iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044026

UUCD1 version

UUC-GlM-01336

Ensembl Protein ID

GLYMA05G02240.1

UniProt Accession

I1K010; I1K010_SOYBN

Protein Name

Uncharacterized protein

Gene Name

LOC100807385

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA05G02240	GLYMA05G02240.1	GLYMA05G02240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-56	185.2	540	579
UBD/Beta-Prp	1.70e-110	370.5	414	672

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+ ++++++f   d  +v++s+D+ti++W +++g +lk+
   Q: 540  GHKRGIWSVEFspVDQCVVTASGDKTIRIWAISDGSCLKT 579
           8**********9655889*******************986 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls..........tgkcvhtlkghedsvlsls 101
           s +k+l++tgs+d+++++w+ ++ +++    gh ++v a+ fs++++ ++v+gs+D+t+kvw+++          + k   ++ +h++++ s++
   Q: 414  SSGKTLIVTGSKDNSVRLWESESANCIGVGIGHMGAVGAIAFSKRKQdFFVSGSSDHTLKVWSMDglsdnmtmpiNLKAKAVVAAHDKDINSVA 507
           47899**************************************99888**************8888889888888999999999********** PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkel 195
           + p+++ + sGs+drt+ vw l+    +  +++gh++ +++v+++p ++++v++s D+t+r+W ++ g++l+t++g ht+sv    f   g+++
   Q: 508  VAPNDSLVCSGSQDRTACVWRLPDLVSVV-VFKGHKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFEG-HTSSVLRALFVTRGTQI 599
           *****************************.*********************************************9.***************** PP
   S: 196  vsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlhnssv 267
           vs++ dg vklw ++t+ecv t+  h+d v+ +++ +++e l++g+ D ++++W d++  d   ++ ++++ v
   Q: 600  VSCGADGLVKLWTVKTNECVATYDHHEDKVWALAVGRKTEKLATGGGDAVVNLWfDSTAADKEEAFRKEEEGV 672
           ***************************************************************9999987544 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEPLRLKTNY RCVPALQQFY TGGPFVVSSD SSFIACACGE SIKIVDSATA AIRSTLGADS 60
ESFTALALSP DDRLLFSSGH SRQIKVWDLS TLKCVRSWKG HEGPVMCMTC HPSGGLLATG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAACTGAA AGCAAAACAA AACCCTGCTC CTTAAACCAT AAACCCTAAG CAACTGTCTT 60
CAAATCACAG GAGCGGCAGT TTCCCAATGG AACCCCTCCG ACTGAAGACC AACTACCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	60.58	0.00e+00	992.00
IUUC-Aml-002376	Ailuropoda melanoleuca	38.67	3.00e-156	545.00
IUUC-Atr-002486	Amborella trichopoda	64.78	0.00e+00	1110.00
IUUC-Apl-003519	Anas platyrhynchos	37.40	2.00e-139	489.00
IUUC-Aca-004363	Anolis carolinensis	34.66	9.00e-75	274.00
IUUC-Aly-006152	Arabidopsis lyrata	70.22	0.00e+00	1179.00
IUUC-Ath-006966	Arabidopsis thaliana	69.26	0.00e+00	1171.00
IUUC-Ang-009640	Aspergillus niger	30.86	1.00e-115	410.00
IUUC-Ate-010320	Aspergillus terreus	31.10	3.00e-113	403.00
IUUC-Ame-010930	Astyanax mexicanus	41.46	2.00e-38	152.00
IUUC-Bgr-012054	Blumeria graminis	30.43	2.00e-101	363.00
IUUC-Bdi-014384	Brachypodium distachyon	63.81	0.00e+00	1111.00
IUUC-Bol-015097	Brassica oleracea	68.64	0.00e+00	1152.00
IUUC-Bra-017798	Brassica rapa	68.86	0.00e+00	1158.00
IUUC-Cja-019092	Callithrix jacchus	38.68	4.00e-158	551.00
IUUC-Cfa-021040	Canis familiaris	38.59	3.00e-161	561.00
IUUC-Cpo-022529	Cavia porcellus	38.43	3.00e-149	522.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	65.69	1.00e-53	201.00
IUUC-Csa-024205	Chlorocebus sabaeus	38.85	2.00e-160	560.00
IUUC-Cin-025560	Ciona intestinalis	35.80	4.00e-151	528.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	28.63	1.00e-108	387.00
IUUC-Dre-028138	Danio rerio	38.62	3.00e-155	542.00
IUUC-Dno-029914	Dasypus novemcinctus	36.50	1.00e-107	384.00
IUUC-Dse-031429	Dothistroma septosporum	29.84	2.00e-112	400.00
IUUC-Dme-031995	Drosophila melanogaster	29.22	7.00e-95	342.00
IUUC-Eeu-034832	Erinaceus europaeus	40.73	2.00e-94	340.00
IUUC-Fca-036136	Felis catus	33.53	2.00e-115	409.00
IUUC-Fal-036859	Ficedula albicollis	39.05	1.00e-165	576.00
IUUC-Fox-037863	Fusarium oxysporum	28.88	8.00e-95	341.00
IUUC-Gmo-038711	Gadus morhua	35.87	2.00e-143	503.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.69	3.00e-101	363.00
IUUC-Gga-040263	Gallus gallus	37.97	1.00e-161	563.00
IUUC-Gac-041291	Gasterosteus aculeatus	38.79	7.00e-167	581.00
IUUC-Ggo-044693	Gorilla gorilla	39.03	5.00e-160	558.00
IUUC-Hsa-046048	Homo sapiens	38.91	3.00e-159	555.00
IUUC-Hvu-047608	Hordeum vulgare	65.33	0.00e+00	1097.00
IUUC-Kpa-049209	Komagataella pastoris	32.02	5.00e-116	412.00
IUUC-Lch-050085	Latimeria chalumnae	38.67	8.00e-154	537.00
IUUC-Lpe-050945	Leersia perrieri	64.88	0.00e+00	1069.00
IUUC-Loc-052679	Lepisosteus oculatus	41.15	0.00e+00	639.00
IUUC-Laf-053685	Loxodonta africana	37.58	3.00e-143	502.00
IUUC-Mcc-055861	Macaca mulatta	38.85	1.00e-158	553.00
IUUC-Meu-056820	Macropus eugenii	34.50	1.00e-113	404.00
IUUC-Mor-057234	Magnaporthe oryzae	28.91	2.00e-98	353.00
IUUC-Mpo-057456	Magnaporthe poae	28.83	5.00e-76	278.00
IUUC-Mtr-058122	Medicago truncatula	83.70	0.00e+00	1550.00
IUUC-Mga-060080	Meleagris gallopavo	37.68	8.00e-159	554.00
IUUC-Mmr-060762	Microcebus murinus	38.13	7.00e-154	538.00
IUUC-Mdo-061975	Monodelphis domestica	38.60	9.00e-156	544.00
IUUC-Mmu-064038	Mus musculus	38.31	9.00e-153	534.00
IUUC-Mac-065189	Musa acuminata	63.44	0.00e+00	1154.00
IUUC-Mpu-066526	Mustela putorius furo	38.90	2.00e-151	530.00
IUUC-Mlu-067716	Myotis lucifugus	38.10	1.00e-166	580.00
IUUC-Ncr-068826	Neurospora crassa	27.34	9.00e-99	355.00
IUUC-Nle-069832	Nomascus leucogenys	38.55	2.00e-160	560.00
IUUC-Opr-071183	Ochotona princeps	37.82	6.00e-148	518.00
IUUC-Ont-072371	Oreochromis niloticus	39.51	4.00e-170	592.00
IUUC-Oan-073491	Ornithorhynchus anatinus	36.70	3.00e-129	455.00
IUUC-Oba-075963	Oryza barthii	64.86	0.00e+00	1097.00
IUUC-Obr-076173	Oryza brachyantha	66.30	0.00e+00	1088.00
IUUC-Ogl-077692	Oryza glaberrima	64.73	0.00e+00	1093.00
IUUC-Ogu-078965	Oryza glumaepatula	64.86	0.00e+00	1097.00
IUUC-Oin-079708	Oryza indica	64.61	0.00e+00	1093.00
IUUC-Olo-080679	Oryza longistaminata	64.98	0.00e+00	1092.00
IUUC-Oni-082960	Oryza nivara	64.49	0.00e+00	1092.00
IUUC-Opu-083282	Oryza punctata	63.82	0.00e+00	1062.00
IUUC-Oru-085224	Oryza rufipogon	64.61	0.00e+00	1093.00
IUUC-Osa-085320	Oryza sativa	64.61	0.00e+00	1093.00
IUUC-Ola-086370	Oryzias latipes	33.46	3.00e-77	283.00
IUUC-Olu-087814	Ostreococcus lucimarinus	34.51	1.00e-124	441.00
IUUC-Oar-090032	Ovis aries	36.66	4.00e-111	395.00
IUUC-Ptr-090749	Pan troglodytes	39.27	4.00e-160	558.00
IUUC-Pan-091691	Papio anubis	37.29	5.00e-148	518.00
IUUC-Psi-093200	Pelodiscus sinensis	38.24	1.00e-161	563.00
IUUC-Pma-094165	Petromyzon marinus	36.54	4.00e-111	395.00
IUUC-Ppa-095336	Physcomitrella patens	55.76	0.00e+00	907.00
IUUC-Pab-097855	Pongo abelii	38.79	3.00e-160	558.00
IUUC-Pop-099434	Populus trichocarpa	69.43	0.00e+00	1179.00
IUUC-Ppe-101665	Prunus persica	71.31	0.00e+00	1228.00
IUUC-Pva-102178	Pteropus vampyrus	39.63	5.00e-159	555.00
IUUC-Ptt-103808	Puccinia triticina	29.43	3.00e-79	290.00
IUUC-Pte-104205	Pyrenophora teres	31.91	8.00e-112	398.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	31.57	7.00e-104	371.00
IUUC-Rno-105617	Rattus norvegicus	38.90	1.00e-154	540.00
IUUC-Sha-107378	Sarcophilus harrisii	38.66	1.00e-155	543.00
IUUC-Smo-109257	Selaginella moellendorffii	53.34	0.00e+00	889.00
IUUC-Sit-110258	Setaria italica	64.67	0.00e+00	1131.00
IUUC-Sly-111521	Solanum lycopersicum	67.93	0.00e+00	1148.00
IUUC-Stu-112718	Solanum tuberosum	78.83	5.00e-58	215.00
IUUC-Sar-113586	Sorex araneus	36.08	9.00e-19	88.60
IUUC-Sbi-114768	Sorghum bicolor	64.19	0.00e+00	1113.00
IUUC-Sre-115159	Sporisorium reilianum	32.47	2.00e-99	357.00
IUUC-Ssc-116342	Sus scrofa	29.71	2.00e-73	270.00
IUUC-Tgu-117320	Taeniopygia guttata	37.67	7.00e-150	524.00
IUUC-Tni-119971	Tetraodon nigroviridis	38.76	3.00e-165	575.00
IUUC-Tca-121248	Theobroma cacao	74.58	0.00e+00	1220.00
IUUC-Tre-122079	Trichoderma reesei	28.49	2.00e-102	367.00
IUUC-Tvi-122554	Trichoderma virens	28.71	1.00e-103	371.00
IUUC-Tae-123690	Triticum aestivum	65.30	0.00e+00	1105.00
IUUC-Tur-126436	Triticum urartu	61.36	0.00e+00	889.00
IUUC-Tme-126942	Tuber melanosporum	33.49	8.00e-117	414.00
IUUC-Ttr-128964	Tursiops truncatus	38.16	2.00e-154	539.00
IUUC-Vda-129749	Verticillium dahliae	29.67	2.00e-96	346.00
IUUC-Vvi-131511	Vitis vinifera	72.55	0.00e+00	1258.00
IUUC-Xtr-132816	Xenopus tropicalis	34.05	3.00e-135	476.00
IUUC-Zma-135559	Zea mays	62.50	0.00e+00	1083.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence