iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000019223.8	ENSRNOT00000064802.3	ENSRNOP00000061946.3
ENSRNOG00000019223.8	ENSRNOT00000041346.4	ENSRNOP00000049879.1
ENSRNOG00000019223.8	ENSRNOT00000025993.4	ENSRNOP00000025993.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.10e-09	37.8	867	914

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C+ C ++++++  ++ C++C++w+H+ C+++      p++ +w+CpkC +
   Q: 867  ICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIM--AAPPEEMQWFCPKCAN 914
           699999999987.7*******************..44444445******86 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MCESYSRSLL RVSVAQICQA LGWDSVQLSA CHLLTDVLQR YLQQLGRGCH RYSELYGRTD 60
PILDDVGEAF QLMGVNLHEL EDYIHNIEPV TFPHQIPSFP VSKNSVLQFP QPGSKDAEER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCAGTGAG CCTCGTCTGC CCGACCTTCA AGGTTCTACC ATGTTCTCGC GGGCGAGTAT 60
TGTCGGGCTG TCGGCCTGCT CCTTGCAGCC GCAATGGTAT GACTACGCCG GGAGGCATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011989--ARM-like
IPR006565--BTP
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF07524--Bromo_TP
PF00628--PHD

SMART

SM00576--BTP
SM00249--PHD

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005669--C:transcription factor TFIID complex
GO:0008270--F:zinc ion binding
GO:0051457--P:maintenance of protein location in nucleus
GO:0043433--P:negative regulation of sequence-specific DNA binding transcription factor activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

KEGG

rno:100360100

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003831	Anas platyrhynchos	73.80	5.00e-83	302.00
IUUC-Bta-012541	Bos taurus	84.30	0.00e+00	888.00
IUUC-Cel-018700	Caenorhabditis elegans	53.06	8.00e-14	73.20
IUUC-Cja-019753	Callithrix jacchus	85.59	8.00e-116	411.00
IUUC-Cfa-021153	Canis familiaris	84.84	0.00e+00	919.00
IUUC-Cpo-022178	Cavia porcellus	83.51	0.00e+00	723.00
IUUC-Csa-023797	Chlorocebus sabaeus	83.73	0.00e+00	905.00
IUUC-Cho-024357	Choloepus hoffmanni	85.30	2.00e-78	287.00
IUUC-Cin-025173	Ciona intestinalis	65.28	1.00e-27	115.00
IUUC-Csv-026292	Ciona savignyi	60.00	2.00e-24	106.00
IUUC-Dno-029644	Dasypus novemcinctus	77.96	5.00e-137	481.00
IUUC-Dme-031631	Drosophila melanogaster	38.17	2.00e-24	108.00
IUUC-Eeu-034542	Erinaceus europaeus	80.73	8.00e-132	464.00
IUUC-Fca-035867	Felis catus	82.58	7.00e-145	508.00
IUUC-Fal-037442	Ficedula albicollis	72.58	6.00e-174	604.00
IUUC-Gga-041093	Gallus gallus	73.30	4.00e-163	568.00
IUUC-Gac-041347	Gasterosteus aculeatus	43.20	5.00e-89	322.00
IUUC-Hsa-047012	Homo sapiens	85.94	0.00e+00	734.00
IUUC-Itr-048120	Ictidomys tridecemlineatus	88.52	0.00e+00	903.00
IUUC-Lch-049593	Latimeria chalumnae	63.13	1.00e-67	251.00
IUUC-Loc-052228	Lepisosteus oculatus	93.51	2.00e-44	171.00
IUUC-Laf-054492	Loxodonta africana	84.30	0.00e+00	758.00
IUUC-Mcc-054754	Macaca mulatta	86.84	0.00e+00	713.00
IUUC-Mmr-061146	Microcebus murinus	88.48	0.00e+00	741.00
IUUC-Mdo-062034	Monodelphis domestica	82.65	0.00e+00	684.00
IUUC-Mmu-063928	Mus musculus	95.61	0.00e+00	1049.00
IUUC-Mpu-066634	Mustela putorius furo	83.93	0.00e+00	702.00
IUUC-Mlu-067116	Myotis lucifugus	82.60	2.00e-176	612.00
IUUC-Nle-069177	Nomascus leucogenys	77.73	0.00e+00	845.00
IUUC-Opr-070692	Ochotona princeps	85.40	3.00e-90	326.00
IUUC-Oan-073680	Ornithorhynchus anatinus	78.55	3.00e-152	532.00
IUUC-Ocu-074944	Oryctolagus cuniculus	87.32	0.00e+00	1015.00
IUUC-Olu-087787	Ostreococcus lucimarinus	39.66	2.00e-07	51.20
IUUC-Oga-088921	Otolemur garnettii	81.88	0.00e+00	998.00
IUUC-Oar-089568	Ovis aries	79.60	6.00e-126	445.00
IUUC-Ptr-090531	Pan troglodytes	84.28	0.00e+00	914.00
IUUC-Pan-092733	Papio anubis	87.17	0.00e+00	716.00
IUUC-Psi-093411	Pelodiscus sinensis	76.56	1.00e-152	533.00
IUUC-Pma-094511	Petromyzon marinus	68.33	4.00e-27	116.00
IUUC-Pfo-096336	Poecilia formosa	54.41	5.00e-94	339.00
IUUC-Pab-098458	Pongo abelii	82.24	0.00e+00	904.00
IUUC-Pva-102128	Pteropus vampyrus	82.43	0.00e+00	701.00
IUUC-Sha-107070	Sarcophilus harrisii	76.33	5.00e-87	315.00
IUUC-Ssc-115657	Sus scrofa	78.37	2.00e-119	423.00
IUUC-Tgu-117228	Taeniopygia guttata	71.69	9.00e-171	594.00
IUUC-Tru-117787	Takifugu rubripes	51.41	3.00e-104	373.00
IUUC-Tni-119879	Tetraodon nigroviridis	44.95	7.00e-107	381.00
IUUC-Tbe-127747	Tupaia belangeri	77.10	0.00e+00	761.00
IUUC-Ttr-128397	Tursiops truncatus	80.00	4.00e-103	369.00
IUUC-Xtr-132570	Xenopus tropicalis	69.60	4.00e-159	555.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence