iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058280

Ensembl Protein ID

KEH43730

UniProt Accession

A0A072W088; A0A072W088_MEDTR

Genbank Protein ID

KEH43730.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g100737

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g100737	KEH43730	KEH43730

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.20e-10	40.3	123	165

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl df   d ++vlp C+Hvfh  C+ +w       s +++CP+Cr
   Q: 123  CAVCLGDFnnNDKVRVLPqCNHVFHPPCIDAW------LSSHITCPVCR 165
           ********88444*******************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MVNSITHSNL SPIFILLLLL LCNHHYSAKA QPPVQPVSPF APQTTLWDVS SIGVIIGTII 60
ATLILLFLFI TLIRGFTNSL RADSSKCESD KGINPQLLKT FPILLYSTII KHFNESIEDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTAACT CTATTACACA CTCAAATTTG AGTCCCATTT TCATCCTCCT CCTTCTTCTT 60
CTTTGTAACC ATCACTATAG TGCAAAAGCA CAACCTCCAG TACAACCAGT GTCTCCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g100737

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005099	Anolis carolinensis	32.00	2.00e-15	76.30
IUUC-Gac-042488	Gasterosteus aculeatus	34.65	9.00e-15	73.90
IUUC-Ont-071559	Oreochromis niloticus	34.41	2.00e-12	66.60
IUUC-Ola-086879	Oryzias latipes	35.71	5.00e-15	74.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence