iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048078

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01102863

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000001211.2	ENSSTOT00000001212.2	ENSSTOP00000001085.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.40e-81	274.4	111	410

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           Gl+NlgNtC+ N++LQcL+ +p+l++++l+ ++++++++     +  ++++++q  +++ +++   +++p  +++ ++++a++f+  +q
   Q: 111  GLQNLGNTCFANAALQCLTYTPPLANYMLShEHSKTCHA-----EGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQ 194
           9*****************************445555544.....578****************************************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
           +Da+Efl++ +d++++++                  l+ +++ + +++ ++l+ ++F+g l+s++kcl+c+ vs +++p ld++l+++ 
   Q: 195  EDAHEFLQYTVDAMQKAC------------------LNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 265
           ******************..................3344567789999**************************************** PP
   S: 179  keetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
            +     s++++Le+f+k+e+l+gen y+c+kckk + a+k++++++ ++vL+l LkRf    ++    ki k v++p+ Ld++p++++
   Q: 266  AQ-----SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRF----ANFTGGKIAKDVKYPEYLDIRPYMSQ 345
           **.....9***************************************************....668889******************** PP
   S: 268  peekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           p+ +   + +Y L+av+vH+G +++ GHY++y+k ++g W++++Ds V++++  +vl+   ++aYvlfY r
   Q: 346  PNGE---PIIYVLYAVLVHTGfNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLS---QQAYVLFYIR 410
           9977...8**************************************************...********87 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MTIVDKAESS DPSTYQNQPG SSEAVSPGDM DAGSASWGAV SSLNDVSNHT LSLGPVPGAV 60
VYSNSSVPDK SKPSPQKDQA LGDGIAPPQK VLFPSEKICL KWQQTHRVGA GLQNLGNTCF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCATAG TTGACAAAGC TGAATCTTCA GACCCGTCAA CCTATCAGAA TCAGCCTGGC 60
AGTTCTGAGG CAGTCTCACC TGGAGACATG GATGCAGGTT CTGCCAGCTG GGGTGCTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002303	Ailuropoda melanoleuca	77.28	0.00e+00	1540.00
IUUC-Atr-003102	Amborella trichopoda	46.91	3.00e-85	309.00
IUUC-Apl-003459	Anas platyrhynchos	46.39	0.00e+00	829.00
IUUC-Aca-004440	Anolis carolinensis	55.67	0.00e+00	1044.00
IUUC-Ago-007836	Ashbya gossypii	26.44	2.00e-34	140.00
IUUC-Ame-011358	Astyanax mexicanus	70.66	0.00e+00	666.00
IUUC-Bta-012803	Bos taurus	74.22	0.00e+00	1711.00
IUUC-Cja-019199	Callithrix jacchus	75.32	0.00e+00	1665.00
IUUC-Cfa-020597	Canis familiaris	81.27	0.00e+00	1848.00
IUUC-Cpo-021945	Cavia porcellus	78.71	0.00e+00	1896.00
IUUC-Csa-023485	Chlorocebus sabaeus	75.73	0.00e+00	1653.00
IUUC-Cho-024575	Choloepus hoffmanni	65.65	0.00e+00	1261.00
IUUC-Cne-027049	Cryptococcus neoformans	31.86	4.00e-38	152.00
IUUC-Dre-028442	Danio rerio	65.46	0.00e+00	663.00
IUUC-Dno-029673	Dasypus novemcinctus	79.58	0.00e+00	1964.00
IUUC-Dor-030518	Dipodomys ordii	68.83	4.00e-140	492.00
IUUC-Ete-033088	Echinops telfairi	60.61	0.00e+00	1020.00
IUUC-Eca-033579	Equus caballus	80.17	0.00e+00	1858.00
IUUC-Eeu-034511	Erinaceus europaeus	55.88	0.00e+00	985.00
IUUC-Fca-035792	Felis catus	76.06	0.00e+00	1655.00
IUUC-Fal-037075	Ficedula albicollis	45.88	0.00e+00	891.00
IUUC-Gga-040504	Gallus gallus	44.60	0.00e+00	853.00
IUUC-Gma-044075	Glycine max	47.88	4.00e-85	309.00
IUUC-Ggo-044798	Gorilla gorilla	71.82	0.00e+00	1427.00
IUUC-Hsa-046072	Homo sapiens	76.35	0.00e+00	1643.00
IUUC-Hvu-047620	Hordeum vulgare	35.51	2.00e-74	273.00
IUUC-Lch-049867	Latimeria chalumnae	69.34	0.00e+00	965.00
IUUC-Loc-052621	Lepisosteus oculatus	63.80	0.00e+00	694.00
IUUC-Laf-054330	Loxodonta africana	91.95	0.00e+00	1300.00
IUUC-Mcc-054900	Macaca mulatta	96.96	0.00e+00	779.00
IUUC-Meu-056877	Macropus eugenii	55.51	0.00e+00	793.00
IUUC-Mga-059501	Meleagris gallopavo	41.80	0.00e+00	786.00
IUUC-Mvi-060547	Microbotryum violaceum	41.18	7.00e-82	298.00
IUUC-Mmr-060864	Microcebus murinus	80.84	0.00e+00	1941.00
IUUC-Mdo-062395	Monodelphis domestica	66.30	0.00e+00	1639.00
IUUC-Mmu-064236	Mus musculus	72.31	0.00e+00	1680.00
IUUC-Mac-065039	Musa acuminata	46.58	1.00e-85	310.00
IUUC-Mpu-065822	Mustela putorius furo	80.61	0.00e+00	1840.00
IUUC-Mlu-067091	Myotis lucifugus	75.09	0.00e+00	1696.00
IUUC-Nle-069004	Nomascus leucogenys	77.03	0.00e+00	1665.00
IUUC-Opr-071170	Ochotona princeps	63.27	0.00e+00	1193.00
IUUC-Ont-071832	Oreochromis niloticus	60.87	0.00e+00	648.00
IUUC-Oan-073711	Ornithorhynchus anatinus	60.39	0.00e+00	1405.00
IUUC-Ocu-074596	Oryctolagus cuniculus	96.26	0.00e+00	1056.00
IUUC-Oba-075866	Oryza barthii	44.44	7.00e-81	295.00
IUUC-Oni-082339	Oryza nivara	44.63	1.00e-81	298.00
IUUC-Oga-088641	Otolemur garnettii	81.20	0.00e+00	1932.00
IUUC-Oar-089760	Ovis aries	70.87	0.00e+00	1574.00
IUUC-Ptr-091445	Pan troglodytes	76.20	0.00e+00	1656.00
IUUC-Pan-092484	Papio anubis	75.81	0.00e+00	1608.00
IUUC-Psi-093277	Pelodiscus sinensis	57.55	0.00e+00	1207.00
IUUC-Pma-094651	Petromyzon marinus	37.93	1.00e-56	213.00
IUUC-Pfo-096469	Poecilia formosa	66.07	0.00e+00	654.00
IUUC-Pab-097794	Pongo abelii	74.42	0.00e+00	1530.00
IUUC-Ppe-101678	Prunus persica	46.25	4.00e-82	299.00
IUUC-Pva-103238	Pteropus vampyrus	71.18	0.00e+00	1565.00
IUUC-Rno-105068	Rattus norvegicus	73.47	0.00e+00	1712.00
IUUC-Sha-106713	Sarcophilus harrisii	67.19	0.00e+00	1669.00
IUUC-Smo-108763	Selaginella moellendorffii	47.73	4.00e-81	294.00
IUUC-Sit-109895	Setaria italica	44.30	5.00e-83	302.00
IUUC-Sar-113340	Sorex araneus	84.33	0.00e+00	1131.00
IUUC-Tgu-117149	Taeniopygia guttata	46.57	0.00e+00	897.00
IUUC-Tru-117776	Takifugu rubripes	65.36	1.00e-177	616.00
IUUC-Tsy-118974	Tarsius syrichta	77.48	0.00e+00	1854.00
IUUC-Tni-120774	Tetraodon nigroviridis	68.00	2.00e-175	608.00
IUUC-Tca-120936	Theobroma cacao	45.93	2.00e-84	307.00
IUUC-Tbe-128006	Tupaia belangeri	75.47	5.00e-160	558.00
IUUC-Ttr-128764	Tursiops truncatus	66.64	0.00e+00	1467.00
IUUC-Vvi-131535	Vitis vinifera	46.35	1.00e-86	314.00
IUUC-Xtr-132544	Xenopus tropicalis	57.70	0.00e+00	653.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence