iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112613

Ensembl Protein ID

PGSC0003DMT400028711

UniProt Accession

M1ARJ8; M1ARJ8_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400011048	PGSC0003DMT400028709	PGSC0003DMT400028709
PGSC0003DMG400011048	PGSC0003DMT400028711	PGSC0003DMT400028711
PGSC0003DMG400011048	PGSC0003DMT400028712	PGSC0003DMT400028712
PGSC0003DMG400011048	PGSC0003DMT400028713	PGSC0003DMT400028713

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	44.00	3.00e-06	50.40	IUUC-Hsa-046902

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MANNSTPTDA SSKKIRKPYT ITKSRESWTE EEHDKFLEAL QLFDRDWKKI EDFVGSKTVI 60
QIRSHAQKYF LKVQKNGSIA HVPPPRPKRK AAHPYPQKAP KNVLVPLQAS MGYPSSMNSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTAAATCGG CGTAGACCAC TAGTGCTAGA TCTGCCGATT AATTGTCTGG CTTCTATTGA 60
TTTGCCCAGA CAGTAATGCC CAACACCCCG CCCAAAATTA CCCACTCCAC CCCACCCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR009057--Homeobox-like
IPR017930--Myb_dom
IPR006447--Myb_dom_plants
IPR001005--SANT/Myb

PROSITE

PS51294--HTH_MYB

Pfam

PF00249--Myb_DNA-binding

SMART

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005879	Arabidopsis lyrata	56.42	2.00e-60	224.00
IUUC-Ath-006818	Arabidopsis thaliana	54.69	2.00e-58	217.00
IUUC-Bol-015375	Brassica oleracea	63.08	3.00e-62	230.00
IUUC-Bra-017353	Brassica rapa	52.01	6.00e-56	209.00
IUUC-Cre-022774	Chlamydomonas reinhardtii	40.00	5.00e-09	54.70
IUUC-Cho-024724	Choloepus hoffmanni	44.19	5.00e-07	48.90
IUUC-Cme-027237	Cyanidioschyzon merolae	37.63	1.00e-12	67.00
IUUC-Dre-028234	Danio rerio	37.93	2.00e-08	53.10
IUUC-Gmo-039445	Gadus morhua	42.86	2.00e-07	50.10
IUUC-Gma-043648	Glycine max	70.32	2.00e-103	367.00
IUUC-Ggo-044894	Gorilla gorilla	37.88	4.00e-08	52.80
IUUC-Hsa-046902	Homo sapiens	37.88	4.00e-08	52.80
IUUC-Hvu-047369	Hordeum vulgare	42.31	4.00e-07	47.40
IUUC-Mla-059041	Melampsora laricipopulina	36.84	3.90e+00	25.00
IUUC-Nle-069917	Nomascus leucogenys	39.39	3.00e-08	53.10
IUUC-Opr-070449	Ochotona princeps	46.51	2.00e-07	50.10
IUUC-Ocu-073867	Oryctolagus cuniculus	41.07	2.00e-07	49.70
IUUC-Ptr-091260	Pan troglodytes	37.88	4.00e-08	52.80
IUUC-Pma-094538	Petromyzon marinus	32.56	9.00e-05	39.70
IUUC-Pop-099207	Populus trichocarpa	72.43	7.00e-116	409.00
IUUC-Pca-100438	Procavia capensis	41.67	4.00e-08	52.80
IUUC-Ppe-101933	Prunus persica	63.64	5.00e-80	289.00
IUUC-Sly-111876	Solanum lycopersicum	55.22	6.00e-61	226.00
IUUC-Sre-115088	Sporisorium reilianum	33.33	2.00e-03	37.70
IUUC-Vvi-131499	Vitis vinifera	54.92	4.00e-64	237.00

Created Date

25-Jun-2017