa-049314	Komagataella pastoris	37.02	3.00e-31	128.00
IUUC-Lch-050553	Latimeria chalumnae	72.49	5.00e-75	274.00
IUUC-Lpe-051087	Leersia perrieri	36.36	1.00e-35	143.00
IUUC-Loc-051758	Lepisosteus oculatus	55.86	8.00e-87	313.00
IUUC-Lma-053328	Leptosphaeria maculans	50.98	4.00e-09	52.00
IUUC-Laf-054293	Loxodonta africana	83.08	4.00e-90	324.00
IUUC-Mcc-055600	Macaca mulatta	82.84	1.00e-98	352.00
IUUC-Meu-056082	Macropus eugenii	62.82	2.00e-69	255.00
IUUC-Mor-057287	Magnaporthe oryzae	47.62	2.00e-15	76.60
IUUC-Mpo-057609	Magnaporthe poae	46.56	9.00e-17	80.50
IUUC-Mtr-058148	Medicago truncatula	36.88	3.00e-41	162.00
IUUC-Mla-058961	Melampsora laricipopulina	45.19	6.00e-25	108.00
IUUC-Mga-060060	Meleagris gallopavo	54.06	1.00e-36	146.00
IUUC-Mvi-060220	Microbotryum violaceum	45.19	1.00e-21	97.40
IUUC-Mmr-061159	Microcebus murinus	85.19	6.00e-90	323.00
IUUC-Mdo-061967	Monodelphis domestica	82.37	2.00e-82	298.00
IUUC-Mmu-063258	Mus musculus	81.92	1.00e-101	363.00
IUUC-Mac-064724	Musa acuminata	38.43	1.00e-44	173.00
IUUC-Mpu-066389	Mustela putorius furo	82.40	2.00e-87	315.00
IUUC-Mlu-067999	Myotis lucifugus	81.65	3.00e-91	328.00
IUUC-Nfi-068390	Neosartorya fischeri	47.06	1.00e-20	93.60
IUUC-Ncr-068685	Neurospora crassa	36.40	5.00e-34	137.00
IUUC-Nle-069655	Nomascus leucogenys	82.84	2.00e-99	355.00
IUUC-Opr-070234	Ochotona princeps	98.21	1.00e-26	113.00
IUUC-Ont-072484	Oreochromis niloticus	61.09	4.00e-74	271.00
IUUC-Oan-073572	Ornithorhynchus anatinus	52.49	4.00e-88	317.00
IUUC-Ocu-074831	Oryctolagus cuniculus	82.46	9.00e-90	323.00
IUUC-Oba-075392	Oryza barthii	36.76	1.00e-35	143.00
IUUC-Obr-076909	Oryza brachyantha	37.69	9.00e-40	157.00
IUUC-Ogl-077067	Oryza glaberrima	32.86	2.00e-49	189.00
IUUC-Ogu-078883	Oryza glumaepatula	36.76	1.00e-35	144.00
IUUC-Oin-079817	Oryza indica	37.40	1.00e-35	143.00
IUUC-Olo-080929	Oryza longistaminata	36.76	1.00e-35	143.00
IUUC-Ome-081866	Oryza meridionalis	36.76	9.00e-36	144.00
IUUC-Oni-083092	Oryza nivara	37.40	1.00e-35	143.00
IUUC-Opu-083756	Oryza punctata	37.15	7.00e-36	144.00
IUUC-Oru-084816	Oryza rufipogon	37.40	1.00e-35	143.00
IUUC-Osa-086112	Oryza sativa	37.40	1.00e-35	143.00
IUUC-Ola-086540	Oryzias latipes	63.01	8.00e-65	240.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.29	1.00e-42	166.00
IUUC-Oga-088023	Otolemur garnettii	82.59	1.00e-91	329.00
IUUC-Oar-089964	Ovis aries	82.40	3.00e-87	315.00
IUUC-Ptr-091165	Pan troglodytes	84.06	7.00e-93	333.00
IUUC-Pan-092009	Papio anubis	81.55	2.00e-97	348.00
IUUC-Psi-093477	Pelodiscus sinensis	80.51	7.00e-85	306.00
IUUC-Pno-095064	Phaeosphaeria nodorum	45.24	4.00e-14	72.00
IUUC-Ppa-095654	Physcomitrella patens	39.84	5.00e-38	151.00
IUUC-Pfo-097385	Poecilia formosa	63.03	2.00e-72	266.00
IUUC-Pab-097868	Pongo abelii	84.06	3.00e-92	331.00
IUUC-Pop-099642	Populus trichocarpa	38.08	3.00e-42	165.00
IUUC-Pca-100652	Procavia capensis	81.68	2.00e-62	232.00
IUUC-Ppe-101185	Prunus persica	35.83	7.00e-37	147.00
IUUC-Pva-102137	Pteropus vampyrus	84.84	4.00e-92	331.00
IUUC-Pgr-103618	Puccinia graminis	36.19	8.00e-26	110.00
IUUC-Ptt-103717	Puccinia triticina	46.76	4.00e-28	118.00
IUUC-Pte-104303	Pyrenophora teres	49.30	8.00e-21	94.40
IUUC-Pyt-104580	Pyrenophora triticirepentis	49.65	1.00e-20	93.60
IUUC-Rno-104844	Rattus norvegicus	82.22	4.00e-102	364.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.82	1.00e-15	77.40
IUUC-Sha-107073	Sarcophilus harrisii	82.37	1.00e-82	299.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.64	4.00e-39	154.00
IUUC-Spo-108298	Schizosaccharomyces pombe	39.92	2.00e-38	152.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	45.61	1.00e-18	86.70
IUUC-Smo-109129	Selaginella moellendorffii	35.80	5.00e-29	121.00
IUUC-Sit-109813	Setaria italica	36.99	6.00e-38	150.00
IUUC-Sly-111480	Solanum lycopersicum	40.56	2.00e-47	182.00
IUUC-Stu-112054	Solanum tuberosum	40.55	1.00e-44	172.00
IUUC-Sar-112925	Sorex araneus	75.75	2.00e-81	295.00
IUUC-Sbi-114835	Sorghum bicolor	40.88	5.00e-23	101.00
IUUC-Sre-114894	Sporisorium reilianum	50.79	1.00e-11	63.90
IUUC-Ssc-116329	Sus scrofa	83.15	1.00e-92	333.00
IUUC-Tgu-116918	Taeniopygia guttata	86.78	4.00e-145	507.00
IUUC-Tru-118651	Takifugu rubripes	62.66	8.00e-75	273.00
IUUC-Tsy-118836	Tarsius syrichta	89.13	2.00e-47	182.00
IUUC-Tni-120493	Tetraodon nigroviridis	58.75	2.00e-71	262.00
IUUC-Tca-121661	Theobroma cacao	37.01	2.00e-37	149.00
IUUC-Tre-121911	Trichoderma reesei	38.71	2.00e-27	115.00
IUUC-Tvi-122617	Trichoderma virens	45.59	2.00e-16	79.70
IUUC-Tae-125346	Triticum aestivum	36.51	3.00e-37	148.00
IUUC-Tur-126610	Triticum urartu	37.85	2.00e-34	140.00
IUUC-Tme-127092	Tuber melanosporum	49.65	8.00e-23	100.00
IUUC-Tbe-127493	Tupaia belangeri	68.63	1.00e-60	226.00
IUUC-Ttr-128464	Tursiops truncatus	83.15	2.00e-92	332.00
IUUC-Uma-129484	Ustilago maydis	48.28	3.00e-11	62.80
IUUC-Vda-129946	Verticillium dahliae	47.06	2.00e-18	86.30
IUUC-Vpa-130357	Vicugna pacos	79.13	4.00e-58	218.00
IUUC-Vvi-130842	Vitis vinifera	37.94	2.00e-40	159.00
IUUC-Xtr-132679	Xenopus tropicalis	74.22	4.00e-67	248.00
IUUC-Xma-133503	Xiphophorus maculatus	63.75	1.00e-72	266.00
IUUC-Yli-134615	Yarrowia lipolytica	41.40	6.00e-37	147.00
IUUC-Zma-135678	Zea mays	36.47	6.00e-37	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence