iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-061967

Ensembl Protein ID

ENSMODP00000018210.5

UniProt Accession

F7ASD0; F7ASD0_MONDO

Protein Name

Uncharacterized protein

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000014579.5	ENSMODT00000018542.5	ENSMODP00000018210.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.70e-19	68.8	201	238
ULD/UDP/UBQ/UBQ_PIM	2.70e-27	94.7	10	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 201  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 238
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m++t+ktl++++f++++++++tv++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 10   MQITLKTLQQQTFKIDIDPEETVKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 87
           99*************************************************************************997 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MASGGGGDTM QITLKTLQQQ TFKIDIDPEE TVKALKEKIE SEKGKDAFPV AGQKLIYAGK 60
ILNDDTALKE YKIDEKNFVV VMVTKPKAAA TSAPSPATTQ QSIPATTSTV SSSTAASVAQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCCG GGGGCGGCGG CGACACCATG CAGATCACTC TGAAGACCCT CCAGCAACAG 60
ACCTTCAAGA TCGACATCGA CCCTGAGGAG ACGGTACGGA GGGGAGGGCC GCCCGCGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	84.06	4.00e-90	325.00
IUUC-Apl-003371	Anas platyrhynchos	81.65	4.00e-94	338.00
IUUC-Aca-004599	Anolis carolinensis	83.04	7.00e-90	323.00
IUUC-Ago-007830	Ashbya gossypii	55.38	1.00e-14	74.30
IUUC-Ame-011107	Astyanax mexicanus	68.63	3.00e-33	136.00
IUUC-Bta-012922	Bos taurus	89.14	8.00e-89	320.00
IUUC-Cja-018772	Callithrix jacchus	90.64	8.00e-95	340.00
IUUC-Cfa-020683	Canis familiaris	82.77	1.00e-96	346.00
IUUC-Cpo-022145	Cavia porcellus	86.86	4.00e-92	331.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	35.94	2.00e-29	123.00
IUUC-Csa-023714	Chlorocebus sabaeus	89.09	3.00e-106	378.00
IUUC-Cho-024814	Choloepus hoffmanni	66.55	4.00e-73	268.00
IUUC-Csv-025823	Ciona savignyi	66.22	2.00e-24	105.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	50.67	3.00e-16	79.30
IUUC-Cne-027056	Cryptococcus neoformans	48.72	1.00e-15	77.40
IUUC-Dre-028369	Danio rerio	71.09	3.00e-81	295.00
IUUC-Dno-029543	Dasypus novemcinctus	89.51	1.00e-94	340.00
IUUC-Ete-032583	Echinops telfairi	78.81	1.00e-62	233.00
IUUC-Eca-034243	Equus caballus	91.10	3.00e-88	318.00
IUUC-Eeu-034721	Erinaceus europaeus	86.30	1.00e-69	256.00
IUUC-Fca-035679	Felis catus	87.27	2.00e-91	329.00
IUUC-Fal-037148	Ficedula albicollis	80.65	1.00e-87	316.00
IUUC-Gga-040544	Gallus gallus	77.34	5.00e-96	344.00
IUUC-Ggo-045125	Gorilla gorilla	91.63	8.00e-97	347.00
IUUC-Hsa-046519	Homo sapiens	91.63	8.00e-97	347.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	84.64	9.00e-85	306.00
IUUC-Kpa-049314	Komagataella pastoris	36.55	6.00e-29	121.00
IUUC-Lch-050553	Latimeria chalumnae	73.61	3.00e-73	269.00
IUUC-Loc-051748	Lepisosteus oculatus	74.26	9.00e-74	270.00
IUUC-Lma-053328	Leptosphaeria maculans	50.00	1.00e-13	67.40
IUUC-Laf-054293	Loxodonta africana	89.14	4.00e-93	334.00
IUUC-Mcc-055600	Macaca mulatta	89.89	6.00e-103	367.00
IUUC-Meu-056082	Macropus eugenii	69.45	1.00e-72	266.00
IUUC-Mga-060060	Meleagris gallopavo	47.69	1.00e-15	77.40
IUUC-Mmr-061759	Microcebus murinus	86.94	3.00e-88	318.00
IUUC-Mmu-063258	Mus musculus	86.08	2.00e-99	355.00
IUUC-Mpu-066389	Mustela putorius furo	84.46	1.00e-90	326.00
IUUC-Mlu-067999	Myotis lucifugus	87.36	8.00e-91	327.00
IUUC-Ncr-068685	Neurospora crassa	45.11	4.00e-24	105.00
IUUC-Nle-069655	Nomascus leucogenys	89.89	2.00e-103	369.00
IUUC-Opr-070234	Ochotona princeps	98.21	2.00e-26	112.00
IUUC-Ocu-074831	Oryctolagus cuniculus	91.04	1.00e-91	329.00
IUUC-Oin-079203	Oryza indica	32.31	2.00e-49	189.00
IUUC-Osa-085951	Oryza sativa	32.31	2.00e-49	189.00
IUUC-Ola-086540	Oryzias latipes	63.71	2.00e-62	233.00
IUUC-Oga-088023	Otolemur garnettii	91.48	4.00e-95	341.00
IUUC-Oar-089964	Ovis aries	88.01	4.00e-88	318.00
IUUC-Ptr-091165	Pan troglodytes	91.63	1.00e-96	346.00
IUUC-Pan-092009	Papio anubis	88.52	2.00e-101	362.00
IUUC-Psi-093477	Pelodiscus sinensis	86.25	3.00e-88	318.00
IUUC-Pno-095064	Phaeosphaeria nodorum	48.68	9.00e-15	74.70
IUUC-Pfo-097385	Poecilia formosa	62.18	4.00e-69	254.00
IUUC-Pab-097868	Pongo abelii	91.63	4.00e-96	344.00
IUUC-Pca-100652	Procavia capensis	90.50	1.00e-65	243.00
IUUC-Pva-102137	Pteropus vampyrus	90.98	6.00e-93	334.00
IUUC-Rno-104844	Rattus norvegicus	86.76	9.00e-100	357.00
IUUC-Sha-107073	Sarcophilus harrisii	97.43	2.00e-114	405.00
IUUC-Sar-112925	Sorex araneus	78.73	3.00e-84	305.00
IUUC-Sre-114894	Sporisorium reilianum	53.45	5.00e-11	62.40
IUUC-Ssc-116329	Sus scrofa	88.76	2.00e-93	336.00
IUUC-Tgu-116918	Taeniopygia guttata	80.31	9.00e-90	323.00
IUUC-Tru-118651	Takifugu rubripes	60.74	2.00e-70	259.00
IUUC-Tsy-118836	Tarsius syrichta	92.65	5.00e-47	181.00
IUUC-Tbe-127493	Tupaia belangeri	75.19	2.00e-64	239.00
IUUC-Ttr-128464	Tursiops truncatus	88.76	2.00e-93	335.00
IUUC-Uma-129484	Ustilago maydis	47.54	1.00e-11	64.70
IUUC-Vpa-130357	Vicugna pacos	83.48	2.00e-60	226.00
IUUC-Xtr-132679	Xenopus tropicalis	79.77	2.00e-68	253.00
IUUC-Xma-133503	Xiphophorus maculatus	54.22	5.00e-102	364.00
IUUC-Yli-134615	Yarrowia lipolytica	41.67	4.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence