iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000042213.16	ENSMUST00000112900.8	ENSMUSP00000108521.3
ENSMUSG00000042213.16	ENSMUST00000036503.12	ENSMUSP00000040057.7

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	miRTarBase	microRNA	TRANSFAC
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	8.60e-15	55.5	54	128

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksg 75
           +++++++l+g+ ++l+v+p + V  +K ki++++gip  qq+Li  + +Ledd  L+dy++ +g+t+ l++ ++g
   Q: 54   MELFIETLTGTCFELRVSPFEAVISVKGKIQRLEGIPICQQHLIWNNMELEDDYCLNDYNISEGCTLKLVLAMRG 128
           789******************************************************************988776 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MFKADLGRIG IQLHTTYSRR IRKVKVMDNR KEPPFFNEDN VGPFYFKLPF YDTMELFIET 60
LTGTCFELRV SPFEAVISVK GKIQRLEGIP ICQQHLIWNN MELEDDYCLN DYNISEGCTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAGGCCGGC GTCTCGGGCG CGCGAACTCC TATCCGCCTG CGGGCAGGCG AGCGAGCGAG 60
CGGGCGGACG CGACCACCGG AGGGCGAGCG GGTGAGGGGC GCGGCGGGGC GGGGCGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR000058--Znf_AN1

PROSITE

PS50053--UBIQUITIN_2
PS51039--ZF_AN1

Pfam

PF00240--ubiquitin
PF01428--zf-AN1

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ
SM00154--ZnF_AN1

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002390	Ailuropoda melanoleuca	79.89	0.00e+00	1113.00
IUUC-Apl-003649	Anas platyrhynchos	65.22	0.00e+00	883.00
IUUC-Aca-004473	Anolis carolinensis	48.65	9.00e-174	603.00
IUUC-Ame-010845	Astyanax mexicanus	47.22	6.00e-157	548.00
IUUC-Bta-012480	Bos taurus	75.61	0.00e+00	1031.00
IUUC-Cpo-022533	Cavia porcellus	80.86	2.00e-96	345.00
IUUC-Csa-023820	Chlorocebus sabaeus	73.16	0.00e+00	996.00
IUUC-Cho-024505	Choloepus hoffmanni	76.94	0.00e+00	1075.00
IUUC-Cin-025250	Ciona intestinalis	63.01	7.00e-53	199.00
IUUC-Csv-025857	Ciona savignyi	62.71	7.00e-55	206.00
IUUC-Dre-027734	Danio rerio	44.74	2.00e-142	499.00
IUUC-Dor-030969	Dipodomys ordii	91.91	3.00e-97	349.00
IUUC-Ete-032468	Echinops telfairi	89.94	2.00e-93	337.00
IUUC-Eca-033298	Equus caballus	87.07	1.00e-136	478.00
IUUC-Eeu-035296	Erinaceus europaeus	70.40	2.00e-142	499.00
IUUC-Fal-037464	Ficedula albicollis	61.94	0.00e+00	869.00
IUUC-Gmo-039287	Gadus morhua	64.98	1.00e-88	320.00
IUUC-Gga-041142	Gallus gallus	63.32	0.00e+00	839.00
IUUC-Gac-041359	Gasterosteus aculeatus	54.55	6.00e-93	335.00
IUUC-Ggo-045168	Gorilla gorilla	72.48	0.00e+00	964.00
IUUC-Hsa-045966	Homo sapiens	72.89	0.00e+00	964.00
IUUC-Itr-049043	Ictidomys tridecemlineatus	79.84	0.00e+00	1087.00
IUUC-Lch-050149	Latimeria chalumnae	54.56	0.00e+00	722.00
IUUC-Loc-052608	Lepisosteus oculatus	53.13	5.00e-167	581.00
IUUC-Mcc-055138	Macaca mulatta	72.31	0.00e+00	850.00
IUUC-Meu-056894	Macropus eugenii	73.63	1.00e-105	377.00
IUUC-Mga-059527	Meleagris gallopavo	63.32	0.00e+00	808.00
IUUC-Mmr-061033	Microcebus murinus	79.54	0.00e+00	1121.00
IUUC-Mdo-062843	Monodelphis domestica	72.63	0.00e+00	1047.00
IUUC-Mpu-066305	Mustela putorius furo	75.82	0.00e+00	1028.00
IUUC-Mlu-068214	Myotis lucifugus	78.10	0.00e+00	1074.00
IUUC-Nle-069991	Nomascus leucogenys	73.57	0.00e+00	981.00
IUUC-Opr-070361	Ochotona princeps	66.25	0.00e+00	822.00
IUUC-Ont-072350	Oreochromis niloticus	53.74	5.00e-90	325.00
IUUC-Oan-073424	Ornithorhynchus anatinus	70.87	3.00e-53	200.00
IUUC-Ocu-073958	Oryctolagus cuniculus	67.06	0.00e+00	886.00
IUUC-Ola-087284	Oryzias latipes	64.34	2.00e-88	320.00
IUUC-Oga-088754	Otolemur garnettii	78.72	0.00e+00	1140.00
IUUC-Oar-089571	Ovis aries	72.05	0.00e+00	854.00
IUUC-Ptr-090558	Pan troglodytes	73.16	0.00e+00	968.00
IUUC-Pan-092164	Papio anubis	72.32	0.00e+00	911.00
IUUC-Psi-094015	Pelodiscus sinensis	65.76	0.00e+00	865.00
IUUC-Pma-094348	Petromyzon marinus	55.59	5.00e-72	265.00
IUUC-Pfo-096743	Poecilia formosa	63.44	5.00e-90	325.00
IUUC-Pab-097914	Pongo abelii	73.16	0.00e+00	988.00
IUUC-Pca-100646	Procavia capensis	67.53	0.00e+00	967.00
IUUC-Rno-105657	Rattus norvegicus	91.25	6.00e-142	496.00
IUUC-Sha-106931	Sarcophilus harrisii	73.00	0.00e+00	1022.00
IUUC-Ssc-116312	Sus scrofa	78.04	0.00e+00	1071.00
IUUC-Tgu-116536	Taeniopygia guttata	62.21	0.00e+00	863.00
IUUC-Tru-118746	Takifugu rubripes	64.36	4.00e-96	345.00
IUUC-Tsy-119588	Tarsius syrichta	77.83	3.00e-155	541.00
IUUC-Tni-120242	Tetraodon nigroviridis	61.81	1.00e-88	320.00
IUUC-Tbe-127677	Tupaia belangeri	68.12	0.00e+00	882.00
IUUC-Xtr-132911	Xenopus tropicalis	55.12	0.00e+00	704.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence